Author: Bas E. Dutilh
- ORCiD: http://orcid.org/0000-0003-2329-7890
- Most recently observed institution: Theoretical Biology and Bioinformatics, Utrecht University
Rankings
- All-time downloads: 22,437 (rank: 6,490 )
- Categories:
- bioinformatics: 6,600 (rank: 1,434 (tie) )
- cell biology: 719 (rank: 11,004 (tie) )
- ecology: 1,876 (rank: 1,466 (tie) )
- evolutionary biology: 1,742 (rank: 2,871 (tie) )
- genetics: 888 (rank: 15,916 (tie) )
- genomics: 4,917 (rank: 4,382 )
- microbiology: 5,695 (rank: 2,004 )
Downloads per author, site-wide
Preprints
Computational Pan-Genomics: Status, Promises and Challenges
genomics more details view paper- Downloaded 4,549 times
- Download rankings, all-time:
- Site-wide: 1,978
- In genomics: 225
- Year to date:
- Site-wide: 22,788
- Since beginning of last month:
- Site-wide: 16,769
Ecogenomics and biogeochemical impacts of uncultivated globally abundant ocean viruses
ecology more details view paper- Downloaded 1,876 times
- Download rankings, all-time:
- Site-wide: 7,191
- In ecology: 86
- Year to date:
- Site-wide: 47,990
- Since beginning of last month:
- Site-wide: 35,192
Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
microbiology more details view paper- Downloaded 1,689 times
- Download rankings, all-time:
- Site-wide: 8,426
- In microbiology: 459
- Year to date:
- Site-wide: 56,720
- Since beginning of last month:
- Site-wide: 53,911
Bridging the divide: bacteria synthesizing archaeal membrane lipids
evolutionary biology more details view paper- Downloaded 1,594 times
- Download rankings, all-time:
- Site-wide: 9,217
- In evolutionary biology: 314
- Year to date:
- Site-wide: 16,994
- Since beginning of last month:
- Site-wide: 71,213
Contig annotation tool CAT robustly classifies assembled metagenomic contigs and long sequences
bioinformatics more details view paper- Downloaded 1,504 times
- Download rankings, all-time:
- Site-wide: 10,041
- In bioinformatics: 1,275
- Year to date:
- Site-wide: 41,720
- Since beginning of last month:
- Site-wide: 24,453
Bacterial Zombies And Ghosts: Production Of Inactivated Gram-Positive And Gram-Negative Species With Preserved Cellular Morphology And Cytoplasmic Content
microbiology more details view paper- Downloaded 1,460 times
- Download rankings, all-time:
- Site-wide: 10,467
- In microbiology: 583
- Year to date:
- Site-wide: 28,008
- Since beginning of last month:
- Site-wide: 16,232
Analysis of Spounaviruses as a Case Study for the Overdue Reclassification of Tailed Bacteriophages
microbiology more details view paper- Downloaded 1,311 times
- Download rankings, all-time:
- Site-wide: 12,340
- In microbiology: 685
- Year to date:
- Site-wide: 47,046
- Since beginning of last month:
- Site-wide: 52,760
Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT
bioinformatics more details view paper- Downloaded 1,110 times
- Download rankings, all-time:
- Site-wide: 15,858
- In bioinformatics: 1,981
- Year to date:
- Site-wide: 24,463
- Since beginning of last month:
- Site-wide: 30,593
FOCUS2: agile and sensitive classification of metagenomics data using a reduced database
bioinformatics more details view paper- Downloaded 942 times
- Download rankings, all-time:
- Site-wide: 20,204
- In bioinformatics: 2,495
- Year to date:
- Site-wide: 83,198
- Since beginning of last month:
- Site-wide: 80,623
Bottom-up ecology of the human microbiome: from metagenomes to metabolomes
bioinformatics more details view paper- Downloaded 939 times
- Download rankings, all-time:
- Site-wide: 20,301
- In bioinformatics: 2,507
- Year to date:
- Site-wide: 109,315
- Since beginning of last month:
- Site-wide: 77,210
Using the structure of genome data in the design of deep neural networks for predicting amyotrophic lateral sclerosis from genotype
genetics more details view paper- Downloaded 888 times
- Download rankings, all-time:
- Site-wide: 22,045
- In genetics: 1,110
- Year to date:
- Site-wide: 69,031
- Since beginning of last month:
- Site-wide: 96,650
Induction of differentiation and metabolic reprogramming in human hepatoma cells by adult human serum
cell biology more details view paper- Downloaded 719 times
- Download rankings, all-time:
- Site-wide: 29,632
- In cell biology: 1,147
- Year to date:
- Site-wide: 48,809
- Since beginning of last month:
- Site-wide: 33,780
Quantifying the impact of Human Leukocyte Antigen on the human gut microbiome
bioinformatics more details view paper- Downloaded 577 times
- Download rankings, all-time:
- Site-wide: 39,470
- In bioinformatics: 4,372
- Year to date:
- Site-wide: 23,496
- Since beginning of last month:
- Site-wide: 51,046
A symbiont phage protein aids in eukaryote immune evasion
microbiology more details view paper- Downloaded 559 times
- Download rankings, all-time:
- Site-wide: 41,124
- In microbiology: 2,537
- Year to date:
- Site-wide: 56,967
- Since beginning of last month:
- Site-wide: 102,309
Long identical sequences found in multiple bacterial genomes reveal frequent and widespread exchange of genetic material between distant species
bioinformatics more details view paper- Downloaded 552 times
- Download rankings, all-time:
- Site-wide: 41,731
- In bioinformatics: 4,544
- Year to date:
- Site-wide: 18,965
- Since beginning of last month:
- Site-wide: 39,531
Prophages are associated with extensive CRISPR-Cas auto-immunity
bioinformatics more details view paper- Downloaded 518 times
- Download rankings, all-time:
- Site-wide: 45,040
- In bioinformatics: 4,820
- Year to date:
- Site-wide: 55,693
- Since beginning of last month:
- Site-wide: 43,515
The gill-associated symbiont microbiome is a main source of woody-plant polysaccharide hydrolase genes and secondary metabolite gene clusters in Neoteredo reynei, a unique shipworm from south Atlantic mangroves.
microbiology more details view paper- Downloaded 489 times
- Download rankings, all-time:
- Site-wide: 48,280
- In microbiology: 3,082
- Year to date:
- Site-wide: 105,649
- Since beginning of last month:
- Site-wide: 81,175
OGRE: Overlap Graph-based metagenomic Read clustEring
bioinformatics more details view paper- Downloaded 458 times
- Download rankings, all-time:
- Site-wide: 51,918
- In bioinformatics: 5,421
- Year to date:
- Site-wide: 74,860
- Since beginning of last month:
- Site-wide: 93,654
Genome reconstruction of the non-culturable spinach downy mildew Peronospora effusa by metagenome filtering
genomics more details view paper- Downloaded 368 times
- Download rankings, all-time:
- Site-wide: 64,783
- In genomics: 4,636
- Year to date:
- Site-wide: 36,436
- Since beginning of last month:
- Site-wide: 66,659
Optimized DNA isolation method for microbiome analysis of human tissues
microbiology more details view paper- Downloaded 187 times
- Download rankings, all-time:
- Site-wide: 100,070
- In microbiology: 7,496
- Year to date:
- Site-wide: 13,143
- Since beginning of last month:
- Site-wide: 18,930
Nutrition or nature: disentangling the complex forces shaping prokaryote pan-genomes
evolutionary biology more details view paper- Downloaded 148 times
- Download rankings, all-time:
- Site-wide: 107,700
- In evolutionary biology: 5,752
- Year to date:
- Site-wide: 31,896
- Since beginning of last month:
- Site-wide: 3,644
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!