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Author: Gad A. Getz

Rankings

  • All-time downloads: 121,956 (rank: 245 out of 426,228)
  • Categories:
    • bioinformatics: 13,703 (rank: 382 out of 36,218)
    • cancer biology: 52,073 (rank: 15 out of 30,434)
    • genetics: 10,118 (rank: 1,406 out of 38,003)
    • genomics: 46,062 (rank: 147 out of 44,644)

Downloads per author, site-wide

Preprints

Analysis of protein-coding genetic variation in 60,706 humans

genomics more details view paper
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    • In genomics: 10 out of 6,255
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    • Site-wide: 18,683 out of 100,904
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    • Site-wide: 23,779 out of 100,904

The Repertoire of Mutational Signatures in Human Cancer

cancer biology more details view paper
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    • Site-wide: 106 out of 100,904
    • In cancer biology: 2 out of 3,615
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    • Site-wide: 433 out of 100,904
  • Since beginning of last month:
    • Site-wide: 794 out of 100,904

The evolutionary history of 2,658 cancers

cancer biology more details view paper
  • Downloaded 9,346 times
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    • In cancer biology: 8 out of 3,615
  • Year to date:
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    • Site-wide: 16,531 out of 100,904

The GTEx Consortium atlas of genetic regulatory effects across human tissues

genetics more details view paper
  • Downloaded 7,530 times
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    • In genetics: 31 out of 5,022
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    • Site-wide: 418 out of 100,904

The whole-genome panorama of cancer drivers

cancer biology more details view paper
  • Downloaded 6,311 times
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    • Site-wide: 597 out of 100,904
    • In cancer biology: 13 out of 3,615
  • Year to date:
    • Site-wide: 3,126 out of 100,904
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    • Site-wide: 5,441 out of 100,904

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

bioinformatics more details view paper
  • Downloaded 6,311 times
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    • In bioinformatics: 85 out of 9,264
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    • Site-wide: 10,187 out of 100,904

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

genomics more details view paper
  • Downloaded 5,224 times
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    • Site-wide: 813 out of 100,904
    • In genomics: 159 out of 6,255
  • Year to date:
    • Site-wide: 5,741 out of 100,904
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    • Site-wide: 12,010 out of 100,904

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

cancer biology more details view paper
  • Downloaded 5,196 times
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    • In cancer biology: 22 out of 3,615
  • Year to date:
    • Site-wide: 1,992 out of 100,904
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    • Site-wide: 3,686 out of 100,904

Calling Somatic SNVs and Indels with Mutect2

bioinformatics more details view paper
  • Downloaded 3,523 times
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    • Site-wide: 1,614 out of 100,904
    • In bioinformatics: 268 out of 9,264
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    • Site-wide: 473 out of 100,904
  • Since beginning of last month:
    • Site-wide: 464 out of 100,904

Tumor mutational landscape is a record of the pre-malignant state

genomics more details view paper
  • Downloaded 3,322 times
  • Download rankings, all-time:
    • Site-wide: 1,798 out of 100,904
    • In genomics: 350 out of 6,255
  • Year to date:
    • Site-wide: 8,136 out of 100,904
  • Since beginning of last month:
    • Site-wide: 7,864 out of 100,904

Scaling computational genomics to millions of individuals with GPUs

genomics more details view paper
  • Downloaded 3,220 times
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    • Site-wide: 1,901 out of 100,904
    • In genomics: 368 out of 6,255
  • Year to date:
    • Site-wide: 30,691 out of 100,904
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    • Site-wide: 33,904 out of 100,904

A comprehensive analysis of RNA sequences reveals macroscopic somatic clonal expansion across normal tissues

genomics more details view paper
  • Downloaded 3,178 times
  • Download rankings, all-time:
    • Site-wide: 1,959 out of 100,904
    • In genomics: 378 out of 6,255
  • Year to date:
    • Site-wide: 11,394 out of 100,904
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    • Site-wide: 16,715 out of 100,904

A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations

cancer biology more details view paper
  • Downloaded 3,108 times
  • Download rankings, all-time:
    • Site-wide: 2,039 out of 100,904
    • In cancer biology: 50 out of 3,615
  • Year to date:
    • Site-wide: 12,692 out of 100,904
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    • Site-wide: 35,512 out of 100,904

Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer

cancer biology more details view paper
  • Downloaded 2,711 times
  • Download rankings, all-time:
    • Site-wide: 2,523 out of 100,904
    • In cancer biology: 58 out of 3,615
  • Year to date:
    • Site-wide: 598 out of 100,904
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    • Site-wide: 1,031 out of 100,904

WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers

cancer biology more details view paper
  • Downloaded 2,656 times
  • Download rankings, all-time:
    • Site-wide: 2,615 out of 100,904
    • In cancer biology: 61 out of 3,615
  • Year to date:
    • Site-wide: 5,296 out of 100,904
  • Since beginning of last month:
    • Site-wide: 15,404 out of 100,904

Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment

bioinformatics more details view paper
  • Downloaded 2,384 times
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    • Site-wide: 3,154 out of 100,904
    • In bioinformatics: 545 out of 9,264
  • Year to date:
    • Site-wide: 4,169 out of 100,904
  • Since beginning of last month:
    • Site-wide: 6,535 out of 100,904

Cell type specific genetic regulation of gene expression across human tissues

genomics more details view paper
  • Downloaded 2,258 times
  • Download rankings, all-time:
    • Site-wide: 3,464 out of 100,904
    • In genomics: 617 out of 6,255
  • Year to date:
    • Site-wide: 1,757 out of 100,904
  • Since beginning of last month:
    • Site-wide: 2,002 out of 100,904

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,227 times
  • Download rankings, all-time:
    • Site-wide: 3,542 out of 100,904
    • In genomics: 628 out of 6,255
  • Year to date:
    • Site-wide: 21,037 out of 100,904
  • Since beginning of last month:
    • Site-wide: 28,939 out of 100,904

A comparative analysis of network mutation burdens across 21 tumor types augments discovery from cancer genomes

cancer biology more details view paper
  • Downloaded 2,085 times
  • Download rankings, all-time:
    • Site-wide: 3,927 out of 100,904
    • In cancer biology: 80 out of 3,615
  • Year to date:
    • Site-wide: 86,727 out of 100,904
  • Since beginning of last month:
    • Site-wide: 80,304 out of 100,904

Passenger mutations in 2500 cancer genomes: Overall molecular functional impact and consequences

genomics more details view paper
  • Downloaded 2,002 times
  • Download rankings, all-time:
    • Site-wide: 4,195 out of 100,904
    • In genomics: 714 out of 6,255
  • Year to date:
    • Site-wide: 16,146 out of 100,904
  • Since beginning of last month:
    • Site-wide: 37,586 out of 100,904

Clustering of Type 2 Diabetes Genetic Loci by Multi-Trait Associations Identifies Disease Mechanisms and Subtypes

genetics more details view paper
  • Downloaded 1,928 times
  • Download rankings, all-time:
    • Site-wide: 4,478 out of 100,904
    • In genetics: 321 out of 5,022
  • Year to date:
    • Site-wide: 23,809 out of 100,904
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    • Site-wide: 24,681 out of 100,904

Passenger Hotspot Mutations in Cancer

genomics more details view paper
  • Downloaded 1,746 times
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    • Site-wide: 5,288 out of 100,904
    • In genomics: 851 out of 6,255
  • Year to date:
    • Site-wide: 25,296 out of 100,904
  • Since beginning of last month:
    • Site-wide: None out of 100,904

Pathway and network analysis of more than 2,500 whole cancer genomes

cancer biology more details view paper
  • Downloaded 1,519 times
  • Download rankings, all-time:
    • Site-wide: 6,684 out of 100,904
    • In cancer biology: 176 out of 3,615
  • Year to date:
    • Site-wide: 23,527 out of 100,904
  • Since beginning of last month:
    • Site-wide: 50,456 out of 100,904

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 1,048 times
  • Download rankings, all-time:
    • Site-wide: 12,431 out of 100,904
    • In genomics: 1,683 out of 6,255
  • Year to date:
    • Site-wide: 41,041 out of 100,904
  • Since beginning of last month:
    • Site-wide: 42,913 out of 100,904

Expanding discovery from cancer genomes by integrating protein network analyses with in vivo tumorigenesis assays

cancer biology more details view paper
  • Downloaded 910 times
  • Download rankings, all-time:
    • Site-wide: 15,629 out of 100,904
    • In cancer biology: 450 out of 3,615
  • Year to date:
    • Site-wide: 83,124 out of 100,904
  • Since beginning of last month:
    • Site-wide: 92,304 out of 100,904

The Tangent copy-number inference pipeline for cancer genome analyses

bioinformatics more details view paper
  • Downloaded 786 times
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    • Site-wide: 19,624 out of 100,904
    • In bioinformatics: 2,881 out of 9,264
  • Year to date:
    • Site-wide: 18,454 out of 100,904
  • Since beginning of last month:
    • Site-wide: 29,513 out of 100,904

Detecting cancer vulnerabilities through gene networks under purifying selection in 4,700 cancer genomes

bioinformatics more details view paper
  • Downloaded 699 times
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    • Site-wide: 23,304 out of 100,904
    • In bioinformatics: 3,263 out of 9,264
  • Year to date:
    • Site-wide: 63,106 out of 100,904
  • Since beginning of last month:
    • Site-wide: 77,555 out of 100,904

Case-control analysis identifies shared properties of rare germline variation in cancer predisposing genes

genetics more details view paper
  • Downloaded 660 times
  • Download rankings, all-time:
    • Site-wide: 25,339 out of 100,904
    • In genetics: 1,534 out of 5,022
  • Year to date:
    • Site-wide: 75,051 out of 100,904
  • Since beginning of last month:
    • Site-wide: 79,131 out of 100,904

Distinct evolutionary paths in chronic lymphocytic leukemia during resistance to graft-versus-leukemia

cancer biology more details view paper
  • Downloaded 336 times
  • Download rankings, all-time:
    • Site-wide: 55,672 out of 100,904
    • In cancer biology: 1,779 out of 3,615
  • Year to date:
    • Site-wide: 14,015 out of 100,904
  • Since beginning of last month:
    • Site-wide: 12,467 out of 100,904

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