Author: Pejman Mohammadi

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Preprints

Tools and best practices for allelic expression analysis

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  • Site-wide: 988
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  • Site-wide: 14,210
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  • Site-wide: 9,076

The GTEx Consortium atlas of genetic regulatory effects across human tissues

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  • Site-wide: 1,026
  • In genetics: 29
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  • Site-wide: 4,048
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  • Site-wide: 5,243

Local genetic effects on gene expression across 44 human tissues

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  • Site-wide: 2,342
  • In genomics: 257
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  • Site-wide: 57,102
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  • Site-wide: 53,501

Modified penetrance of coding variants by cis-regulatory variation shapes human traits

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  • Site-wide: 2,776
  • In genetics: 105
• Year to date:
  • Site-wide: 72,981
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  • Site-wide: 62,613

Distant regulatory effects of genetic variation in multiple human tissues

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  • Site-wide: 4,634
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• Year to date:
  • Site-wide: 66,386
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  • Site-wide: 67,485

Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change

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  • Site-wide: 6,232
  • In bioinformatics: 716
• Year to date:
  • Site-wide: 47,460
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  • Site-wide: 66,532

Transcriptome variation in human tissues revealed by long-read sequencing

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  • Site-wide: 6,548
  • In genomics: 727
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  • Site-wide: 425
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Diverse transcriptomic signatures across human tissues identify functional rare genetic variation

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  • Site-wide: 7,977
  • In genomics: 869
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  • Site-wide: 31,934
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  • Site-wide: 42,256

Rare variant phasing and haplotypic expression from RNA-sequencing with phASER

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  • Site-wide: 8,749
  • In genetics: 410
• Year to date:
  • Site-wide: 23,432
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  • Site-wide: 11,725

Quantifying genetic regulatory variation in human populations improves transcriptome analysis in rare disease patients

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  • Site-wide: 12,517
  • In genomics: 1,352
• Year to date:
  • Site-wide: 50,050
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  • Site-wide: 35,284

Heterozygous gene truncation delineates the human haploinsufficient genome

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  • Site-wide: 15,106
  • In genomics: 1,564
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  • Site-wide: 73,272
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  • Site-wide: 66,932

A vast resource of allelic expression data spanning human tissues

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  • Site-wide: 16,084
  • In genomics: 1,655
• Year to date:
  • Site-wide: 49,238
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  • Site-wide: 64,728

Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations

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  • Site-wide: 20,087
  • In genetics: 966
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  • Site-wide: 96,121
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  • Site-wide: 118,838

Integrative analyses identify susceptibility genes underlying COVID-19 hospitalization

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  • Site-wide: 29,226
  • In genetic and genomic medicine: 90
• Year to date:
  • Site-wide: 6,284
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  • Site-wide: 13,599

Analysis of stop-gain and frameshift variants in human innate immunity genes

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  • In bioinformatics: 3,424
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  • Site-wide: 78,120
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  • Site-wide: 56,576

RecNW: A fast pairwise aligner for targeted sequencing

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  • Site-wide: 59,696
  • In bioinformatics: 5,953
• Year to date:
  • Site-wide: 66,784
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  • Site-wide: 61,183

EdiTyper: a high-throughput tool for analysis of targeted sequencing data from genome editing experiments

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  • Site-wide: 112,204
  • In genomics: 6,355
• Year to date:
  • Site-wide: 105,943
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  • Site-wide: 102,588