Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,655 bioRxiv papers from 298,484 authors.

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Preprints

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

• Downloaded 8,816 times
• Download rankings, all-time:
  • Site-wide: 155 out of 67,655
  • In genomics: 46 out of 4,583
• Year to date:
  • Site-wide: 32 out of 67,655
• Since beginning of last month:
  • Site-wide: 97 out of 67,655

Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads

• Downloaded 3,065 times
• Download rankings, all-time:
  • Site-wide: 1,146 out of 67,655
  • In genomics: 267 out of 4,583
• Year to date:
  • Site-wide: 12,069 out of 67,655
• Since beginning of last month:
  • Site-wide: 10,930 out of 67,655

Uncovering hypergraphs of cell-cell interaction from single cell RNA-sequencing data

• Downloaded 1,944 times
• Download rankings, all-time:
  • Site-wide: 2,585 out of 67,655
  • In bioinformatics: 515 out of 6,659
• Year to date:
  • Site-wide: 582 out of 67,655
• Since beginning of last month:
  • Site-wide: 1,804 out of 67,655

SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

• Downloaded 1,672 times
• Download rankings, all-time:
  • Site-wide: 3,324 out of 67,655
  • In bioinformatics: 659 out of 6,659
• Year to date:
  • Site-wide: 45,338 out of 67,655
• Since beginning of last month:
  • Site-wide: 42,890 out of 67,655

Benchmarking principal component analysis for large-scale single-cell RNA-sequencing

• Downloaded 1,329 times
• Download rankings, all-time:
  • Site-wide: 4,900 out of 67,655
  • In bioinformatics: 944 out of 6,659
• Year to date:
  • Site-wide: 1,230 out of 67,655
• Since beginning of last month:
  • Site-wide: 2,517 out of 67,655

CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing

• Downloaded 1,272 times
• Download rankings, all-time:
  • Site-wide: 5,259 out of 67,655
  • In bioinformatics: 1,007 out of 6,659
• Year to date:
  • Site-wide: 10,675 out of 67,655
• Since beginning of last month:
  • Site-wide: 24,372 out of 67,655

Genome-wide analysis of transcriptional bursting-induced noise in mammalian cells

• Downloaded 828 times
• Download rankings, all-time:
  • Site-wide: 10,596 out of 67,655
  • In systems biology: 297 out of 1,872
• Year to date:
  • Site-wide: 2,793 out of 67,655
• Since beginning of last month:
  • Site-wide: 2,869 out of 67,655

Millefy: visualizing cell-to-cell heterogeneity in read coverage of single-cell RNA sequencing datasets

• Downloaded 633 times
• Download rankings, all-time:
  • Site-wide: 15,622 out of 67,655
  • In bioinformatics: 2,428 out of 6,659
• Year to date:
  • Site-wide: 4,453 out of 67,655
• Since beginning of last month:
  • Site-wide: 8,394 out of 67,655

A NMF-based approach to discover overlooked differentially expressed gene regions from single-cell RNA-seq data

• Downloaded 553 times
• Download rankings, all-time:
  • Site-wide: 18,815 out of 67,655
  • In bioinformatics: 2,813 out of 6,659
• Year to date:
  • Site-wide: 5,595 out of 67,655
• Since beginning of last month:
  • Site-wide: 10,468 out of 67,655

Local states of chromatin compaction at transcription start sites control transcription levels

• Downloaded 488 times
• Download rankings, all-time:
  • Site-wide: 22,010 out of 67,655
  • In molecular biology: 645 out of 2,165
• Year to date:
  • Site-wide: 6,918 out of 67,655
• Since beginning of last month:
  • Site-wide: 2,117 out of 67,655

An efficient gene regulatory network inference algorithm for early Drosophila melanogaster embryogenesis

• Downloaded 459 times
• Download rankings, all-time:
  • Site-wide: 23,751 out of 67,655
  • In bioinformatics: 3,328 out of 6,659
• Year to date:
  • Site-wide: 54,005 out of 67,655
• Since beginning of last month:
  • Site-wide: None out of 67,655