Author: Pejman Mohammadi

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Preprints

Tools and best practices for allelic expression analysis

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  • Site-wide: 887
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  • Site-wide: 25,398
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  • Site-wide: 16,836

The GTEx Consortium atlas of genetic regulatory effects across human tissues

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  • Site-wide: 938
  • In genetics: 29
• Year to date:
  • Site-wide: 2,785
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  • Site-wide: 4,345

Local genetic effects on gene expression across 44 human tissues

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  • Site-wide: 2,061
  • In genomics: 239
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  • Site-wide: 79,001
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  • Site-wide: 29,555

Modified penetrance of coding variants by cis-regulatory variation shapes human traits

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  • Site-wide: 2,432
  • In genetics: 101
• Year to date:
  • Site-wide: 92,464
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  • Site-wide: 81,831

Distant regulatory effects of genetic variation in multiple human tissues

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  • Site-wide: 4,089
  • In genomics: 487
• Year to date:
  • Site-wide: 61,906
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  • Site-wide: 35,774

Quantifying the regulatory effect size of cis-acting genetic variation using allelic fold change

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  • Site-wide: 5,601
  • In bioinformatics: 682
• Year to date:
  • Site-wide: 37,994
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  • Site-wide: 41,982

Diverse transcriptomic signatures across human tissues identify functional rare genetic variation

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  • Site-wide: 7,432
  • In genomics: 850
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  • Site-wide: None
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  • Site-wide: 41,753

Rare variant phasing and haplotypic expression from RNA-sequencing with phASER

• Downloaded 1,696 times
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  • Site-wide: 8,318
  • In genetics: 422
• Year to date:
  • Site-wide: 60,576
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  • Site-wide: 45,479

Quantifying genetic regulatory variation in human populations improves transcriptome analysis in rare disease patients

• Downloaded 1,368 times
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  • Site-wide: 11,531
  • In genomics: 1,300
• Year to date:
  • Site-wide: 53,679
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  • Site-wide: 94,180

Heterozygous gene truncation delineates the human haploinsufficient genome

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  • Site-wide: 13,733
  • In genomics: 1,500
• Year to date:
  • Site-wide: 99,862
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  • Site-wide: 32,077

A vast resource of allelic expression data spanning human tissues

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  • Site-wide: 14,798
  • In genomics: 1,607
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  • Site-wide: 25,141
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  • Site-wide: 47,698

Genetic regulatory effects modified by immune activation contribute to autoimmune disease associations

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  • Site-wide: 18,054
  • In genetics: 926
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  • Site-wide: 52,848
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  • Site-wide: 104,760

Analysis of stop-gain and frameshift variants in human innate immunity genes

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  • Site-wide: 27,727
  • In bioinformatics: 3,281
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  • Site-wide: 75,298
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  • Site-wide: 113,869

Integrative analyses identify susceptibility genes underlying COVID-19 hospitalization

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  • Site-wide: 41,143
  • In genetic and genomic medicine: 106
• Year to date:
  • Site-wide: 2,984
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  • Site-wide: 585

RecNW: A fast pairwise aligner for targeted sequencing

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  • Site-wide: 57,478
  • In bioinformatics: 5,840
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  • Site-wide: 72,475
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  • Site-wide: 116,033

EdiTyper: a high-throughput tool for analysis of targeted sequencing data from genome editing experiments

• Downloaded 168 times
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  • Site-wide: 103,600
  • In genomics: 6,044
• Year to date:
  • Site-wide: 34,530
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  • Site-wide: 99,036