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Author: Elizabeth F Purdom

Rankings

  • All-time downloads: 49,421 (rank: 2,417 out of 511,325)
  • Categories:
    • bioinformatics: 6,487 (rank: 1,392 (tie) out of 36,904)
    • genomics: 4,644 (rank: 4,495 out of 45,704)
    • neuroscience: 38,143 (rank: 55 (tie) out of 73,714)
    • plant biology: 147 (rank: 15,381 (tie) out of 17,415)

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Preprints

Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia

neuroscience more details view paper
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    • In neuroscience: 5 out of 18,627
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An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

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    • In neuroscience: 139 out of 18,627
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    • Site-wide: 1,254 out of 118,539

Performance Assessment and Selection of Normalization Procedures for Single-Cell RNA-seq

genomics more details view paper
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    • In genomics: 296 out of 6,442
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A multimodal cell census and atlas of the mammalian primary motor cortex

neuroscience more details view paper
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    • In neuroscience: 407 out of 18,627
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Slingshot: Cell lineage and pseudotime inference for single-cell transcriptomics

bioinformatics more details view paper
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    • In bioinformatics: 550 out of 9,592
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    • Site-wide: 22,718 out of 118,539

Improving replicability in single-cell RNA-Seq cell type discovery with Dune

bioinformatics more details view paper
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    • In bioinformatics: 2,211 out of 9,592
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    • Site-wide: 7,656 out of 118,539

Shrinkage of dispersion parameters in the binomial family, with application to differential exon skipping

bioinformatics more details view paper
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    • In bioinformatics: 2,371 out of 9,592
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    • Site-wide: 108,785 out of 118,539

clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets

bioinformatics more details view paper
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    • Site-wide: 90,196 out of 118,539

Clustering of mRNA-Seq data for detection of alternative splicing patterns

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    • In bioinformatics: 2,573 out of 9,592
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    • Site-wide: 96,957 out of 118,539
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    • Site-wide: 106,398 out of 118,539

MethCP: Differentially Methylated Region Detection with Change Point Models

genomics more details view paper
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    • In genomics: 2,287 out of 6,442
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    • Site-wide: 47,080 out of 118,539
  • Since beginning of last month:
    • Site-wide: 34,188 out of 118,539

mbkmeans: fast clustering for single cell data using mini-batch k-means

bioinformatics more details view paper
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    • Site-wide: 56,986 out of 118,539
    • In bioinformatics: 5,803 out of 9,592
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    • Site-wide: 14,323 out of 118,539

Drought shifts sorghum root metabolite and microbiome profiles and enriches the stress response factor pipecolic acid

plant biology more details view paper
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    • Site-wide: 101,321 out of 118,539
    • In plant biology: 2,820 out of 3,329
  • Year to date:
    • Site-wide: 59,482 out of 118,539
  • Since beginning of last month:
    • Site-wide: 7,295 out of 118,539

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