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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,903 bioRxiv papers from 309,378 authors.

Author: Gad Getz

Rankings

  • All-time downloads: 108,850 (rank: 57 out of 309,222)
  • Categories:
    • bioinformatics: 10,121 (rank: 340 out of 26,886)
    • cancer biology: 41,563 (rank: 15 out of 20,164)
    • genetics: 6,418 (rank: 2,517 out of 30,603)
    • genomics: 50,748 (rank: 110 out of 34,888)

Downloads per author, site-wide

Preprints

Analysis of protein-coding genetic variation in 60,706 humans

genomics more details view paper
  • Downloaded 21,578 times
  • Download rankings, all-time:
    • Site-wide: 31 out of 70,860
    • In genomics: 7 out of 4,727
  • Year to date:
    • Site-wide: 13,430 out of 70,860
  • Since beginning of last month:
    • Site-wide: 18,462 out of 70,860

The Repertoire of Mutational Signatures in Human Cancer

cancer biology more details view paper
  • Downloaded 14,706 times
  • Download rankings, all-time:
    • Site-wide: 62 out of 70,860
    • In cancer biology: 2 out of 2,408
  • Year to date:
    • Site-wide: 185 out of 70,860
  • Since beginning of last month:
    • Site-wide: 70 out of 70,860

The evolutionary history of 2,658 cancers

cancer biology more details view paper
  • Downloaded 8,312 times
  • Download rankings, all-time:
    • Site-wide: 187 out of 70,860
    • In cancer biology: 6 out of 2,408
  • Year to date:
    • Site-wide: 1,272 out of 70,860
  • Since beginning of last month:
    • Site-wide: 588 out of 70,860

Rapid and efficient analysis of 20,000 RNA-seq samples with Toil

bioinformatics more details view paper
  • Downloaded 5,926 times
  • Download rankings, all-time:
    • Site-wide: 346 out of 70,860
    • In bioinformatics: 66 out of 6,936
  • Year to date:
    • Site-wide: 19,715 out of 70,860
  • Since beginning of last month:
    • Site-wide: 5,102 out of 70,860

The whole-genome panorama of cancer drivers

cancer biology more details view paper
  • Downloaded 5,455 times
  • Download rankings, all-time:
    • Site-wide: 399 out of 70,860
    • In cancer biology: 12 out of 2,408
  • Year to date:
    • Site-wide: 6,113 out of 70,860
  • Since beginning of last month:
    • Site-wide: 4,330 out of 70,860

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

genomics more details view paper
  • Downloaded 4,678 times
  • Download rankings, all-time:
    • Site-wide: 526 out of 70,860
    • In genomics: 134 out of 4,727
  • Year to date:
    • Site-wide: 2,937 out of 70,860
  • Since beginning of last month:
    • Site-wide: 2,371 out of 70,860

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 4,360 times
  • Download rankings, all-time:
    • Site-wide: 614 out of 70,860
    • In genomics: 156 out of 4,727
  • Year to date:
    • Site-wide: 7,158 out of 70,860
  • Since beginning of last month:
    • Site-wide: 8,423 out of 70,860

Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
  • Downloaded 4,217 times
  • Download rankings, all-time:
    • Site-wide: 653 out of 70,860
    • In genomics: 166 out of 4,727
  • Year to date:
    • Site-wide: 20,088 out of 70,860
  • Since beginning of last month:
    • Site-wide: 17,998 out of 70,860

The GTEx Consortium atlas of genetic regulatory effects across human tissues

genetics more details view paper
  • Downloaded 4,130 times
  • Download rankings, all-time:
    • Site-wide: 681 out of 70,860
    • In genetics: 64 out of 3,927
  • Year to date:
    • Site-wide: 206 out of 70,860
  • Since beginning of last month:
    • Site-wide: 256 out of 70,860

Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types

cancer biology more details view paper
  • Downloaded 4,051 times
  • Download rankings, all-time:
    • Site-wide: 712 out of 70,860
    • In cancer biology: 21 out of 2,408
  • Year to date:
    • Site-wide: 2,516 out of 70,860
  • Since beginning of last month:
    • Site-wide: 6,164 out of 70,860

Scaling computational genomics to millions of individuals with GPUs

genomics more details view paper
  • Downloaded 3,053 times
  • Download rankings, all-time:
    • Site-wide: 1,217 out of 70,860
    • In genomics: 281 out of 4,727
  • Year to date:
    • Site-wide: 7,734 out of 70,860
  • Since beginning of last month:
    • Site-wide: 6,132 out of 70,860

Tumor mutational landscape is a record of the pre-malignant state

genomics more details view paper
  • Downloaded 2,860 times
  • Download rankings, all-time:
    • Site-wide: 1,371 out of 70,860
    • In genomics: 309 out of 4,727
  • Year to date:
    • Site-wide: 15,073 out of 70,860
  • Since beginning of last month:
    • Site-wide: 7,019 out of 70,860

A comprehensive analysis of RNA sequences reveals macroscopic somatic clonal expansion across normal tissues

genomics more details view paper
  • Downloaded 2,811 times
  • Download rankings, all-time:
    • Site-wide: 1,412 out of 70,860
    • In genomics: 318 out of 4,727
  • Year to date:
    • Site-wide: 12,416 out of 70,860
  • Since beginning of last month:
    • Site-wide: 10,190 out of 70,860

A deep learning system can accurately classify primary and metastatic cancers based on patterns of passenger mutations

cancer biology more details view paper
  • Downloaded 2,795 times
  • Download rankings, all-time:
    • Site-wide: 1,427 out of 70,860
    • In cancer biology: 40 out of 2,408
  • Year to date:
    • Site-wide: 3,380 out of 70,860
  • Since beginning of last month:
    • Site-wide: 5,671 out of 70,860

WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers

cancer biology more details view paper
  • Downloaded 2,076 times
  • Download rankings, all-time:
    • Site-wide: 2,423 out of 70,860
    • In cancer biology: 59 out of 2,408
  • Year to date:
    • Site-wide: 3,178 out of 70,860
  • Since beginning of last month:
    • Site-wide: 3,191 out of 70,860

A comparative analysis of network mutation burdens across 21 tumor types augments discovery from cancer genomes

cancer biology more details view paper
  • Downloaded 2,023 times
  • Download rankings, all-time:
    • Site-wide: 2,532 out of 70,860
    • In cancer biology: 62 out of 2,408
  • Year to date:
    • Site-wide: 67,583 out of 70,860
  • Since beginning of last month:
    • Site-wide: 64,568 out of 70,860

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 1,987 times
  • Download rankings, all-time:
    • Site-wide: 2,611 out of 70,860
    • In genomics: 532 out of 4,727
  • Year to date:
    • Site-wide: 16,891 out of 70,860
  • Since beginning of last month:
    • Site-wide: 29,201 out of 70,860

Passenger mutations in 2500 cancer genomes: Overall molecular functional impact and consequences

genomics more details view paper
  • Downloaded 1,710 times
  • Download rankings, all-time:
    • Site-wide: 3,370 out of 70,860
    • In genomics: 643 out of 4,727
  • Year to date:
    • Site-wide: 19,253 out of 70,860
  • Since beginning of last month:
    • Site-wide: 5,989 out of 70,860

Clustering of Type 2 Diabetes Genetic Loci by Multi-Trait Associations Identifies Disease Mechanisms and Subtypes

genetics more details view paper
  • Downloaded 1,701 times
  • Download rankings, all-time:
    • Site-wide: 3,397 out of 70,860
    • In genetics: 286 out of 3,927
  • Year to date:
    • Site-wide: 53,520 out of 70,860
  • Since beginning of last month:
    • Site-wide: 22,138 out of 70,860

Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment

bioinformatics more details view paper
  • Downloaded 1,665 times
  • Download rankings, all-time:
    • Site-wide: 3,532 out of 70,860
    • In bioinformatics: 710 out of 6,936
  • Year to date:
    • Site-wide: 15,116 out of 70,860
  • Since beginning of last month:
    • Site-wide: 3,256 out of 70,860

Passenger Hotspot Mutations in Cancer

genomics more details view paper
  • Downloaded 1,560 times
  • Download rankings, all-time:
    • Site-wide: 3,958 out of 70,860
    • In genomics: 719 out of 4,727
  • Year to date:
    • Site-wide: 4,390 out of 70,860
  • Since beginning of last month:
    • Site-wide: 6,367 out of 70,860

Pathway and network analysis of more than 2,500 whole cancer genomes

cancer biology more details view paper
  • Downloaded 1,299 times
  • Download rankings, all-time:
    • Site-wide: 5,375 out of 70,860
    • In cancer biology: 138 out of 2,408
  • Year to date:
    • Site-wide: 16,901 out of 70,860
  • Since beginning of last month:
    • Site-wide: 15,155 out of 70,860

FireCloud, a scalable cloud-based platform for collaborative genome analysis: Strategies for reducing and controlling costs

bioinformatics more details view paper
  • Downloaded 1,037 times
  • Download rankings, all-time:
    • Site-wide: 7,818 out of 70,860
    • In bioinformatics: 1,382 out of 6,936
  • Year to date:
    • Site-wide: 17,103 out of 70,860
  • Since beginning of last month:
    • Site-wide: 16,123 out of 70,860

Cell type specific genetic regulation of gene expression across human tissues

genomics more details view paper
  • Downloaded 1,024 times
  • Download rankings, all-time:
    • Site-wide: 7,976 out of 70,860
    • In genomics: 1,259 out of 4,727
  • Year to date:
    • Site-wide: 1,796 out of 70,860
  • Since beginning of last month:
    • Site-wide: 3,287 out of 70,860

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 910 times
  • Download rankings, all-time:
    • Site-wide: 9,672 out of 70,860
    • In genomics: 1,445 out of 4,727
  • Year to date:
    • Site-wide: 18,099 out of 70,860
  • Since beginning of last month:
    • Site-wide: 64,418 out of 70,860

Expanding discovery from cancer genomes by integrating protein network analyses with in vivo tumorigenesis assays

cancer biology more details view paper
  • Downloaded 846 times
  • Download rankings, all-time:
    • Site-wide: 10,879 out of 70,860
    • In cancer biology: 322 out of 2,408
  • Year to date:
    • Site-wide: 46,856 out of 70,860
  • Since beginning of last month:
    • Site-wide: 35,782 out of 70,860

Detecting cancer vulnerabilities through gene networks under purifying selection in 4,700 cancer genomes

bioinformatics more details view paper
  • Downloaded 610 times
  • Download rankings, all-time:
    • Site-wide: 17,488 out of 70,860
    • In bioinformatics: 2,660 out of 6,936
  • Year to date:
    • Site-wide: 21,410 out of 70,860
  • Since beginning of last month:
    • Site-wide: 67,649 out of 70,860

Case-control analysis identifies shared properties of rare germline variation in cancer predisposing genes

genetics more details view paper
  • Downloaded 587 times
  • Download rankings, all-time:
    • Site-wide: 18,489 out of 70,860
    • In genetics: 1,227 out of 3,927
  • Year to date:
    • Site-wide: 37,526 out of 70,860
  • Since beginning of last month:
    • Site-wide: 42,644 out of 70,860

The Tangent copy-number inference pipeline for cancer genome analyses

bioinformatics more details view paper
  • Downloaded 534 times
  • Download rankings, all-time:
    • Site-wide: 20,982 out of 70,860
    • In bioinformatics: 3,049 out of 6,936
  • Year to date:
    • Site-wide: 7,392 out of 70,860
  • Since beginning of last month:
    • Site-wide: 19,783 out of 70,860

Calling Somatic SNVs and Indels with Mutect2

bioinformatics more details view paper
  • Downloaded 349 times
  • Download rankings, all-time:
    • Site-wide: 34,099 out of 70,860
    • In bioinformatics: 4,272 out of 6,936
  • Year to date:
    • Site-wide: 1,842 out of 70,860
  • Since beginning of last month:
    • Site-wide: 393 out of 70,860

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