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Author: Hidewaki Nakagawa

  • Most recently observed institution: Laboratory for Genome Sequencing Analysis, RIKEN Center for Integrative Medical Sciences, Tokyo, Japan

Rankings

  • All-time downloads: 30,646 (rank: 4,952 )
  • Categories:
    • bioinformatics: 897 (rank: 15,769 (tie) )
    • cancer biology: 5,486 (rank: 477 )
    • genetics: 3,925 (rank: 4,464 (tie) )
    • genomics: 19,803 (rank: 532 )
    • oncology: 535 (rank: 1,013 (tie) )

Downloads per author, site-wide

Preprints

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 5,336 times
  • Download rankings, all-time:
    • Site-wide: 1,823
    • In genomics: 177
  • Year to date:
    • Site-wide: 20,482
  • Since beginning of last month:
    • Site-wide: 25,887

Mutational signatures associated with tobacco smoking in human cancer

cancer biology more details view paper
  • Downloaded 3,510 times
  • Download rankings, all-time:
    • Site-wide: 3,307
    • In cancer biology: 49
  • Year to date:
    • Site-wide: 40,735
  • Since beginning of last month:
    • Site-wide: 23,107

Immuno-genomic Pan-cancer Landscape Reveals Diverse Immune Escape Mechanisms and Immuno-Editing Histories

genomics more details view paper
  • Downloaded 2,910 times
  • Download rankings, all-time:
    • Site-wide: 4,314
    • In genomics: 483
  • Year to date:
    • Site-wide: 21,749
  • Since beginning of last month:
    • Site-wide: 20,784

Comprehensive Molecular Characterization of Mitochondrial Genomes in Human Cancers

genomics more details view paper
  • Downloaded 2,630 times
  • Download rankings, all-time:
    • Site-wide: 4,981
    • In genomics: 560
  • Year to date:
    • Site-wide: 38,039
  • Since beginning of last month:
    • Site-wide: 38,526

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,409 times
  • Download rankings, all-time:
    • Site-wide: 5,682
    • In genomics: 647
  • Year to date:
    • Site-wide: 95,456
  • Since beginning of last month:
    • Site-wide: 89,254

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,338 times
  • Download rankings, all-time:
    • Site-wide: 5,946
    • In genomics: 670
  • Year to date:
    • Site-wide: 34,408
  • Since beginning of last month:
    • Site-wide: 41,537

Large scale genome-wide association study in a Japanese population identified 45 novel susceptibility loci for 22 diseases

genetics more details view paper
  • Downloaded 2,322 times
  • Download rankings, all-time:
    • Site-wide: 6,017
    • In genetics: 282
  • Year to date:
    • Site-wide: 7,419
  • Since beginning of last month:
    • Site-wide: 7,122

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,163 times
  • Download rankings, all-time:
    • Site-wide: 6,653
    • In genomics: 741
  • Year to date:
    • Site-wide: 80,756
  • Since beginning of last month:
    • Site-wide: 57,024

Whole genome and RNA sequencing of 1,220 cancers reveals hundreds of genes deregulated by rearrangement of cis-regulatory elements

genomics more details view paper
  • Downloaded 1,556 times
  • Download rankings, all-time:
    • Site-wide: 10,865
    • In genomics: 1,182
  • Year to date:
    • Site-wide: 86,195
  • Since beginning of last month:
    • Site-wide: 73,261

Comprehensive Analysis of Indels in Whole-genome Microsatellite Regions and Microsatellite Instability across 21 Cancer Types

cancer biology more details view paper
  • Downloaded 1,250 times
  • Download rankings, all-time:
    • Site-wide: 15,106
    • In cancer biology: 326
  • Year to date:
    • Site-wide: 58,057
  • Since beginning of last month:
    • Site-wide: 90,725

In-depth characterization of the cisplatin mutational signature in human cell lines and in esophageal and liver tumors

cancer biology more details view paper
  • Downloaded 726 times
  • Download rankings, all-time:
    • Site-wide: 33,053
    • In cancer biology: 890
  • Year to date:
    • Site-wide: 90,923
  • Since beginning of last month:
    • Site-wide: 85,972

Quantifying Immune-Based Counterselection of Somatic Mutations

genetics more details view paper
  • Downloaded 722 times
  • Download rankings, all-time:
    • Site-wide: 33,258
    • In genetics: 1,612
  • Year to date:
    • Site-wide: 101,980
  • Since beginning of last month:
    • Site-wide: 89,267

Endogenization and excision of human herpesvirus 6 in human genomes

genetics more details view paper
  • Downloaded 648 times
  • Download rankings, all-time:
    • Site-wide: 38,468
    • In genetics: 1,826
  • Year to date:
    • Site-wide: 99,113
  • Since beginning of last month:
    • Site-wide: 84,175

ALPHLARD: a Bayesian method for analyzing HLA genes from whole genome sequence data

bioinformatics more details view paper
  • Downloaded 566 times
  • Download rankings, all-time:
    • Site-wide: 45,596
    • In bioinformatics: 4,814
  • Year to date:
    • Site-wide: 103,182
  • Since beginning of last month:
    • Site-wide: 80,590

Somatic mutation landscape reveals differential variability of cell-of-origin for primary liver cancer

genomics more details view paper
  • Downloaded 461 times
  • Download rankings, all-time:
    • Site-wide: 57,847
    • In genomics: 4,317
  • Year to date:
    • Site-wide: 127,927
  • Since beginning of last month:
    • Site-wide: 130,971

A multifunctional R package for identification of tumor-specific neoantigens

bioinformatics more details view paper
  • Downloaded 331 times
  • Download rankings, all-time:
    • Site-wide: 78,872
    • In bioinformatics: 7,250
  • Year to date:
    • Site-wide: 117,309
  • Since beginning of last month:
    • Site-wide: 93,328

Circulating-tumor DNA from Two Types of Blood Collection Tubes for Monitoring Tumor Burden Validated with Esophageal Squamous Cell Carcinoma Patients

oncology more details view paper
  • Downloaded 278 times
  • Download rankings, all-time:
    • Site-wide: 90,020
    • In oncology: 157
  • Year to date:
    • Site-wide: 23,424
  • Since beginning of last month:
    • Site-wide: 22,737

Frequent post-treatment monitoring of colorectal cancer using individualized ctDNA validated by multi-regional molecular profiling

oncology more details view paper
  • Downloaded 257 times
  • Download rankings, all-time:
    • Site-wide: 94,485
    • In oncology: 169
  • Year to date:
    • Site-wide: 73,430
  • Since beginning of last month:
    • Site-wide: 67,953

Population-wide Screening for Germline Variants of Hereditary Cancer Genes in 12K Unselected Japanese Colorectal Cancers and 27K Controls

genetics more details view paper
  • Downloaded 233 times
  • Download rankings, all-time:
    • Site-wide: 99,784
    • In genetics: 4,450
  • Year to date:
    • Site-wide: 61,932
  • Since beginning of last month:
    • Site-wide: 84,037

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