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Author: Avi Srivastava

Rankings

  • All-time downloads: 27,482 (rank: 1,513 out of 364,124)
  • Categories:
    • bioinformatics: 27,482 (rank: 82 out of 31,506)

Downloads per author, site-wide

Preprints

RapMap: A Rapid, Sensitive and Accurate Tool for Mapping RNA-seq Reads to Transcriptomes

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  • Downloaded 12,657 times
  • Download rankings, all-time:
    • Site-wide: 144 out of 84,617
    • In bioinformatics: 19 out of 8,114
  • Year to date:
    • Site-wide: 591 out of 84,617
  • Since beginning of last month:
    • Site-wide: 1,575 out of 84,617

Bioconda: A sustainable and comprehensive software distribution for the life sciences

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  • Downloaded 5,125 times
  • Download rankings, all-time:
    • Site-wide: 655 out of 84,617
    • In bioinformatics: 113 out of 8,114
  • Year to date:
    • Site-wide: 3,470 out of 84,617
  • Since beginning of last month:
    • Site-wide: 2,928 out of 84,617

Alignment and mapping methodology influence transcript abundance estimation

bioinformatics more details view paper
  • Downloaded 3,895 times
  • Download rankings, all-time:
    • Site-wide: 1,088 out of 84,617
    • In bioinformatics: 189 out of 8,114
  • Year to date:
    • Site-wide: 772 out of 84,617
  • Since beginning of last month:
    • Site-wide: 1,119 out of 84,617

Alevin efficiently estimates accurate gene abundances from dscRNA-seq data

bioinformatics more details view paper
  • Downloaded 2,478 times
  • Download rankings, all-time:
    • Site-wide: 2,388 out of 84,617
    • In bioinformatics: 444 out of 8,114
  • Year to date:
    • Site-wide: 14,904 out of 84,617
  • Since beginning of last month:
    • Site-wide: 16,053 out of 84,617

Nonparametric expression analysis using inferential replicate counts

bioinformatics more details view paper
  • Downloaded 1,420 times
  • Download rankings, all-time:
    • Site-wide: 5,997 out of 84,617
    • In bioinformatics: 1,082 out of 8,114
  • Year to date:
    • Site-wide: 10,943 out of 84,617
  • Since beginning of last month:
    • Site-wide: 11,504 out of 84,617

Preprocessing choices affect RNA velocity results for droplet scRNA-seq data

bioinformatics more details view paper
  • Downloaded 1,150 times
  • Download rankings, all-time:
    • Site-wide: 8,576 out of 84,617
    • In bioinformatics: 1,456 out of 8,114
  • Year to date:
    • Site-wide: 830 out of 84,617
  • Since beginning of last month:
    • Site-wide: 903 out of 84,617

Terminus enables the discovery of data-driven, robust transcript groups from RNA-seq data

bioinformatics more details view paper
  • Downloaded 512 times
  • Download rankings, all-time:
    • Site-wide: 28,574 out of 84,617
    • In bioinformatics: 3,803 out of 8,114
  • Year to date:
    • Site-wide: 2,735 out of 84,617
  • Since beginning of last month:
    • Site-wide: 1,062 out of 84,617

A Bayesian framework for inter-cellular information sharing improves dscRNA-seq quantification

bioinformatics more details view paper
  • Downloaded 245 times
  • Download rankings, all-time:
    • Site-wide: 58,273 out of 84,617
    • In bioinformatics: 6,272 out of 8,114
  • Year to date:
    • Site-wide: 8,642 out of 84,617
  • Since beginning of last month:
    • Site-wide: 2,621 out of 84,617

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