Author: Elizabeth F Purdom

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Preprints

Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia

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  • Site-wide: 185
  • In neuroscience: 5
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  • Site-wide: None
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An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

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  • Site-wide: 1,962
  • In neuroscience: 114
• Year to date:
  • Site-wide: 1,375
• Since beginning of last month:
  • Site-wide: 1,682

Performance Assessment and Selection of Normalization Procedures for Single-Cell RNA-seq

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  • Site-wide: 2,613
  • In genomics: 303
• Year to date:
  • Site-wide: 17,797
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A multimodal cell census and atlas of the mammalian primary motor cortex

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  • Site-wide: 3,439
  • In neuroscience: 279
• Year to date:
  • Site-wide: 1,454
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  • Site-wide: 1,777

Slingshot: Cell lineage and pseudotime inference for single-cell transcriptomics

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  • Site-wide: 5,096
  • In bioinformatics: 574
• Year to date:
  • Site-wide: 23,646
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Improving replicability in single-cell RNA-Seq cell type discovery with Dune

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  • Site-wide: 16,230
  • In bioinformatics: 1,990
• Year to date:
  • Site-wide: 12,384
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  • Site-wide: 9,451

Shrinkage of dispersion parameters in the binomial family, with application to differential exon skipping

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  • Site-wide: 20,625
  • In bioinformatics: 2,476
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clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets

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  • Site-wide: 22,477
  • In bioinformatics: 2,686
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Clustering of mRNA-Seq data for detection of alternative splicing patterns

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  • Site-wide: 23,316
  • In bioinformatics: 2,788
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MethCP: Differentially Methylated Region Detection with Change Point Models

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  • Site-wide: 23,537
  • In genomics: 2,300
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  • Site-wide: 35,473
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  • Site-wide: 33,211

mbkmeans: fast clustering for single cell data using mini-batch k-means

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  • Site-wide: 51,213
  • In bioinformatics: 5,303
• Year to date:
  • Site-wide: 19,426
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  • Site-wide: 35,068

Drought shifts sorghum root metabolite and microbiome profiles and enriches the stress response factor pipecolic acid

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  • Site-wide: 95,492
  • In plant biology: 2,584
• Year to date:
  • Site-wide: 26,281
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  • Site-wide: 33,976