Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,343 bioRxiv papers from 319,280 authors.
Author: Itoshi Nikaido
- ORCiD: http://orcid.org/0000-0002-7261-2570
- Most recently observed institution: Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research
Rankings
- All-time downloads: 22,598 (rank: 1,297 out of 318,846)
- Categories:
- bioinformatics: 8,407 (rank: 485 out of 27,655)
- genomics: 12,700 (rank: 821 (tie) out of 35,538)
- molecular biology: 554 (rank: 4,992 (tie) out of 15,627)
- systems biology: 937 (rank: 2,501 (tie) out of 9,613)
Downloads per author, site-wide
Preprints
Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects
genomics more details view paper- Downloaded 9,600 times
- Download rankings, all-time:
- Site-wide: 154 out of 73,249
- In genomics: 41 out of 4,863
- Year to date:
- Site-wide: 259 out of 73,249
- Since beginning of last month:
- Site-wide: 259 out of 73,249
Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads
genomics more details view paper- Downloaded 3,100 times
- Download rankings, all-time:
- Site-wide: 1,250 out of 73,249
- In genomics: 281 out of 4,863
- Year to date:
- Site-wide: 27,296 out of 73,249
- Since beginning of last month:
- Site-wide: 27,296 out of 73,249
Uncovering hypergraphs of cell-cell interaction from single cell RNA-sequencing data
bioinformatics more details view paper- Downloaded 2,151 times
- Download rankings, all-time:
- Site-wide: 2,382 out of 73,249
- In bioinformatics: 470 out of 7,143
- Year to date:
- Site-wide: 2,553 out of 73,249
- Since beginning of last month:
- Site-wide: 2,553 out of 73,249
SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation
bioinformatics more details view paper- Downloaded 1,694 times
- Download rankings, all-time:
- Site-wide: 3,581 out of 73,249
- In bioinformatics: 706 out of 7,143
- Year to date:
- Site-wide: 44,424 out of 73,249
- Since beginning of last month:
- Site-wide: 44,424 out of 73,249
Benchmarking principal component analysis for large-scale single-cell RNA-sequencing
bioinformatics more details view paper- Downloaded 1,484 times
- Download rankings, all-time:
- Site-wide: 4,507 out of 73,249
- In bioinformatics: 861 out of 7,143
- Year to date:
- Site-wide: 4,552 out of 73,249
- Since beginning of last month:
- Site-wide: 4,552 out of 73,249
CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA-sequencing
bioinformatics more details view paper- Downloaded 1,310 times
- Download rankings, all-time:
- Site-wide: 5,526 out of 73,249
- In bioinformatics: 1,049 out of 7,143
- Year to date:
- Site-wide: 21,673 out of 73,249
- Since beginning of last month:
- Site-wide: 21,673 out of 73,249
Genome-wide analysis of transcriptional bursting-induced noise in mammalian cells
systems biology more details view paper- Downloaded 937 times
- Download rankings, all-time:
- Site-wide: 9,650 out of 73,249
- In systems biology: 274 out of 2,007
- Year to date:
- Site-wide: 6,971 out of 73,249
- Since beginning of last month:
- Site-wide: 6,971 out of 73,249
Millefy: visualizing cell-to-cell heterogeneity in read coverage of single-cell RNA sequencing datasets
bioinformatics more details view paper- Downloaded 682 times
- Download rankings, all-time:
- Site-wide: 15,572 out of 73,249
- In bioinformatics: 2,424 out of 7,143
- Year to date:
- Site-wide: 19,711 out of 73,249
- Since beginning of last month:
- Site-wide: 19,711 out of 73,249
A NMF-based approach to discover overlooked differentially expressed gene regions from single-cell RNA-seq data
bioinformatics more details view paper- Downloaded 583 times
- Download rankings, all-time:
- Site-wide: 19,499 out of 73,249
- In bioinformatics: 2,900 out of 7,143
- Year to date:
- Site-wide: 55,674 out of 73,249
- Since beginning of last month:
- Site-wide: 55,674 out of 73,249
Local states of chromatin compaction at transcription start sites control transcription levels
molecular biology more details view paper- Downloaded 554 times
- Download rankings, all-time:
- Site-wide: 20,861 out of 73,249
- In molecular biology: 622 out of 2,386
- Year to date:
- Site-wide: 24,734 out of 73,249
- Since beginning of last month:
- Site-wide: 24,734 out of 73,249
An efficient gene regulatory network inference algorithm for early Drosophila melanogaster embryogenesis
bioinformatics more details view paper- Downloaded 503 times
- Download rankings, all-time:
- Site-wide: 23,692 out of 73,249
- In bioinformatics: 3,314 out of 7,143
- Year to date:
- Site-wide: 65,383 out of 73,249
- Since beginning of last month:
- Site-wide: 65,383 out of 73,249
PanLingua
News
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!