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Author: Alex K. Shalek

  • ORCiD: http://orcid.org/0000-0001-5670-8778
  • Most recently observed institution: The Ragon Institute; Massachusetts Institute of Technology; The Broad Institute; Harvard-MIT Program in Health Sciences and Technology

Rankings

  • All-time downloads: 31,068 (rank: 1,221 out of 360,790)
  • Categories:
    • bioengineering: 1,800 (rank: 761 out of 10,028)
    • cancer biology: 260 (rank: 16,986 (tie) out of 24,471)
    • genomics: 15,716 (rank: 564 out of 39,055)
    • immunology: 11,272 (rank: 90 (tie) out of 18,540)
    • microbiology: 1,260 (rank: 5,422 (tie) out of 39,575)
    • systems biology: 760 (rank: 3,829 (tie) out of 10,774)

Downloads per author, site-wide

Preprints

Systematic comparative analysis of single cell RNA-sequencing methods

genomics more details view paper
  • Downloaded 10,923 times
  • Download rankings, all-time:
    • Site-wide: 184 out of 83,779
    • In genomics: 39 out of 5,409
  • Year to date:
    • Site-wide: 288 out of 83,779
  • Since beginning of last month:
    • Site-wide: 459 out of 83,779

Rewiring of the cellular and inter-cellular landscape of the human colon during ulcerative colitis

genomics more details view paper
  • Downloaded 4,232 times
  • Download rankings, all-time:
    • Site-wide: 913 out of 83,779
    • In genomics: 200 out of 5,409
  • Year to date:
    • Site-wide: None out of 83,779
  • Since beginning of last month:
    • Site-wide: None out of 83,779

Highly Efficient, Massively-Parallel Single-Cell RNA-Seq Reveals Cellular States and Molecular Features of Human Skin Pathology

immunology more details view paper
  • Downloaded 3,376 times
  • Download rankings, all-time:
    • Site-wide: 1,366 out of 83,779
    • In immunology: 29 out of 2,339
  • Year to date:
    • Site-wide: 649 out of 83,779
  • Since beginning of last month:
    • Site-wide: 939 out of 83,779

Sensory Neurons Innervate Peripheral Lymph Nodes and Locally Regulate Gene Expression in Postsynaptic Endothelium, Stromal Cells, and Innate Leukocytes

immunology more details view paper
  • Downloaded 3,052 times
  • Download rankings, all-time:
    • Site-wide: 1,624 out of 83,779
    • In immunology: 34 out of 2,339
  • Year to date:
    • Site-wide: 662 out of 83,779
  • Since beginning of last month:
    • Site-wide: 1,359 out of 83,779

T helper cells modulate intestinal stem cell renewal and differentiation

immunology more details view paper
  • Downloaded 2,110 times
  • Download rankings, all-time:
    • Site-wide: 3,089 out of 83,779
    • In immunology: 67 out of 2,339
  • Year to date:
    • Site-wide: 27,818 out of 83,779
  • Since beginning of last month:
    • Site-wide: 26,289 out of 83,779

Reduced cellular diversity and an altered basal progenitor cell state inform epithelial barrier dysfunction in human type 2 immunity

immunology more details view paper
  • Downloaded 1,295 times
  • Download rankings, all-time:
    • Site-wide: 6,953 out of 83,779
    • In immunology: 147 out of 2,339
  • Year to date:
    • Site-wide: 21,373 out of 83,779
  • Since beginning of last month:
    • Site-wide: 14,966 out of 83,779

Identification of a master regulator of differentiation in Toxoplasma

microbiology more details view paper
  • Downloaded 1,260 times
  • Download rankings, all-time:
    • Site-wide: 7,270 out of 83,779
    • In microbiology: 407 out of 7,127
  • Year to date:
    • Site-wide: 15,009 out of 83,779
  • Since beginning of last month:
    • Site-wide: 38,482 out of 83,779

Integrated Single-Cell Analysis of Multicellular Immune Dynamics during Hyper-Acute HIV-1 Infection

immunology more details view paper
  • Downloaded 997 times
  • Download rankings, all-time:
    • Site-wide: 10,670 out of 83,779
    • In immunology: 237 out of 2,339
  • Year to date:
    • Site-wide: 7,220 out of 83,779
  • Since beginning of last month:
    • Site-wide: 11,956 out of 83,779

Linking single-cell measurements of mass, growth rate, and gene expression

bioengineering more details view paper
  • Downloaded 967 times
  • Download rankings, all-time:
    • Site-wide: 11,215 out of 83,779
    • In bioengineering: 212 out of 1,817
  • Year to date:
    • Site-wide: 42,416 out of 83,779
  • Since beginning of last month:
    • Site-wide: 44,107 out of 83,779

High-throughput organoid screening enables engineering of intestinal epithelial composition

bioengineering more details view paper
  • Downloaded 833 times
  • Download rankings, all-time:
    • Site-wide: 14,100 out of 83,779
    • In bioengineering: 268 out of 1,817
  • Year to date:
    • Site-wide: 1,220 out of 83,779
  • Since beginning of last month:
    • Site-wide: 536 out of 83,779

Spatially-Resolved Live Cell Tagging and Isolation Using Protected Photoactivatable Cell Dyes

systems biology more details view paper
  • Downloaded 760 times
  • Download rankings, all-time:
    • Site-wide: 16,251 out of 83,779
    • In systems biology: 459 out of 2,221
  • Year to date:
    • Site-wide: 1,400 out of 83,779
  • Since beginning of last month:
    • Site-wide: 6,135 out of 83,779

Single-cell analysis of upper airway cells reveals host-viral dynamics in influenza infected adults

genomics more details view paper
  • Downloaded 561 times
  • Download rankings, all-time:
    • Site-wide: 25,207 out of 83,779
    • In genomics: 2,729 out of 5,409
  • Year to date:
    • Site-wide: 2,203 out of 83,779
  • Since beginning of last month:
    • Site-wide: 830 out of 83,779

IL-5Rα marks nasal polyp IgG4 and IgE-secreting cells in aspirin-exacerbated respiratory disease

immunology more details view paper
  • Downloaded 442 times
  • Download rankings, all-time:
    • Site-wide: 33,671 out of 83,779
    • In immunology: 770 out of 2,339
  • Year to date:
    • Site-wide: 38,055 out of 83,779
  • Since beginning of last month:
    • Site-wide: 35,450 out of 83,779

Single-cell analysis reveals mechanisms of plasticity of leukemia initiating cells

cancer biology more details view paper
  • Downloaded 260 times
  • Download rankings, all-time:
    • Site-wide: 55,169 out of 83,779
    • In cancer biology: 1,768 out of 2,924
  • Year to date:
    • Site-wide: 7,180 out of 83,779
  • Since beginning of last month:
    • Site-wide: 2,012 out of 83,779

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