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Author: Can Alkan

Rankings

  • All-time downloads: 14,603 (rank: 5,642 out of 428,374)
  • Categories:
    • bioinformatics: 4,903 (rank: 2,083 out of 36,286)
    • genomics: 9,700 (rank: 1,647 out of 44,724)

Downloads per author, site-wide

Preprints

A robust benchmark for germline structural variant detection

genomics more details view paper
  • Downloaded 5,242 times
  • Download rankings, all-time:
    • Site-wide: 808 out of 101,416
    • In genomics: 157 out of 6,281
  • Year to date:
    • Site-wide: 818 out of 101,416
  • Since beginning of last month:
    • Site-wide: 3,431 out of 101,416

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,458 times
  • Download rankings, all-time:
    • Site-wide: 1,084 out of 101,416
    • In genomics: 216 out of 6,281
  • Year to date:
    • Site-wide: 14,819 out of 101,416
  • Since beginning of last month:
    • Site-wide: 11,539 out of 101,416

Discovery of large genomic inversions using pooled clone sequencing

bioinformatics more details view paper
  • Downloaded 1,379 times
  • Download rankings, all-time:
    • Site-wide: 7,888 out of 101,416
    • In bioinformatics: 1,339 out of 9,295
  • Year to date:
    • Site-wide: 86,718 out of 101,416
  • Since beginning of last month:
    • Site-wide: 98,269 out of 101,416

LEAP: A Generalization Of The Landau-Vishkin Algorithm With Custom Gap Penalties

bioinformatics more details view paper
  • Downloaded 1,051 times
  • Download rankings, all-time:
    • Site-wide: 12,420 out of 101,416
    • In bioinformatics: 1,950 out of 9,295
  • Year to date:
    • Site-wide: 41,710 out of 101,416
  • Since beginning of last month:
    • Site-wide: 32,529 out of 101,416

Discovery of tandem and interspersed segmental duplications using high throughput sequencing

bioinformatics more details view paper
  • Downloaded 721 times
  • Download rankings, all-time:
    • Site-wide: 22,284 out of 101,416
    • In bioinformatics: 3,146 out of 9,295
  • Year to date:
    • Site-wide: 54,684 out of 101,416
  • Since beginning of last month:
    • Site-wide: 63,186 out of 101,416

Characterization of segmental duplications and large inversions using Linked-Reads

bioinformatics more details view paper
  • Downloaded 708 times
  • Download rankings, all-time:
    • Site-wide: 22,929 out of 101,416
    • In bioinformatics: 3,218 out of 9,295
  • Year to date:
    • Site-wide: 49,154 out of 101,416
  • Since beginning of last month:
    • Site-wide: 61,477 out of 101,416

Hercules: a profile HMM-based hybrid error correction algorithm for long reads

bioinformatics more details view paper
  • Downloaded 674 times
  • Download rankings, all-time:
    • Site-wide: 24,672 out of 101,416
    • In bioinformatics: 3,394 out of 9,295
  • Year to date:
    • Site-wide: 91,327 out of 101,416
  • Since beginning of last month:
    • Site-wide: 96,988 out of 101,416

Polishing Copy Number Variant Calls on Exome Sequencing Data via Deep Learning

bioinformatics more details view paper
  • Downloaded 370 times
  • Download rankings, all-time:
    • Site-wide: 50,990 out of 101,416
    • In bioinformatics: 5,843 out of 9,295
  • Year to date:
    • Site-wide: 12,270 out of 101,416
  • Since beginning of last month:
    • Site-wide: 13,738 out of 101,416

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News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
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