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Author: Ross C. Hardison

Rankings

  • All-time downloads: 15,783 (rank: 5,031 out of 426,934)
  • Categories:
    • bioinformatics: 5,766 (rank: 1,658 (tie) out of 36,221)
    • developmental biology: 1,565 (rank: 1,545 (tie) out of 17,001)
    • genomics: 3,576 (rank: 6,074 out of 44,673)
    • molecular biology: 1,065 (rank: 4,044 (tie) out of 23,456)
    • systems biology: 3,811 (rank: 738 (tie) out of 12,484)

Downloads per author, site-wide

Preprints

Transcriptional burst initiation and polymerase pause release are key control points of transcriptional regulation

systems biology more details view paper
  • Downloaded 3,811 times
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    • In systems biology: 32 out of 2,566
  • Year to date:
    • Site-wide: 22,002 out of 101,077
  • Since beginning of last month:
    • Site-wide: 63,500 out of 101,077

Re-configuration of Chromatin Structure During the Mitosis-G1 Phase Transition

genomics more details view paper
  • Downloaded 1,745 times
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    • Site-wide: 5,304 out of 101,077
    • In genomics: 853 out of 6,266
  • Year to date:
    • Site-wide: 20,080 out of 101,077
  • Since beginning of last month:
    • Site-wide: 24,756 out of 101,077

HiCRep: assessing the reproducibility of Hi-C data using a stratum-adjusted correlation coefficient

bioinformatics more details view paper
  • Downloaded 1,703 times
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    • Site-wide: 5,506 out of 101,077
    • In bioinformatics: 962 out of 9,276
  • Year to date:
    • Site-wide: 56,930 out of 101,077
  • Since beginning of last month:
    • Site-wide: 49,701 out of 101,077

The changing mouse embryo transcriptome at whole tissue and single-cell resolution

developmental biology more details view paper
  • Downloaded 1,565 times
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    • Site-wide: 6,358 out of 101,077
    • In developmental biology: 117 out of 3,018
  • Year to date:
    • Site-wide: 1,312 out of 101,077
  • Since beginning of last month:
    • Site-wide: 3,470 out of 101,077

Hierarchical Domain Structure Reveals the Divergence of Activity among TADs and Boundaries

bioinformatics more details view paper
  • Downloaded 1,013 times
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    • Site-wide: 13,125 out of 101,077
    • In bioinformatics: 2,039 out of 9,276
  • Year to date:
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  • Since beginning of last month:
    • Site-wide: 52,241 out of 101,077

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

genomics more details view paper
  • Downloaded 836 times
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    • Site-wide: 17,821 out of 101,077
    • In genomics: 2,183 out of 6,266
  • Year to date:
    • Site-wide: 9,257 out of 101,077
  • Since beginning of last month:
    • Site-wide: 32,860 out of 101,077

A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition

molecular biology more details view paper
  • Downloaded 827 times
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    • In molecular biology: 600 out of 3,508
  • Year to date:
    • Site-wide: 73,411 out of 101,077
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    • Site-wide: 45,380 out of 101,077

Bayesian Modeling of Epigenetic Variation in Multiple Human Cell Types

bioinformatics more details view paper
  • Downloaded 804 times
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    • Site-wide: 18,949 out of 101,077
    • In bioinformatics: 2,794 out of 9,276
  • Year to date:
    • Site-wide: 91,379 out of 101,077
  • Since beginning of last month:
    • Site-wide: 99,193 out of 101,077

S3norm: simultaneous normalization of sequencing depth and signal-to-noise ratio in epigenomic data

bioinformatics more details view paper
  • Downloaded 799 times
  • Download rankings, all-time:
    • Site-wide: 19,127 out of 101,077
    • In bioinformatics: 2,814 out of 9,276
  • Year to date:
    • Site-wide: 16,823 out of 101,077
  • Since beginning of last month:
    • Site-wide: 27,056 out of 101,077

Genome-wide comparative analysis reveals human- mouse regulatory landscape and evolution

bioinformatics more details view paper
  • Downloaded 750 times
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    • Site-wide: 20,951 out of 101,077
    • In bioinformatics: 3,025 out of 9,276
  • Year to date:
    • Site-wide: 88,555 out of 101,077
  • Since beginning of last month:
    • Site-wide: 80,520 out of 101,077

Snapshot: clustering and visualizing epigenetic history during cell differentiation

bioinformatics more details view paper
  • Downloaded 662 times
  • Download rankings, all-time:
    • Site-wide: 25,264 out of 101,077
    • In bioinformatics: 3,473 out of 9,276
  • Year to date:
    • Site-wide: 50,769 out of 101,077
  • Since beginning of last month:
    • Site-wide: 55,941 out of 101,077

Accurate and Reproducible Functional Maps in 127 Human Cell Types via 2D Genome Segmentation

genomics more details view paper
  • Downloaded 421 times
  • Download rankings, all-time:
    • Site-wide: 44,662 out of 101,077
    • In genomics: 3,988 out of 6,266
  • Year to date:
    • Site-wide: 88,188 out of 101,077
  • Since beginning of last month:
    • Site-wide: 74,483 out of 101,077

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of mouse hematopoietic cells

genomics more details view paper
  • Downloaded 264 times
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    • Site-wide: 67,303 out of 101,077
    • In genomics: 5,027 out of 6,266
  • Year to date:
    • Site-wide: 90,274 out of 101,077
  • Since beginning of last month:
    • Site-wide: 78,292 out of 101,077

ZNF410 uniquely activates the NuRD component CHD4 to silence fetal hemoglobin expression

molecular biology more details view paper
  • Downloaded 238 times
  • Download rankings, all-time:
    • Site-wide: 71,925 out of 101,077
    • In molecular biology: 2,416 out of 3,508
  • Year to date:
    • Site-wide: 23,147 out of 101,077
  • Since beginning of last month:
    • Site-wide: 2,144 out of 101,077

Effects of sheared chromatin length on ChIP-seq quality and sensitivity

genomics more details view paper
  • Downloaded 225 times
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    • Site-wide: 74,327 out of 101,077
    • In genomics: 5,315 out of 6,266
  • Year to date:
    • Site-wide: 25,016 out of 101,077
  • Since beginning of last month:
    • Site-wide: 2,050 out of 101,077

Detecting local changes in chromatin architecture with false discovery control

genomics more details view paper
  • Downloaded 85 times
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    • Site-wide: 95,470 out of 101,077
    • In genomics: 6,088 out of 6,266
  • Year to date:
    • Site-wide: 72,599 out of 101,077
  • Since beginning of last month:
    • Site-wide: 8,839 out of 101,077

S3V2-IDEAS: a package for normalizing, denoising and integrating epigenomic datasets across different cell types

bioinformatics more details view paper
  • Downloaded 35 times
  • Download rankings, all-time:
    • Site-wide: 99,777 out of 101,077
    • In bioinformatics: 9,188 out of 9,276
  • Year to date:
    • Site-wide: 99,688 out of 101,077
  • Since beginning of last month:
    • Site-wide: 26,785 out of 101,077

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