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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,110 bioRxiv papers from 295,231 authors.

Author: Tuuli Lappalainen

Rankings

  • All-time downloads: 37,389 (rank: 433 out of 295,231)
  • Categories:
    • bioinformatics: 4,167 (rank: 1,579 (tie) out of 25,721)
    • genetics: 12,664 (rank: 732 out of 29,452)
    • genomics: 20,558 (rank: 330 out of 33,639)

Downloads per author, site-wide

Preprints

Tools and best practices for allelic expression analysis

genomics more details view paper
  • Downloaded 7,558 times
  • Download rankings, all-time:
    • Site-wide: 204 out of 67,110
    • In genomics: 59 out of 4,560
  • Year to date:
    • Site-wide: 8,811 out of 67,110
  • Since beginning of last month:
    • Site-wide: 21,100 out of 67,110

Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
  • Downloaded 4,189 times
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    • Site-wide: 622 out of 67,110
    • In genomics: 161 out of 4,560
  • Year to date:
    • Site-wide: 30,016 out of 67,110
  • Since beginning of last month:
    • Site-wide: 16,822 out of 67,110

Modified penetrance of coding variants by cis-regulatory variation shapes human traits

genetics more details view paper
  • Downloaded 3,763 times
  • Download rankings, all-time:
    • Site-wide: 770 out of 67,110
    • In genetics: 74 out of 3,775
  • Year to date:
    • Site-wide: 15,993 out of 67,110
  • Since beginning of last month:
    • Site-wide: 35,634 out of 67,110

The GTEx Consortium atlas of genetic regulatory effects across human tissues

genetics more details view paper
  • Downloaded 3,487 times
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    • Site-wide: 885 out of 67,110
    • In genetics: 83 out of 3,775
  • Year to date:
    • Site-wide: 181 out of 67,110
  • Since beginning of last month:
    • Site-wide: 186 out of 67,110

Distant regulatory effects of genetic variation in multiple human tissues

genomics more details view paper
  • Downloaded 2,517 times
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    • Site-wide: 1,602 out of 67,110
    • In genomics: 357 out of 4,560
  • Year to date:
    • Site-wide: 19,352 out of 67,110
  • Since beginning of last month:
    • Site-wide: 45,475 out of 67,110

Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change

bioinformatics more details view paper
  • Downloaded 2,037 times
  • Download rankings, all-time:
    • Site-wide: 2,356 out of 67,110
    • In bioinformatics: 478 out of 6,614
  • Year to date:
    • Site-wide: 29,295 out of 67,110
  • Since beginning of last month:
    • Site-wide: 13,567 out of 67,110

Landscape of X chromosome inactivation across human tissues

genomics more details view paper
  • Downloaded 1,858 times
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    • Site-wide: 2,737 out of 67,110
    • In genomics: 550 out of 4,560
  • Year to date:
    • Site-wide: 40,322 out of 67,110
  • Since beginning of last month:
    • Site-wide: 41,927 out of 67,110

Assessing allele specific expression across multiple tissues from RNA-seq read data

bioinformatics more details view paper
  • Downloaded 1,825 times
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    • Site-wide: 2,825 out of 67,110
    • In bioinformatics: 569 out of 6,614
  • Year to date:
    • Site-wide: 54,732 out of 67,110
  • Since beginning of last month:
    • Site-wide: 48,569 out of 67,110

Rare variant phasing and haplotypic expression from RNA-sequencing with phASER

genetics more details view paper
  • Downloaded 1,502 times
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    • Site-wide: 3,945 out of 67,110
    • In genetics: 340 out of 3,775
  • Year to date:
    • Site-wide: 42,468 out of 67,110
  • Since beginning of last month:
    • Site-wide: 54,581 out of 67,110

Long non-coding RNA gene regulation and trait associations across human tissues

genetics more details view paper
  • Downloaded 1,404 times
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    • Site-wide: 4,414 out of 67,110
    • In genetics: 374 out of 3,775
  • Year to date:
    • Site-wide: 1,041 out of 67,110
  • Since beginning of last month:
    • Site-wide: 2,075 out of 67,110

Quantifying genetic regulatory variation in human populations improves transcriptome analysis in rare disease patients

genomics more details view paper
  • Downloaded 1,102 times
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    • Site-wide: 6,597 out of 67,110
    • In genomics: 1,081 out of 4,560
  • Year to date:
    • Site-wide: 1,632 out of 67,110
  • Since beginning of last month:
    • Site-wide: 9,918 out of 67,110

Transcriptome Sequencing Reveals Widespread Gene-Gene and Gene-Environment Interactions

genomics more details view paper
  • Downloaded 1,091 times
  • Download rankings, all-time:
    • Site-wide: 6,716 out of 67,110
    • In genomics: 1,100 out of 4,560
  • Year to date:
    • Site-wide: 62,703 out of 67,110
  • Since beginning of last month:
    • Site-wide: 53,076 out of 67,110

Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations

genetics more details view paper
  • Downloaded 921 times
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    • Site-wide: 8,814 out of 67,110
    • In genetics: 659 out of 3,775
  • Year to date:
    • Site-wide: 52,090 out of 67,110
  • Since beginning of last month:
    • Site-wide: 64,843 out of 67,110

Widespread dose-dependent effects of RNA expression and splicing on complex diseases and traits

genetics more details view paper
  • Downloaded 858 times
  • Download rankings, all-time:
    • Site-wide: 9,839 out of 67,110
    • In genetics: 720 out of 3,775
  • Year to date:
    • Site-wide: 2,509 out of 67,110
  • Since beginning of last month:
    • Site-wide: 417 out of 67,110

Cell type specific genetic regulation of gene expression across human tissues

genomics more details view paper
  • Downloaded 857 times
  • Download rankings, all-time:
    • Site-wide: 9,855 out of 67,110
    • In genomics: 1,468 out of 4,560
  • Year to date:
    • Site-wide: 2,514 out of 67,110
  • Since beginning of last month:
    • Site-wide: 919 out of 67,110

Diverse transcriptomic signatures across human tissues identify functional rare genetic variation

genomics more details view paper
  • Downloaded 841 times
  • Download rankings, all-time:
    • Site-wide: 10,147 out of 67,110
    • In genomics: 1,502 out of 4,560
  • Year to date:
    • Site-wide: 2,594 out of 67,110
  • Since beginning of last month:
    • Site-wide: 1,309 out of 67,110

A vast resource of allelic expression data spanning human tissues

genomics more details view paper
  • Downloaded 545 times
  • Download rankings, all-time:
    • Site-wide: 18,849 out of 67,110
    • In genomics: 2,253 out of 4,560
  • Year to date:
    • Site-wide: 5,546 out of 67,110
  • Since beginning of last month:
    • Site-wide: 4,627 out of 67,110

A polyclonal allelic expression assay for detecting regulatory effects of transcript variants

genetics more details view paper
  • Downloaded 511 times
  • Download rankings, all-time:
    • Site-wide: 20,436 out of 67,110
    • In genetics: 1,375 out of 3,775
  • Year to date:
    • Site-wide: 6,137 out of 67,110
  • Since beginning of last month:
    • Site-wide: 6,850 out of 67,110

RecNW: A fast pairwise aligner for targeted sequencing

bioinformatics more details view paper
  • Downloaded 305 times
  • Download rankings, all-time:
    • Site-wide: 35,626 out of 67,110
    • In bioinformatics: 4,402 out of 6,614
  • Year to date:
    • Site-wide: 49,667 out of 67,110
  • Since beginning of last month:
    • Site-wide: 54,563 out of 67,110

Impact of admixture and ancestry on eQTL analysis and GWAS colocalization in GTEx

genetics more details view paper
  • Downloaded 218 times
  • Download rankings, all-time:
    • Site-wide: 45,736 out of 67,110
    • In genetics: 2,765 out of 3,775
  • Year to date:
    • Site-wide: 22,554 out of 67,110
  • Since beginning of last month:
    • Site-wide: 716 out of 67,110

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