Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,240 bioRxiv papers from 267,843 authors.

Downloads per author, site-wide

Preprints

Highly-accurate long-read sequencing improves variant detection and assembly of a human genome

• Downloaded 9,284 times
• Download rankings, all-time:
  • Site-wide: 118 out of 60,323
  • In genomics: 39 out of 4,185
• Year to date:
  • Site-wide: 16 out of 60,323
• Since beginning of last month:
  • Site-wide: 82 out of 60,323

Multi-platform discovery of haplotype-resolved structural variation in human genomes

• Downloaded 7,872 times
• Download rankings, all-time:
  • Site-wide: 166 out of 60,323
  • In genomics: 50 out of 4,185
• Year to date:
  • Site-wide: 512 out of 60,323
• Since beginning of last month:
  • Site-wide: 5,239 out of 60,323

WhatsHap: fast and accurate read-based phasing

• Downloaded 4,625 times
• Download rankings, all-time:
  • Site-wide: 445 out of 60,323
  • In bioinformatics: 89 out of 6,082
• Year to date:
  • Site-wide: 546 out of 60,323
• Since beginning of last month:
  • Site-wide: 992 out of 60,323

Computational Pan-Genomics: Status, Promises and Challenges

• Downloaded 4,044 times
• Download rankings, all-time:
  • Site-wide: 592 out of 60,323
  • In genomics: 158 out of 4,185
• Year to date:
  • Site-wide: 9,356 out of 60,323
• Since beginning of last month:
  • Site-wide: 9,475 out of 60,323

Efficient de novo assembly of eleven human genomes using PromethION sequencing and a novel nanopore toolkit

• Downloaded 3,245 times
• Download rankings, all-time:
  • Site-wide: 898 out of 60,323
  • In bioinformatics: 179 out of 6,082
• Year to date:
  • Site-wide: 133 out of 60,323
• Since beginning of last month:
  • Site-wide: 16 out of 60,323

Haplotype-aware genotyping from noisy long reads

• Downloaded 2,350 times
• Download rankings, all-time:
  • Site-wide: 1,622 out of 60,323
  • In bioinformatics: 322 out of 6,082
• Year to date:
  • Site-wide: 1,779 out of 60,323
• Since beginning of last month:
  • Site-wide: 5,853 out of 60,323

Mapping And Phasing Of Structural Variation In Patient Genomes Using Nanopore Sequencing

• Downloaded 2,309 times
• Download rankings, all-time:
  • Site-wide: 1,671 out of 60,323
  • In genomics: 374 out of 4,185
• Year to date:
  • Site-wide: 34,454 out of 60,323
• Since beginning of last month:
  • Site-wide: 33,549 out of 60,323

A robust benchmark for germline structural variant detection

• Downloaded 2,103 times
• Download rankings, all-time:
  • Site-wide: 1,958 out of 60,323
  • In genomics: 433 out of 4,185
• Year to date:
  • Site-wide: 307 out of 60,323
• Since beginning of last month:
  • Site-wide: 287 out of 60,323

A high-quality reference panel reveals the complexity and distribution of structural genome changes in a human population

• Downloaded 1,114 times
• Download rankings, all-time:
  • Site-wide: 5,737 out of 60,323
  • In genetics: 466 out of 3,443
• Year to date:
  • Site-wide: 38,910 out of 60,323
• Since beginning of last month:
  • Site-wide: 36,368 out of 60,323

Detecting Horizontal Gene Transfer by Mapping Sequencing Reads Across Species Boundaries

• Downloaded 1,014 times
• Download rankings, all-time:
  • Site-wide: 6,699 out of 60,323
  • In bioinformatics: 1,224 out of 6,082
• Year to date:
  • Site-wide: 53,082 out of 60,323
• Since beginning of last month:
  • Site-wide: 46,410 out of 60,323

Dense And Accurate Whole-Chromosome Haplotyping Of Individual Genomes

• Downloaded 848 times
• Download rankings, all-time:
  • Site-wide: 8,867 out of 60,323
  • In bioinformatics: 1,555 out of 6,082
• Year to date:
  • Site-wide: 50,500 out of 60,323
• Since beginning of last month:
  • Site-wide: 46,351 out of 60,323

Bit-parallel sequence-to-graph alignment

• Downloaded 818 times
• Download rankings, all-time:
  • Site-wide: 9,376 out of 60,323
  • In bioinformatics: 1,645 out of 6,082
• Year to date:
  • Site-wide: 11,007 out of 60,323
• Since beginning of last month:
  • Site-wide: 16,604 out of 60,323

Aligning sequences to general graphs in O(V + mE) time

• Downloaded 776 times
• Download rankings, all-time:
  • Site-wide: 10,144 out of 60,323
  • In bioinformatics: 1,757 out of 6,082
• Year to date:
  • Site-wide: 24,605 out of 60,323
• Since beginning of last month:
  • Site-wide: 36,931 out of 60,323

Read-Based Phasing of Related Individuals

• Downloaded 759 times
• Download rankings, all-time:
  • Site-wide: 10,470 out of 60,323
  • In bioinformatics: 1,803 out of 6,082
• Year to date:
  • Site-wide: 53,002 out of 60,323
• Since beginning of last month:
  • Site-wide: 52,087 out of 60,323

Genotyping of Inversions and Tandem Duplications

• Downloaded 478 times
• Download rankings, all-time:
  • Site-wide: 19,497 out of 60,323
  • In bioinformatics: 2,893 out of 6,082
• Year to date:
  • Site-wide: 56,717 out of 60,323
• Since beginning of last month:
  • Site-wide: 57,550 out of 60,323

Selecting Reads for Haplotype Assembly

• Downloaded 388 times
• Download rankings, all-time:
  • Site-wide: 24,711 out of 60,323
  • In bioinformatics: 3,429 out of 6,082
• Year to date:
  • Site-wide: 52,463 out of 60,323
• Since beginning of last month:
  • Site-wide: 57,026 out of 60,323

Enhancing Sensitivity And Controlling False Discovery Rate In Somatic Indel Discovery Using A Latent Variable Model

• Downloaded 376 times
• Download rankings, all-time:
  • Site-wide: 25,494 out of 60,323
  • In bioinformatics: 3,508 out of 6,082
• Year to date:
  • Site-wide: 49,941 out of 60,323
• Since beginning of last month:
  • Site-wide: 25,205 out of 60,323

Enhancing sensitivity and controlling false discovery rate in somatic indel discovery

• Downloaded 319 times
• Download rankings, all-time:
  • Site-wide: 29,974 out of 60,323
  • In bioinformatics: 3,910 out of 6,082
• Year to date:
  • Site-wide: 9,127 out of 60,323
• Since beginning of last month:
  • Site-wide: 562 out of 60,323

Fully-sensitive Seed Finding in Sequence Graphs Using a Hybrid Index

• Downloaded 227 times
• Download rankings, all-time:
  • Site-wide: 39,101 out of 60,323
  • In bioinformatics: 4,675 out of 6,082
• Year to date:
  • Site-wide: 15,103 out of 60,323
• Since beginning of last month:
  • Site-wide: 17,219 out of 60,323