Rxivist logo

Author: Pierre Peterlongo

  • ORCiD: http://orcid.org/0000-0003-0776-6407
  • Most recently observed institution: INRIA/IRISA, Genscale team, UMR6074 IRISA CNRS/INRIA/Université de Rennes 1, Campus de Beaulieu, 35042, Rennes, France

Rankings

  • All-time downloads: 18,617 (rank: 3,773 out of 428,087)
  • Categories:
    • bioinformatics: 12,169 (rank: 449 (tie) out of 36,286)
    • ecology: 1,231 (rank: 2,374 (tie) out of 18,707)
    • genomics: 5,217 (rank: 3,821 (tie) out of 44,718)

Downloads per author, site-wide

Preprints

Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software

bioinformatics more details view paper
  • Downloaded 6,865 times
  • Download rankings, all-time:
    • Site-wide: 522 out of 101,344
    • In bioinformatics: 72 out of 9,294
  • Year to date:
    • Site-wide: 15,946 out of 101,344
  • Since beginning of last month:
    • Site-wide: 20,986 out of 101,344

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,458 times
  • Download rankings, all-time:
    • Site-wide: 1,083 out of 101,344
    • In genomics: 216 out of 6,278
  • Year to date:
    • Site-wide: 14,788 out of 101,344
  • Since beginning of last month:
    • Site-wide: 11,439 out of 101,344

Clustering de Novo by Gene of Long Reads from Transcriptomics Data

bioinformatics more details view paper
  • Downloaded 1,902 times
  • Download rankings, all-time:
    • Site-wide: 4,608 out of 101,344
    • In bioinformatics: 826 out of 9,294
  • Year to date:
    • Site-wide: 40,184 out of 101,344
  • Since beginning of last month:
    • Site-wide: 37,909 out of 101,344

Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems

ecology more details view paper
  • Downloaded 1,231 times
  • Download rankings, all-time:
    • Site-wide: 9,565 out of 101,344
    • In ecology: 192 out of 4,430
  • Year to date:
    • Site-wide: 5,141 out of 101,344
  • Since beginning of last month:
    • Site-wide: 6,577 out of 101,344

DiscoSnp-RAD: de novo detection of small variants for population genomics

bioinformatics more details view paper
  • Downloaded 752 times
  • Download rankings, all-time:
    • Site-wide: 20,921 out of 101,344
    • In bioinformatics: 3,023 out of 9,294
  • Year to date:
    • Site-wide: 51,134 out of 101,344
  • Since beginning of last month:
    • Site-wide: 70,789 out of 101,344

DiscoSnp++: de novo detection of small variants from raw unassembled read set(s)

bioinformatics more details view paper
  • Downloaded 705 times
  • Download rankings, all-time:
    • Site-wide: 23,061 out of 101,344
    • In bioinformatics: 3,235 out of 9,294
  • Year to date:
    • Site-wide: 34,545 out of 101,344
  • Since beginning of last month:
    • Site-wide: 16,096 out of 101,344

SVJedi: Genotyping structural variations with long reads

bioinformatics more details view paper
  • Downloaded 579 times
  • Download rankings, all-time:
    • Site-wide: 30,269 out of 101,344
    • In bioinformatics: 3,978 out of 9,294
  • Year to date:
    • Site-wide: 13,023 out of 101,344
  • Since beginning of last month:
    • Site-wide: 28,374 out of 101,344

ELECTOR: Evaluator for long reads correction methods

bioinformatics more details view paper
  • Downloaded 578 times
  • Download rankings, all-time:
    • Site-wide: 30,332 out of 101,344
    • In bioinformatics: 3,983 out of 9,294
  • Year to date:
    • Site-wide: 70,465 out of 101,344
  • Since beginning of last month:
    • Site-wide: 69,046 out of 101,344

Toward perfect reads: short reads correction via mapping on compacted de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 559 times
  • Download rankings, all-time:
    • Site-wide: 31,708 out of 101,344
    • In bioinformatics: 4,118 out of 9,294
  • Year to date:
    • Site-wide: 69,273 out of 101,344
  • Since beginning of last month:
    • Site-wide: 69,591 out of 101,344

Investigating Population-scale Allele Specific Expression in Wild Populations of Oithona similis (Cyclopoida, Claus 1866)

genomics more details view paper
  • Downloaded 461 times
  • Download rankings, all-time:
    • Site-wide: 40,334 out of 101,344
    • In genomics: 3,750 out of 6,278
  • Year to date:
    • Site-wide: 40,882 out of 101,344
  • Since beginning of last month:
    • Site-wide: 45,407 out of 101,344

A de novo approach to disentangle partner identity and function in holobiont systems

genomics more details view paper
  • Downloaded 298 times
  • Download rankings, all-time:
    • Site-wide: 61,678 out of 101,344
    • In genomics: 4,813 out of 6,278
  • Year to date:
    • Site-wide: 98,556 out of 101,344
  • Since beginning of last month:
    • Site-wide: 98,439 out of 101,344

metaVaR: introducing metavariant species models for reference-free metagenomic-based population genomics

bioinformatics more details view paper
  • Downloaded 229 times
  • Download rankings, all-time:
    • Site-wide: 73,690 out of 101,344
    • In bioinformatics: 7,502 out of 9,294
  • Year to date:
    • Site-wide: 24,526 out of 101,344
  • Since beginning of last month:
    • Site-wide: 76,469 out of 101,344

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
  • 13 Jan 2019: The Rxivist preprint is live!