Author: Darren Heavens

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Preprints

Rapid profiling of the preterm infant gut microbiota using nanopore sequencing aids pathogen diagnostics

• Downloaded 5,293 times
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  • Site-wide: 1,578
  • In genomics: 166
• Year to date:
  • Site-wide: None
• Since beginning of last month:
  • Site-wide: 48,029

A critical comparison of technologies for a plant genome sequencing project

• Downloaded 3,855 times
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  • Site-wide: 2,463
  • In genomics: 297
• Year to date:
  • Site-wide: 4,853
• Since beginning of last month:
  • Site-wide: 8,117

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations.

• Downloaded 2,763 times
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  • Site-wide: 3,973
  • In genomics: 477
• Year to date:
  • Site-wide: None
• Since beginning of last month:
  • Site-wide: 70,171

W2RAP: a pipeline for high quality, robust assemblies of large complex genomes from short read data

• Downloaded 1,683 times
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  • Site-wide: 8,303
  • In bioinformatics: 1,053
• Year to date:
  • Site-wide: None
• Since beginning of last month:
  • Site-wide: 35,361

Stability of association between Arabidopsis thaliana and Pseudomonas pathogens over evolutionary time scales

• Downloaded 1,287 times
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  • Site-wide: 12,448
  • In microbiology: 676
• Year to date:
  • Site-wide: 27,769
• Since beginning of last month:
  • Site-wide: 41,256

Semi-quantitative characterisation of mixed pollen samples using MinION sequencing and Reverse Metagenomics (RevMet)

• Downloaded 1,207 times
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  • Site-wide: 13,692
  • In ecology: 233
• Year to date:
  • Site-wide: None
• Since beginning of last month:
  • Site-wide: 74,339

Genomic and phylogenetic analysis of Salmonella Typhimurium and its monophasic variants responsible for invasive endemic infections in Colombia

• Downloaded 866 times
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  • Site-wide: 22,384
  • In genomics: 2,238
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  • Site-wide: None
• Since beginning of last month:
  • Site-wide: 78,478

An ultra high-density Arabidopsis thaliana crossover map that refines the influences of structural variation and epigenetic features

• Downloaded 855 times
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  • Site-wide: 22,781
  • In genetics: 1,157
• Year to date:
  • Site-wide: 33,774
• Since beginning of last month:
  • Site-wide: 40,315

Sequencing smart: De novo sequencing and assembly approaches for non-model mammals.

• Downloaded 702 times
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  • Site-wide: 30,066
  • In genomics: 2,757
• Year to date:
  • Site-wide: 37,778
• Since beginning of last month:
  • Site-wide: 74,354

A draft genome of grass pea (Lathyrus sativus), a resilient diploid legume

• Downloaded 511 times
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  • Site-wide: 45,025
  • In genomics: 3,681
• Year to date:
  • Site-wide: 13,444
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  • Site-wide: 17,973

A novel allele of ASY3 promotes meiotic stability in autotetraploid Arabidopsis lyrata

• Downloaded 422 times
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  • Site-wide: 55,527
  • In evolutionary biology: 3,187
• Year to date:
  • Site-wide: 33,352
• Since beginning of last month:
  • Site-wide: 29,400

Spatially resolved transcriptomics reveals plant host responses to pathogens

• Downloaded 416 times
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  • Site-wide: 56,424
  • In genomics: 4,272
• Year to date:
  • Site-wide: 27,384
• Since beginning of last month:
  • Site-wide: 57,524

A genome assembly of the barley 'transformation reference' cultivar Golden Promise

• Downloaded 409 times
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  • Site-wide: 57,426
  • In genomics: 4,324
• Year to date:
  • Site-wide: 19,697
• Since beginning of last month:
  • Site-wide: 60,512

Independent assessment and improvement of wheat genome assemblies using Fosill jumping libraries

• Downloaded 387 times
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  • Site-wide: 60,570
  • In genomics: 4,476
• Year to date:
  • Site-wide: None
• Since beginning of last month:
  • Site-wide: 60,320

An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes

• Downloaded 342 times
• Download rankings, all-time:
  • Site-wide: 67,933
  • In microbiology: 4,579
• Year to date:
  • Site-wide: 9,967
• Since beginning of last month:
  • Site-wide: 15,905

A low-cost pipeline for soil microbiome profiling

• Downloaded 305 times
• Download rankings, all-time:
  • Site-wide: 74,405
  • In genomics: 5,047
• Year to date:
  • Site-wide: 24,113
• Since beginning of last month:
  • Site-wide: 39,608