Author: Davide Risso

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Preprints

Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia

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ZINB-WaVE: A general and flexible method for signal extraction from single-cell RNA-seq data

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An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

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Performance Assessment and Selection of Normalization Procedures for Single-Cell RNA-seq

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Orchestrating Single-Cell Analysis with Bioconductor

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A multimodal cell census and atlas of the mammalian primary motor cortex

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Slingshot: Cell lineage and pseudotime inference for single-cell transcriptomics

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Complementary networks of cortical somatostatin interneurons enforce layer specific control

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Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data

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Cell-type, single-cell, and spatial signatures of brain-region specific splicing in postnatal development

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Improving replicability in single-cell RNA-Seq cell type discovery with Dune

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Observation weights to unlock bulk RNA-seq tools for zero inflation and single-cell applications

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clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets

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Shank3 Modulates Sleep and Expression of Circadian Transcription Factors

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mbkmeans: fast clustering for single cell data using mini-batch k-means

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The human-specific BOLA2 duplication modifies iron homeostasis and anemia predisposition in chromosome 16p11.2 autism patients

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Per-sample standardization and asymmetric winsorization lead to accurate clustering of RNA-seq expression profiles

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