Rxivist logo

Author: Jeroen de Ridder

  • ORCiD: http://orcid.org/0000-0002-0828-3477
  • Most recently observed institution: Center for Molecular Medicine, University Medical Center Utrecht and Utrecht University, Utrecht, The Netherlands & Oncode Institute, Utrecht, The Netherlands

Rankings

  • All-time downloads: 14,626 (rank: 5,633 (tie) out of 428,374)
  • Categories:
    • bioinformatics: 1,851 (rank: 6,708 (tie) out of 36,286)
    • cancer biology: 4,264 (rank: 561 out of 30,550)
    • genetics: 1,611 (rank: 9,852 out of 38,071)
    • genomics: 6,900 (rank: 2,662 out of 44,724)

Downloads per author, site-wide

Preprints

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,458 times
  • Download rankings, all-time:
    • Site-wide: 1,084 out of 101,416
    • In genomics: 216 out of 6,281
  • Year to date:
    • Site-wide: 14,819 out of 101,416
  • Since beginning of last month:
    • Site-wide: 11,539 out of 101,416

A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations

cancer biology more details view paper
  • Downloaded 3,108 times
  • Download rankings, all-time:
    • Site-wide: 2,042 out of 101,416
    • In cancer biology: 50 out of 3,636
  • Year to date:
    • Site-wide: 12,844 out of 101,416
  • Since beginning of last month:
    • Site-wide: 36,845 out of 101,416

Mapping And Phasing Of Structural Variation In Patient Genomes Using Nanopore Sequencing

genomics more details view paper
  • Downloaded 2,442 times
  • Download rankings, all-time:
    • Site-wide: 3,036 out of 101,416
    • In genomics: 552 out of 6,281
  • Year to date:
    • Site-wide: 64,241 out of 101,416
  • Since beginning of last month:
    • Site-wide: 61,380 out of 101,416

Locus-Specific Enhancer Hubs And Architectural Loop Collisions Uncovered From Single Allele DNA Topologies

genetics more details view paper
  • Downloaded 1,437 times
  • Download rankings, all-time:
    • Site-wide: 7,348 out of 101,416
    • In genetics: 504 out of 5,038
  • Year to date:
    • Site-wide: 58,893 out of 101,416
  • Since beginning of last month:
    • Site-wide: 41,088 out of 101,416

MetaboShiny – interactive processing, analysis and annotation of direct infusion metabolomics data

bioinformatics more details view paper
  • Downloaded 850 times
  • Download rankings, all-time:
    • Site-wide: 17,391 out of 101,416
    • In bioinformatics: 2,605 out of 9,295
  • Year to date:
    • Site-wide: 8,444 out of 101,416
  • Since beginning of last month:
    • Site-wide: 14,622 out of 101,416

Mining the forest: uncovering biological mechanisms by interpreting Random Forests

bioinformatics more details view paper
  • Downloaded 674 times
  • Download rankings, all-time:
    • Site-wide: 24,677 out of 101,416
    • In bioinformatics: 3,400 out of 9,295
  • Year to date:
    • Site-wide: 41,967 out of 101,416
  • Since beginning of last month:
    • Site-wide: 37,367 out of 101,416

Accurate detection of circulating tumor DNA using nanopore consensus sequencing

cancer biology more details view paper
  • Downloaded 629 times
  • Download rankings, all-time:
    • Site-wide: 27,135 out of 101,416
    • In cancer biology: 853 out of 3,636
  • Year to date:
    • Site-wide: 5,348 out of 101,416
  • Since beginning of last month:
    • Site-wide: 3,170 out of 101,416

Molecular Heterogeneity and Early Metastatic Clone Selection in Testicular Germ Cell Cancer Development

cancer biology more details view paper
  • Downloaded 527 times
  • Download rankings, all-time:
    • Site-wide: 34,221 out of 101,416
    • In cancer biology: 1,100 out of 3,636
  • Year to date:
    • Site-wide: 39,330 out of 101,416
  • Since beginning of last month:
    • Site-wide: 19,358 out of 101,416

A data-driven interactome of synergistic genes improves network based cancer outcome prediction

bioinformatics more details view paper
  • Downloaded 327 times
  • Download rankings, all-time:
    • Site-wide: 57,100 out of 101,416
    • In bioinformatics: 6,322 out of 9,295
  • Year to date:
    • Site-wide: 87,164 out of 101,416
  • Since beginning of last month:
    • Site-wide: 83,992 out of 101,416

Alternate approach to stroke phenotyping identifies a genetic risk locus for small vessel stroke

genetics more details view paper
  • Downloaded 174 times
  • Download rankings, all-time:
    • Site-wide: 83,363 out of 101,416
    • In genetics: 4,364 out of 5,038
  • Year to date:
    • Site-wide: 81,932 out of 101,416
  • Since beginning of last month:
    • Site-wide: 82,531 out of 101,416
PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)

News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
  • 13 Jan 2019: The Rxivist preprint is live!