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Author: Orit Rozenblatt-Rosen

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  • All-time downloads: 89,082 (rank: 1,166 out of 509,977)
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    • bioinformatics: 1,573 (rank: 8,044 (tie) out of 36,842)
    • cancer biology: 10,491 (rank: 165 out of 31,483)
    • cell biology: 12,435 (rank: 184 (tie) out of 33,913)
    • developmental biology: 3,344 (rank: 400 (tie) out of 17,402)
    • genomics: 53,736 (rank: 125 out of 45,520)
    • immunology: 4,164 (rank: 1,300 out of 27,756)
    • neuroscience: 3,339 (rank: 5,141 (tie) out of 73,625)

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Preprints

Massively parallel phenotyping of variant impact in cancer with Perturb-seq reveals a shift in the spectrum of cell states induced by somatic mutations

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Systematic comparative analysis of single cell RNA-sequencing methods

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The Human Cell Atlas

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A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

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DroNc-Seq: Deciphering cell types in human archived brain tissues by massively-parallel single nucleus RNA-seq

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Expansion Sequencing: Spatially Precise In Situ Transcriptomics in Intact Biological Systems

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The enteric nervous system of the human and mouse colon at a single-cell resolution

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Rewiring of the cellular and inter-cellular landscape of the human colon during ulcerative colitis

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Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

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Pan-cancer single cell RNA-seq uncovers recurring programs of cellular heterogeneity

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    • In cancer biology: 38 out of 3,745
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Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

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A cellular and spatial map of the choroid plexus across brain ventricles and ages

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Single-nucleus and spatial transcriptomics of archival pancreatic cancer reveals multi-compartment reprogramming after neoadjuvant treatment

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T helper cells modulate intestinal stem cell renewal and differentiation

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Multiplexed single-cell profiling of post-perturbation transcriptional responses to define cancer vulnerabilities and therapeutic mechanism of action

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    • In cancer biology: 103 out of 3,745
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Longitudinal single cell profiling of regulatory T cells identifies IL-33 as a driver of tumor immunosuppression

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Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq

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Acquired FGFR and FGF alterations confer resistance to estrogen receptor (ER) targeted therapy in ER+ metastatic breast cancer

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Opposing immune and genetic forces shape oncogenic programs in synovial sarcoma

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SM-Omics: An automated platform for high-throughput spatial multi-omics

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Multi-modal pooled Perturb-CITE-Seq screens in patient models define novel mechanisms of cancer immune evasion

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Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors.

immunology more details view paper
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An endogenous glucocorticoid-cytokine signaling circuit promotes CD8+ T cell dysfunction in the tumor microenvironment

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Transcriptional mediators of treatment resistance in lethal prostate cancer

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RAAS blockade, kidney disease, and expression of ACE2, the entry receptor for SARS-CoV-2, in kidney epithelial and endothelial cells

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