Rxivist logo

Author: Xiaohui Xie

  • Most recently observed institution: Department of Computer Science, University of California

Rankings

  • All-time downloads: 25,932 (rank: 1,896 out of 393,360)
  • Categories:
    • bioengineering: 2,141 (rank: 660 (tie) out of 11,479)
    • bioinformatics: 14,063 (rank: 341 out of 33,499)
    • developmental biology: 573 (rank: 5,487 (tie) out of 15,300)
    • genomics: 7,152 (rank: 2,307 (tie) out of 41,868)
    • synthetic biology: 2,003 (rank: 523 (tie) out of 4,094)

Downloads per author, site-wide

Preprints

Gene expression inference with deep learning

bioinformatics more details view paper
  • Downloaded 5,987 times
  • Download rankings, all-time:
    • Site-wide: 570 out of 92,068
    • In bioinformatics: 87 out of 8,636
  • Year to date:
    • Site-wide: 6,838 out of 92,068
  • Since beginning of last month:
    • Site-wide: 32,920 out of 92,068

FactorNet: a deep learning framework for predicting cell type specific transcription factor binding from nucleotide-resolution sequential data

genomics more details view paper
  • Downloaded 3,606 times
  • Download rankings, all-time:
    • Site-wide: 1,397 out of 92,068
    • In genomics: 295 out of 5,810
  • Year to date:
    • Site-wide: 8,600 out of 92,068
  • Since beginning of last month:
    • Site-wide: 15,789 out of 92,068

DanQ: a hybrid convolutional and recurrent deep neural network for quantifying the function of DNA sequences

genomics more details view paper
  • Downloaded 3,546 times
  • Download rankings, all-time:
    • Site-wide: 1,436 out of 92,068
    • In genomics: 300 out of 5,810
  • Year to date:
    • Site-wide: 42,451 out of 92,068
  • Since beginning of last month:
    • Site-wide: 38,527 out of 92,068

Understanding sequence conservation with deep learning

bioinformatics more details view paper
  • Downloaded 2,730 times
  • Download rankings, all-time:
    • Site-wide: 2,258 out of 92,068
    • In bioinformatics: 405 out of 8,636
  • Year to date:
    • Site-wide: 21,161 out of 92,068
  • Since beginning of last month:
    • Site-wide: 23,101 out of 92,068

DNA writing at a single genomic site enables lineage tracing and analog recording in mammalian cells

synthetic biology more details view paper
  • Downloaded 2,003 times
  • Download rankings, all-time:
    • Site-wide: 3,758 out of 92,068
    • In synthetic biology: 57 out of 867
  • Year to date:
    • Site-wide: 3,786 out of 92,068
  • Since beginning of last month:
    • Site-wide: 5,763 out of 92,068

AnatomyNet: Deep 3D Squeeze-and-excitation U-Nets for fast and fully automated whole-volume anatomical segmentation

bioengineering more details view paper
  • Downloaded 1,948 times
  • Download rankings, all-time:
    • Site-wide: 3,940 out of 92,068
    • In bioengineering: 73 out of 2,080
  • Year to date:
    • Site-wide: 7,157 out of 92,068
  • Since beginning of last month:
    • Site-wide: 8,007 out of 92,068

HLA class I binding prediction via convolutional neural networks

bioinformatics more details view paper
  • Downloaded 1,109 times
  • Download rankings, all-time:
    • Site-wide: 10,061 out of 92,068
    • In bioinformatics: 1,654 out of 8,636
  • Year to date:
    • Site-wide: 63,048 out of 92,068
  • Since beginning of last month:
    • Site-wide: 53,652 out of 92,068

DeepLung: 3D Deep Convolutional Nets for Automated Pulmonary Nodule Detection and Classification

bioinformatics more details view paper
  • Downloaded 1,101 times
  • Download rankings, all-time:
    • Site-wide: 10,193 out of 92,068
    • In bioinformatics: 1,683 out of 8,636
  • Year to date:
    • Site-wide: 48,482 out of 92,068
  • Since beginning of last month:
    • Site-wide: 31,466 out of 92,068

Deep Multi-instance Networks with Sparse Label Assignment for Whole Mammogram Classification

bioinformatics more details view paper
  • Downloaded 955 times
  • Download rankings, all-time:
    • Site-wide: 12,776 out of 92,068
    • In bioinformatics: 2,037 out of 8,636
  • Year to date:
    • Site-wide: 56,728 out of 92,068
  • Since beginning of last month:
    • Site-wide: 54,254 out of 92,068

Predicting transcription factor binding in single cells through deep learning

bioinformatics more details view paper
  • Downloaded 714 times
  • Download rankings, all-time:
    • Site-wide: 19,954 out of 92,068
    • In bioinformatics: 2,929 out of 8,636
  • Year to date:
    • Site-wide: 2,747 out of 92,068
  • Since beginning of last month:
    • Site-wide: 7,653 out of 92,068

Adversarial Deep Structural Networks for Mammographic Mass Segmentation

bioinformatics more details view paper
  • Downloaded 699 times
  • Download rankings, all-time:
    • Site-wide: 20,622 out of 92,068
    • In bioinformatics: 3,004 out of 8,636
  • Year to date:
    • Site-wide: 67,125 out of 92,068
  • Since beginning of last month:
    • Site-wide: 26,932 out of 92,068

The Effect Of Nipped-B-Like (Nipbl) Haploinsufficiency On Genome-Wide Cohesin Binding And Target Gene Expression: Modeling Cornelia de Lange Syndrome

developmental biology more details view paper
  • Downloaded 573 times
  • Download rankings, all-time:
    • Site-wide: 27,272 out of 92,068
    • In developmental biology: 730 out of 2,731
  • Year to date:
    • Site-wide: 65,111 out of 92,068
  • Since beginning of last month:
    • Site-wide: 50,992 out of 92,068

Parallelized Inference for Single Cell Transcriptomic Clustering with Split Merge Sampling on DPMM Model

bioinformatics more details view paper
  • Downloaded 413 times
  • Download rankings, all-time:
    • Site-wide: 40,444 out of 92,068
    • In bioinformatics: 4,918 out of 8,636
  • Year to date:
    • Site-wide: 79,541 out of 92,068
  • Since beginning of last month:
    • Site-wide: 43,863 out of 92,068

DeepEM: Deep 3D ConvNets With EM For Weakly Supervised Pulmonary Nodule Detection

bioinformatics more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 47,192 out of 92,068
    • In bioinformatics: 5,476 out of 8,636
  • Year to date:
    • Site-wide: 65,570 out of 92,068
  • Since beginning of last month:
    • Site-wide: 48,854 out of 92,068

Neural Multi-Scale Self-Supervised Registration for Echocardiogram Dense Tracking

bioengineering more details view paper
  • Downloaded 193 times
  • Download rankings, all-time:
    • Site-wide: 72,400 out of 92,068
    • In bioengineering: 1,475 out of 2,080
  • Year to date:
    • Site-wide: 54,589 out of 92,068
  • Since beginning of last month:
    • Site-wide: 52,112 out of 92,068

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News