Author: Pejman Mohammadi

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Preprints

Tools and best practices for allelic expression analysis

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The GTEx Consortium atlas of genetic regulatory effects across human tissues

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Local genetic effects on gene expression across 44 human tissues

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Modified penetrance of coding variants by cis-regulatory variation shapes human traits

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Distant regulatory effects of genetic variation in multiple human tissues

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Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change

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Diverse transcriptomic signatures across human tissues identify functional rare genetic variation

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Rare variant phasing and haplotypic expression from RNA-sequencing with phASER

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Quantifying genetic regulatory variation in human populations improves transcriptome analysis in rare disease patients

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Heterozygous gene truncation delineates the human haploinsufficient genome

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A vast resource of allelic expression data spanning human tissues

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Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations

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Analysis of stop-gain and frameshift variants in human innate immunity genes

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RecNW: A fast pairwise aligner for targeted sequencing

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EdiTyper: a high-throughput tool for analysis of targeted sequencing data from genome editing experiments

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