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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 57,661 bioRxiv papers from 265,440 authors.

Author: Sohrab P Shah

Rankings

  • All-time downloads: 14,854 (rank: 1,853 out of 265,440)
  • Categories:
    • bioinformatics: 8,042 (rank: 387 (tie) out of 23,176)
    • cancer biology: 2,737 (rank: 516 (tie) out of 15,374)
    • genomics: 4,075 (rank: 3,089 out of 30,324)

Downloads per author, site-wide

Preprints

Dissociation of solid tumour tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase associated stress responses

genomics more details view paper
  • Downloaded 2,950 times
  • Download rankings, all-time:
    • Site-wide: 1,022 out of 57,661
    • In genomics: 249 out of 4,052
  • Year to date:
    • Site-wide: 131 out of 57,661
  • Since beginning of last month:
    • Site-wide: 14 out of 57,661

Probabilistic cell type assignment of single-cell transcriptomic data reveals spatiotemporal microenvironment dynamics in human cancers

bioinformatics more details view paper
  • Downloaded 2,933 times
  • Download rankings, all-time:
    • Site-wide: 1,036 out of 57,661
    • In bioinformatics: 210 out of 5,888
  • Year to date:
    • Site-wide: 135 out of 57,661
  • Since beginning of last month:
    • Site-wide: 429 out of 57,661

Interpretable dimensionality reduction of single cell transcriptome data with deep generative models

bioinformatics more details view paper
  • Downloaded 1,729 times
  • Download rankings, all-time:
    • Site-wide: 2,639 out of 57,661
    • In bioinformatics: 539 out of 5,888
  • Year to date:
    • Site-wide: 27,604 out of 57,661
  • Since beginning of last month:
    • Site-wide: 27,358 out of 57,661

clonealign: statistical integration of independent single-cell RNA & DNA-seq from human cancers

bioinformatics more details view paper
  • Downloaded 1,587 times
  • Download rankings, all-time:
    • Site-wide: 3,042 out of 57,661
    • In bioinformatics: 617 out of 5,888
  • Year to date:
    • Site-wide: 3,711 out of 57,661
  • Since beginning of last month:
    • Site-wide: 17,863 out of 57,661

The interface of malignant and immunologic clonal dynamics in high-grade serous ovarian cancer

cancer biology more details view paper
  • Downloaded 1,457 times
  • Download rankings, all-time:
    • Site-wide: 3,502 out of 57,661
    • In cancer biology: 86 out of 1,865
  • Year to date:
    • Site-wide: 34,416 out of 57,661
  • Since beginning of last month:
    • Site-wide: 32,654 out of 57,661

Kronos: a workflow assembler for genome analytics and informatics

bioinformatics more details view paper
  • Downloaded 1,213 times
  • Download rankings, all-time:
    • Site-wide: 4,717 out of 57,661
    • In bioinformatics: 933 out of 5,888
  • Year to date:
    • Site-wide: 38,001 out of 57,661
  • Since beginning of last month:
    • Site-wide: 34,367 out of 57,661

E-scape: Interactive visualization of single cell phylogenetics and spatio-temporal evolution in cancer

cancer biology more details view paper
  • Downloaded 846 times
  • Download rankings, all-time:
    • Site-wide: 8,448 out of 57,661
    • In cancer biology: 227 out of 1,865
  • Year to date:
    • Site-wide: 26,163 out of 57,661
  • Since beginning of last month:
    • Site-wide: 17,862 out of 57,661

Epiclomal: probabilistic clustering of sparse single-cell DNA methylation data

genomics more details view paper
  • Downloaded 719 times
  • Download rankings, all-time:
    • Site-wide: 10,767 out of 57,661
    • In genomics: 1,549 out of 4,052
  • Year to date:
    • Site-wide: 6,584 out of 57,661
  • Since beginning of last month:
    • Site-wide: 19,848 out of 57,661

deStruct: Accurate Rearrangement Detection using Breakpoint Specific Realignment

bioinformatics more details view paper
  • Downloaded 580 times
  • Download rankings, all-time:
    • Site-wide: 14,517 out of 57,661
    • In bioinformatics: 2,326 out of 5,888
  • Year to date:
    • Site-wide: 34,631 out of 57,661
  • Since beginning of last month:
    • Site-wide: 28,570 out of 57,661

Non-coding Somatic Mutations Converge on the PAX8 Pathway in Epithelial Ovarian Cancer

cancer biology more details view paper
  • Downloaded 434 times
  • Download rankings, all-time:
    • Site-wide: 20,714 out of 57,661
    • In cancer biology: 623 out of 1,865
  • Year to date:
    • Site-wide: 4,562 out of 57,661
  • Since beginning of last month:
    • Site-wide: 3,413 out of 57,661

Enhancing Knowledge Discovery from Cancer Genomics Data with Galaxy

genomics more details view paper
  • Downloaded 406 times
  • Download rankings, all-time:
    • Site-wide: 22,310 out of 57,661
    • In genomics: 2,466 out of 4,052
  • Year to date:
    • Site-wide: 50,045 out of 57,661
  • Since beginning of last month:
    • Site-wide: 51,261 out of 57,661

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