Rxivist logo

Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,655 bioRxiv papers from 298,484 authors.

Author: Wolf Reik

Rankings

  • All-time downloads: 50,948 (rank: 287 out of 298,484)
  • Categories:
    • bioinformatics: 11,975 (rank: 238 out of 26,024)
    • cell biology: 11,789 (rank: 165 (tie) out of 20,277)
    • developmental biology: 13,834 (rank: 1 out of 11,272)
    • genomics: 11,350 (rank: 912 (tie) out of 34,054)
    • molecular biology: 2,000 (rank: 718 out of 14,336)

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,789 times
  • Download rankings, all-time:
    • Site-wide: 86 out of 67,655
    • In cell biology: 3 out of 3,292
  • Year to date:
    • Site-wide: 4,958 out of 67,655
  • Since beginning of last month:
    • Site-wide: 10,234 out of 67,655

Accurate prediction of single-cell DNA methylation states using deep learning

bioinformatics more details view paper
  • Downloaded 5,934 times
  • Download rankings, all-time:
    • Site-wide: 326 out of 67,655
    • In bioinformatics: 60 out of 6,659
  • Year to date:
    • Site-wide: 9,472 out of 67,655
  • Since beginning of last month:
    • Site-wide: 7,448 out of 67,655

Single cell multi-omics profiling reveals a hierarchical epigenetic landscape during mammalian germ layer specification

developmental biology more details view paper
  • Downloaded 5,258 times
  • Download rankings, all-time:
    • Site-wide: 404 out of 67,655
    • In developmental biology: 5 out of 2,012
  • Year to date:
    • Site-wide: 86 out of 67,655
  • Since beginning of last month:
    • Site-wide: 373 out of 67,655

SC3 - consensus clustering of single-cell RNA-Seq data

bioinformatics more details view paper
  • Downloaded 4,867 times
  • Download rankings, all-time:
    • Site-wide: 463 out of 67,655
    • In bioinformatics: 91 out of 6,659
  • Year to date:
    • Site-wide: 6,108 out of 67,655
  • Since beginning of last month:
    • Site-wide: 18,471 out of 67,655

scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

genomics more details view paper
  • Downloaded 4,544 times
  • Download rankings, all-time:
    • Site-wide: 532 out of 67,655
    • In genomics: 140 out of 4,583
  • Year to date:
    • Site-wide: 7,804 out of 67,655
  • Since beginning of last month:
    • Site-wide: 35,696 out of 67,655

Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

genomics more details view paper
  • Downloaded 2,594 times
  • Download rankings, all-time:
    • Site-wide: 1,536 out of 67,655
    • In genomics: 346 out of 4,583
  • Year to date:
    • Site-wide: 7,849 out of 67,655
  • Since beginning of last month:
    • Site-wide: 25,456 out of 67,655

Single-cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

developmental biology more details view paper
  • Downloaded 2,084 times
  • Download rankings, all-time:
    • Site-wide: 2,291 out of 67,655
    • In developmental biology: 32 out of 2,012
  • Year to date:
    • Site-wide: 2,548 out of 67,655
  • Since beginning of last month:
    • Site-wide: 6,345 out of 67,655

Tracking the embryonic stem cell transition from ground state pluripotency

developmental biology more details view paper
  • Downloaded 1,494 times
  • Download rankings, all-time:
    • Site-wide: 4,054 out of 67,655
    • In developmental biology: 68 out of 2,012
  • Year to date:
    • Site-wide: 37,626 out of 67,655
  • Since beginning of last month:
    • Site-wide: 30,325 out of 67,655

Establishment In Culture Of Expanded Potential Stem Cells

developmental biology more details view paper
  • Downloaded 1,468 times
  • Download rankings, all-time:
    • Site-wide: 4,161 out of 67,655
    • In developmental biology: 73 out of 2,012
  • Year to date:
    • Site-wide: 27,439 out of 67,655
  • Since beginning of last month:
    • Site-wide: 13,071 out of 67,655

A single-cell transcriptomics CRISPR-activation screen identifies new epigenetic regulators of zygotic genome activation

developmental biology more details view paper
  • Downloaded 1,381 times
  • Download rankings, all-time:
    • Site-wide: 4,606 out of 67,655
    • In developmental biology: 88 out of 2,012
  • Year to date:
    • Site-wide: 1,132 out of 67,655
  • Since beginning of last month:
    • Site-wide: 2,154 out of 67,655

Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity

bioinformatics more details view paper
  • Downloaded 1,174 times
  • Download rankings, all-time:
    • Site-wide: 6,025 out of 67,655
    • In bioinformatics: 1,131 out of 6,659
  • Year to date:
    • Site-wide: 12,141 out of 67,655
  • Since beginning of last month:
    • Site-wide: 27,730 out of 67,655

Epigenetic resetting of human pluripotency

developmental biology more details view paper
  • Downloaded 1,172 times
  • Download rankings, all-time:
    • Site-wide: 6,051 out of 67,655
    • In developmental biology: 118 out of 2,012
  • Year to date:
    • Site-wide: 31,900 out of 67,655
  • Since beginning of last month:
    • Site-wide: 47,784 out of 67,655

Screening for genes that accelerate the epigenetic ageing clock in humans reveals a role for the H3K36 methyltransferase NSD1

genomics more details view paper
  • Downloaded 1,138 times
  • Download rankings, all-time:
    • Site-wide: 6,326 out of 67,655
    • In genomics: 1,044 out of 4,583
  • Year to date:
    • Site-wide: 1,609 out of 67,655
  • Since beginning of last month:
    • Site-wide: 8,715 out of 67,655

A non-catalytic role of TET3 promotes open chromatin and enhances global transcription

developmental biology more details view paper
  • Downloaded 977 times
  • Download rankings, all-time:
    • Site-wide: 8,130 out of 67,655
    • In developmental biology: 174 out of 2,012
  • Year to date:
    • Site-wide: 14,541 out of 67,655
  • Since beginning of last month:
    • Site-wide: 10,191 out of 67,655

5-Formylcytosine controls nucleosome positioning through covalent histone-DNA interaction

genomics more details view paper
  • Downloaded 947 times
  • Download rankings, all-time:
    • Site-wide: 8,573 out of 67,655
    • In genomics: 1,329 out of 4,583
  • Year to date:
    • Site-wide: 36,592 out of 67,655
  • Since beginning of last month:
    • Site-wide: 63,949 out of 67,655

Genome-scale oscillations in DNA methylation during exit from pluripotency

genomics more details view paper
  • Downloaded 941 times
  • Download rankings, all-time:
    • Site-wide: 8,673 out of 67,655
    • In genomics: 1,336 out of 4,583
  • Year to date:
    • Site-wide: 33,346 out of 67,655
  • Since beginning of last month:
    • Site-wide: 62,642 out of 67,655

The non-canonical SMC protein SmcHD1 antagonises TAD formation on the inactive X chromosome

molecular biology more details view paper
  • Downloaded 875 times
  • Download rankings, all-time:
    • Site-wide: 9,676 out of 67,655
    • In molecular biology: 294 out of 2,165
  • Year to date:
    • Site-wide: 32,154 out of 67,655
  • Since beginning of last month:
    • Site-wide: 22,458 out of 67,655

Dppa2 and Dppa4 directly regulate the Dux driven zygotic transcriptional programme

molecular biology more details view paper
  • Downloaded 812 times
  • Download rankings, all-time:
    • Site-wide: 10,918 out of 67,655
    • In molecular biology: 317 out of 2,165
  • Year to date:
    • Site-wide: 14,123 out of 67,655
  • Since beginning of last month:
    • Site-wide: 43,110 out of 67,655

Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in muscle stem cells

genomics more details view paper
  • Downloaded 658 times
  • Download rankings, all-time:
    • Site-wide: 14,765 out of 67,655
    • In genomics: 1,918 out of 4,583
  • Year to date:
    • Site-wide: 6,195 out of 67,655
  • Since beginning of last month:
    • Site-wide: 29,138 out of 67,655

Multi-Tissue DNA Methylation Age Predictor In Mouse

genomics more details view paper
  • Downloaded 528 times
  • Download rankings, all-time:
    • Site-wide: 19,974 out of 67,655
    • In genomics: 2,340 out of 4,583
  • Year to date:
    • Site-wide: 56,516 out of 67,655
  • Since beginning of last month:
    • Site-wide: 39,892 out of 67,655

Dppa2/4 target chromatin bivalency enabling multi-lineage commitment

molecular biology more details view paper
  • Downloaded 313 times
  • Download rankings, all-time:
    • Site-wide: 35,334 out of 67,655
    • In molecular biology: 1,048 out of 2,165
  • Year to date:
    • Site-wide: 14,188 out of 67,655
  • Since beginning of last month:
    • Site-wide: 532 out of 67,655

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News