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Author: Ross C Hardison

Rankings

  • All-time downloads: 16,886 (rank: 9,159 (tie) )
  • Categories:
    • bioinformatics: 6,252 (rank: 1,551 (tie) )
    • developmental biology: 1,699 (rank: 1,483 (tie) )
    • genomics: 3,788 (rank: 6,062 (tie) )
    • molecular biology: 1,300 (rank: 3,503 (tie) )
    • systems biology: 3,847 (rank: 814 (tie) )

Downloads per author, site-wide

Preprints

Transcriptional burst initiation and polymerase pause release are key control points of transcriptional regulation

systems biology more details view paper
  • Downloaded 3,847 times
  • Download rankings, all-time:
    • Site-wide: 2,512
    • In systems biology: 37
  • Year to date:
    • Site-wide: 55,728
  • Since beginning of last month:
    • Site-wide: 96,076

Re-configuration of Chromatin Structure During the Mitosis-G1 Phase Transition

genomics more details view paper
  • Downloaded 1,777 times
  • Download rankings, all-time:
    • Site-wide: 7,750
    • In genomics: 887
  • Year to date:
    • Site-wide: 35,957
  • Since beginning of last month:
    • Site-wide: 63,692

HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient

bioinformatics more details view paper
  • Downloaded 1,746 times
  • Download rankings, all-time:
    • Site-wide: 7,967
    • In bioinformatics: 1,012
  • Year to date:
    • Site-wide: 25,759
  • Since beginning of last month:
    • Site-wide: 75,903

The changing mouse embryo transcriptome at whole tissue and single-cell resolution

developmental biology more details view paper
  • Downloaded 1,699 times
  • Download rankings, all-time:
    • Site-wide: 8,288
    • In developmental biology: 105
  • Year to date:
    • Site-wide: 8,813
  • Since beginning of last month:
    • Site-wide: 13,154

Hierarchical Domain Structure Reveals the Divergence of Activity among TADs and Boundaries

bioinformatics more details view paper
  • Downloaded 1,040 times
  • Download rankings, all-time:
    • Site-wide: 17,371
    • In bioinformatics: 2,163
  • Year to date:
    • Site-wide: 83,163
  • Since beginning of last month:
    • Site-wide: 98,315

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

genomics more details view paper
  • Downloaded 888 times
  • Download rankings, all-time:
    • Site-wide: 21,920
    • In genomics: 2,201
  • Year to date:
    • Site-wide: 17,613
  • Since beginning of last month:
    • Site-wide: 53,296

S3norm: simultaneous normalization of sequencing depth and signal-to-noise ratio in epigenomic data

bioinformatics more details view paper
  • Downloaded 876 times
  • Download rankings, all-time:
    • Site-wide: 22,371
    • In bioinformatics: 2,735
  • Year to date:
    • Site-wide: 36,299
  • Since beginning of last month:
    • Site-wide: 45,137

A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition

molecular biology more details view paper
  • Downloaded 836 times
  • Download rankings, all-time:
    • Site-wide: 23,941
    • In molecular biology: 658
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 119,872

Bayesian Modeling of Epigenetic Variation in Multiple Human Cell Types

bioinformatics more details view paper
  • Downloaded 813 times
  • Download rankings, all-time:
    • Site-wide: 24,900
    • In bioinformatics: 3,016
  • Year to date:
    • Site-wide: 107,107
  • Since beginning of last month:
    • Site-wide: 95,350

Genome-wide comparative analysis reveals human- mouse regulatory landscape and evolution

bioinformatics more details view paper
  • Downloaded 761 times
  • Download rankings, all-time:
    • Site-wide: 27,225
    • In bioinformatics: 3,236
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 110,276

Snapshot: clustering and visualizing epigenetic history during cell differentiation

bioinformatics more details view paper
  • Downloaded 696 times
  • Download rankings, all-time:
    • Site-wide: 30,840
    • In bioinformatics: 3,566
  • Year to date:
    • Site-wide: 38,881
  • Since beginning of last month:
    • Site-wide: 79,748

ZNF410 uniquely activates the NuRD component CHD4 to silence fetal hemoglobin expression

molecular biology more details view paper
  • Downloaded 464 times
  • Download rankings, all-time:
    • Site-wide: 51,035
    • In molecular biology: 1,463
  • Year to date:
    • Site-wide: 13,163
  • Since beginning of last month:
    • Site-wide: 5,043

Accurate and Reproducible Functional Maps in 127 Human Cell Types via 2D Genome Segmentation

genomics more details view paper
  • Downloaded 452 times
  • Download rankings, all-time:
    • Site-wide: 52,409
    • In genomics: 4,071
  • Year to date:
    • Site-wide: 56,924
  • Since beginning of last month:
    • Site-wide: 43,386

Effects of sheared chromatin length on ChIP-seq quality and sensitivity

genomics more details view paper
  • Downloaded 277 times
  • Download rankings, all-time:
    • Site-wide: 80,935
    • In genomics: 5,282
  • Year to date:
    • Site-wide: 55,490
  • Since beginning of last month:
    • Site-wide: 54,316

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of mouse hematopoietic cells

genomics more details view paper
  • Downloaded 275 times
  • Download rankings, all-time:
    • Site-wide: 81,395
    • In genomics: 5,301
  • Year to date:
    • Site-wide: 78,889
  • Since beginning of last month:
    • Site-wide: 108,540

High-dimensional association detection in large scale genomic data

bioinformatics more details view paper
  • Downloaded 241 times
  • Download rankings, all-time:
    • Site-wide: 88,465
    • In bioinformatics: 7,890
  • Year to date:
    • Site-wide: 12,068
  • Since beginning of last month:
    • Site-wide: 16,323

Detecting local changes in chromatin architecture with false discovery control

genomics more details view paper
  • Downloaded 119 times
  • Download rankings, all-time:
    • Site-wide: 112,547
    • In genomics: 6,327
  • Year to date:
    • Site-wide: 101,821
  • Since beginning of last month:
    • Site-wide: 55,185

S3V2-IDEAS: a package for normalizing, denoising and integrating epigenomic datasets across different cell types

bioinformatics more details view paper
  • Downloaded 79 times
  • Download rankings, all-time:
    • Site-wide: 119,130
    • In bioinformatics: 9,669
  • Year to date:
    • Site-wide: 16,307
  • Since beginning of last month:
    • Site-wide: 77,908

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