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Author: Stuart H. Orkin

Rankings

  • All-time downloads: 14,705 (rank: 4,145 out of 365,768)
  • Categories:
    • bioinformatics: 5,649 (rank: 1,412 out of 31,509)
    • developmental biology: 1,989 (rank: 732 (tie) out of 14,063)
    • genomics: 3,627 (rank: 5,167 (tie) out of 39,335)
    • molecular biology: 3,440 (rank: 516 (tie) out of 18,727)

Downloads per author, site-wide

Preprints

CUT&RUNTools: a flexible pipeline for CUT&RUN processing and footprint analysis

genomics more details view paper
  • Downloaded 2,641 times
  • Download rankings, all-time:
    • Site-wide: 2,137 out of 85,018
    • In genomics: 423 out of 5,477
  • Year to date:
    • Site-wide: 4,415 out of 85,018
  • Since beginning of last month:
    • Site-wide: 5,295 out of 85,018

Integrated design, execution, and analysis of arrayed and pooled CRISPR genome editing experiments

molecular biology more details view paper
  • Downloaded 2,623 times
  • Download rankings, all-time:
    • Site-wide: 2,168 out of 85,018
    • In molecular biology: 69 out of 2,856
  • Year to date:
    • Site-wide: 9,460 out of 85,018
  • Since beginning of last month:
    • Site-wide: 9,969 out of 85,018

CRISPResso: sequencing analysis toolbox for CRISPR genome editing

bioinformatics more details view paper
  • Downloaded 2,476 times
  • Download rankings, all-time:
    • Site-wide: 2,414 out of 85,018
    • In bioinformatics: 449 out of 8,141
  • Year to date:
    • Site-wide: 30,540 out of 85,018
  • Since beginning of last month:
    • Site-wide: 26,530 out of 85,018

An engineered CRISPR/Cas9 mouse line for simultaneous readout of lineage histories and gene expression profiles in single cells

developmental biology more details view paper
  • Downloaded 1,989 times
  • Download rankings, all-time:
    • Site-wide: 3,459 out of 85,018
    • In developmental biology: 55 out of 2,538
  • Year to date:
    • Site-wide: 1,266 out of 85,018
  • Since beginning of last month:
    • Site-wide: 473 out of 85,018

Dissecting super-enhancer hierarchy based on chromatin interactions

bioinformatics more details view paper
  • Downloaded 1,886 times
  • Download rankings, all-time:
    • Site-wide: 3,789 out of 85,018
    • In bioinformatics: 698 out of 8,141
  • Year to date:
    • Site-wide: 57,309 out of 85,018
  • Since beginning of last month:
    • Site-wide: 52,725 out of 85,018

CRISPR-SURF: Discovering regulatory elements by deconvolution of CRISPR tiling screen data

bioinformatics more details view paper
  • Downloaded 1,287 times
  • Download rankings, all-time:
    • Site-wide: 7,136 out of 85,018
    • In bioinformatics: 1,270 out of 8,141
  • Year to date:
    • Site-wide: 27,820 out of 85,018
  • Since beginning of last month:
    • Site-wide: 34,302 out of 85,018

Enhancer-dependence of gene expression increases with developmental age

molecular biology more details view paper
  • Downloaded 817 times
  • Download rankings, all-time:
    • Site-wide: 14,800 out of 85,018
    • In molecular biology: 476 out of 2,856
  • Year to date:
    • Site-wide: 17,908 out of 85,018
  • Since beginning of last month:
    • Site-wide: 26,319 out of 85,018

The Polycomb-dependent epigenome controls β-cell dysfunction, dedifferentiation and diabetes

genomics more details view paper
  • Downloaded 614 times
  • Download rankings, all-time:
    • Site-wide: 22,637 out of 85,018
    • In genomics: 2,542 out of 5,477
  • Year to date:
    • Site-wide: 52,036 out of 85,018
  • Since beginning of last month:
    • Site-wide: 56,596 out of 85,018

A saturating mutagenesis CRISPR-Cas9 mediated functional genomic screen identifies cis- and trans-regulatory elements of Oct4 in embryonic stem cells

genomics more details view paper
  • Downloaded 372 times
  • Download rankings, all-time:
    • Site-wide: 41,212 out of 85,018
    • In genomics: 3,744 out of 5,477
  • Year to date:
    • Site-wide: 21,693 out of 85,018
  • Since beginning of last month:
    • Site-wide: 23,211 out of 85,018

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