Author: Mark Chaisson

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Preprints

Multi-platform discovery of haplotype-resolved structural variation in human genomes

• Downloaded 8,569 times
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  • Site-wide: 1,548
  • In genomics: 104
• Year to date:
  • Site-wide: 66,284
• Since beginning of last month:
  • Site-wide: 67,654

A robust benchmark for germline structural variant detection

• Downloaded 6,811 times
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  • Site-wide: 2,089
  • In genomics: 153
• Year to date:
  • Site-wide: 9,646
• Since beginning of last month:
  • Site-wide: 11,805

A fully phased accurate assembly of an individual human genome

• Downloaded 2,775 times
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  • Site-wide: 7,304
  • In bioinformatics: 688
• Year to date:
  • Site-wide: 42,810
• Since beginning of last month:
  • Site-wide: 54,296

Automated assembly of high-quality diploid human reference genomes

• Downloaded 2,341 times
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  • Site-wide: 9,375
  • In genomics: None
• Year to date:
  • Site-wide: 523
• Since beginning of last month:
  • Site-wide: 1,027

High-Quality Assembly of an Individual of Yoruban Descent

• Downloaded 1,564 times
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  • Site-wide: 17,170
  • In bioinformatics: 1,771
• Year to date:
  • Site-wide: 118,191
• Since beginning of last month:
  • Site-wide: 96,929

Profiling variable-number tandem repeat variation across populations using repeat-pangenome graphs

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• Download rankings, all-time:
  • Site-wide: 24,982
  • In bioinformatics: 2,727
• Year to date:
  • Site-wide: 52,082
• Since beginning of last month:
  • Site-wide: 25,999

lra: the Long Read Aligner for Sequences and Contigs

• Downloaded 1,077 times
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  • Site-wide: 30,486
  • In bioinformatics: 3,199
• Year to date:
  • Site-wide: 69,788
• Since beginning of last month:
  • Site-wide: 48,959

TT-Mars: Structural Variants Assessment Based on Haplotype-resolved Assemblies

• Downloaded 450 times
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  • Site-wide: 98,503
  • In genomics: 6,207
• Year to date:
  • Site-wide: 47,945
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  • Site-wide: 76,478

The motif composition of variable-number tandem repeats impacts gene expression

• Downloaded 315 times
• Download rankings, all-time:
  • Site-wide: 134,075
  • In genomics: None
• Year to date:
  • Site-wide: 10,160
• Since beginning of last month:
  • Site-wide: 23,872