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Author: Hidewaki Nakagawa

  • Most recently observed institution: Laboratory for Genome Sequencing Analysis, RIKEN Center for Integrative Medical Sciences, Tokyo, Japan

Rankings

  • All-time downloads: 29,687 (rank: 4,399 )
  • Categories:
    • bioinformatics: 870 (rank: 14,950 (tie) )
    • cancer biology: 5,366 (rank: 427 )
    • genetics: 3,630 (rank: 4,567 )
    • genomics: 19,412 (rank: 526 )
    • oncology: 409 (rank: 1,115 (tie) )

Downloads per author, site-wide

Preprints

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 5,228 times
  • Download rankings, all-time:
    • Site-wide: 1,635
    • In genomics: 174
  • Year to date:
    • Site-wide: 21,964
  • Since beginning of last month:
    • Site-wide: 20,497

Mutational signatures associated with tobacco smoking in human cancer

cancer biology more details view paper
  • Downloaded 3,446 times
  • Download rankings, all-time:
    • Site-wide: 2,964
    • In cancer biology: 46
  • Year to date:
    • Site-wide: 111,206
  • Since beginning of last month:
    • Site-wide: 69,937

Immuno-genomic Pan-cancer Landscape Reveals Diverse Immune Escape Mechanisms and Immuno-Editing Histories

genomics more details view paper
  • Downloaded 2,809 times
  • Download rankings, all-time:
    • Site-wide: 3,960
    • In genomics: 473
  • Year to date:
    • Site-wide: 19,468
  • Since beginning of last month:
    • Site-wide: 17,907

Comprehensive Molecular Characterization of Mitochondrial Genomes in Human Cancers

genomics more details view paper
  • Downloaded 2,576 times
  • Download rankings, all-time:
    • Site-wide: 4,505
    • In genomics: 542
  • Year to date:
    • Site-wide: 20,825
  • Since beginning of last month:
    • Site-wide: 32,246

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,388 times
  • Download rankings, all-time:
    • Site-wide: 5,055
    • In genomics: 616
  • Year to date:
    • Site-wide: 116,185
  • Since beginning of last month:
    • Site-wide: 65,575

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,287 times
  • Download rankings, all-time:
    • Site-wide: 5,402
    • In genomics: 650
  • Year to date:
    • Site-wide: 10,031
  • Since beginning of last month:
    • Site-wide: 35,641

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,137 times
  • Download rankings, all-time:
    • Site-wide: 5,935
    • In genomics: 700
  • Year to date:
    • Site-wide: 85,891
  • Since beginning of last month:
    • Site-wide: 53,321

Large scale genome-wide association study in a Japanese population identified 45 novel susceptibility loci for 22 diseases

genetics more details view paper
  • Downloaded 2,076 times
  • Download rankings, all-time:
    • Site-wide: 6,196
    • In genetics: 312
  • Year to date:
    • Site-wide: 14,066
  • Since beginning of last month:
    • Site-wide: 8,598

Whole genome and RNA sequencing of 1,220 cancers reveals hundreds of genes deregulated by rearrangement of cis-regulatory elements

genomics more details view paper
  • Downloaded 1,534 times
  • Download rankings, all-time:
    • Site-wide: 9,775
    • In genomics: 1,106
  • Year to date:
    • Site-wide: 77,295
  • Since beginning of last month:
    • Site-wide: 91,988

Comprehensive Analysis of Indels in Whole-genome Microsatellite Regions and Microsatellite Instability across 21 Cancer Types

cancer biology more details view paper
  • Downloaded 1,214 times
  • Download rankings, all-time:
    • Site-wide: 13,856
    • In cancer biology: 299
  • Year to date:
    • Site-wide: 50,602
  • Since beginning of last month:
    • Site-wide: 29,600

Quantifying Immune-Based Counterselection of Somatic Mutations

genetics more details view paper
  • Downloaded 707 times
  • Download rankings, all-time:
    • Site-wide: 30,294
    • In genetics: 1,534
  • Year to date:
    • Site-wide: 69,143
  • Since beginning of last month:
    • Site-wide: 114,751

In-depth characterization of the cisplatin mutational signature in human cell lines and in esophageal and liver tumors

cancer biology more details view paper
  • Downloaded 706 times
  • Download rankings, all-time:
    • Site-wide: 30,359
    • In cancer biology: 817
  • Year to date:
    • Site-wide: 76,886
  • Since beginning of last month:
    • Site-wide: 57,846

Endogenization and excision of human herpesvirus 6 in human genomes

genetics more details view paper
  • Downloaded 634 times
  • Download rankings, all-time:
    • Site-wide: 35,041
    • In genetics: 1,752
  • Year to date:
    • Site-wide: 51,559
  • Since beginning of last month:
    • Site-wide: 73,577

ALPHLARD: a Bayesian method for analyzing HLA genes from whole genome sequence data

bioinformatics more details view paper
  • Downloaded 549 times
  • Download rankings, all-time:
    • Site-wide: 42,075
    • In bioinformatics: 4,568
  • Year to date:
    • Site-wide: 99,333
  • Since beginning of last month:
    • Site-wide: 109,622

Somatic mutation landscape reveals differential variability of cell-of-origin for primary liver cancer

genomics more details view paper
  • Downloaded 453 times
  • Download rankings, all-time:
    • Site-wide: 52,559
    • In genomics: 4,073
  • Year to date:
    • Site-wide: 102,844
  • Since beginning of last month:
    • Site-wide: 112,399

A multifunctional R package for identification of tumor-specific neoantigens

bioinformatics more details view paper
  • Downloaded 321 times
  • Download rankings, all-time:
    • Site-wide: 72,811
    • In bioinformatics: 6,888
  • Year to date:
    • Site-wide: 83,109
  • Since beginning of last month:
    • Site-wide: 95,074

Frequent post-treatment monitoring of colorectal cancer using individualized ctDNA validated by multi-regional molecular profiling

oncology more details view paper
  • Downloaded 232 times
  • Download rankings, all-time:
    • Site-wide: 90,482
    • In oncology: 148
  • Year to date:
    • Site-wide: 48,494
  • Since beginning of last month:
    • Site-wide: 55,088

Population-wide Screening for Germline Variants of Hereditary Cancer Genes in 12K Unselected Japanese Colorectal Cancers and 27K Controls

genetics more details view paper
  • Downloaded 213 times
  • Download rankings, all-time:
    • Site-wide: 94,603
    • In genetics: 4,355
  • Year to date:
    • Site-wide: 14,745
  • Since beginning of last month:
    • Site-wide: 40,657

Circulating-tumor DNA from Two Types of Blood Collection Tubes for Monitoring Tumor Burden Validated with Esophageal Squamous Cell Carcinoma Patients

oncology more details view paper
  • Downloaded 177 times
  • Download rankings, all-time:
    • Site-wide: 102,194
    • In oncology: 212
  • Year to date:
    • Site-wide: 39,283
  • Since beginning of last month:
    • Site-wide: 41,036

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