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Author: Pejman Mohammadi

Rankings

  • All-time downloads: 35,726 (rank: 1,094 out of 380,089)
  • Categories:
    • bioinformatics: 3,213 (rank: 3,085 out of 32,573)
    • genetics: 12,716 (rank: 870 out of 35,084)
    • genomics: 19,797 (rank: 439 out of 40,563)

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Preprints

Tools and best practices for allelic expression analysis

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The GTEx Consortium atlas of genetic regulatory effects across human tissues

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Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
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    • In genomics: 207 out of 5,656
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Modified penetrance of coding variants by cis-regulatory variation shapes human traits

genetics more details view paper
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Distant regulatory effects of genetic variation in multiple human tissues

genomics more details view paper
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Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change

bioinformatics more details view paper
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Rare variant phasing and haplotypic expression from RNA-sequencing with phASER

genetics more details view paper
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Diverse transcriptomic signatures across human tissues identify functional rare genetic variation

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    • Site-wide: 3,661 out of 88,646

Quantifying genetic regulatory variation in human populations improves transcriptome analysis in rare disease patients

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    • Site-wide: 11,788 out of 88,646

Heterozygous gene truncation delineates the human haploinsufficient genome

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    • In genomics: 1,343 out of 5,656
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    • Site-wide: 25,250 out of 88,646

Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations

genetics more details view paper
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    • In genetics: 791 out of 4,596
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    • Site-wide: 83,441 out of 88,646

A vast resource of allelic expression data spanning human tissues

genomics more details view paper
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    • In genomics: 1,720 out of 5,656
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    • Site-wide: 5,127 out of 88,646

Analysis of stop-gain and frameshift variants in human innate immunity genes

bioinformatics more details view paper
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    • In bioinformatics: 2,773 out of 8,385
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    • Site-wide: 72,106 out of 88,646

RecNW: A fast pairwise aligner for targeted sequencing

bioinformatics more details view paper
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    • In bioinformatics: 5,166 out of 8,385
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  • Since beginning of last month:
    • Site-wide: 75,230 out of 88,646

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