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Author: Koen Van den Berge

Rankings

  • All-time downloads: 49,552 (rank: 2,655 )
  • Categories:
    • bioinformatics: 8,633 (rank: 933 )
    • molecular biology: 230 (rank: 20,084 (tie) )
    • neuroscience: 40,689 (rank: 53 (tie) )

Downloads per author, site-wide

Preprints

Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia

neuroscience more details view paper
  • Downloaded 32,616 times
  • Download rankings, all-time:
    • Site-wide: 185
    • In neuroscience: 5
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: None

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

neuroscience more details view paper
  • Downloaded 4,808 times
  • Download rankings, all-time:
    • Site-wide: 1,953
    • In neuroscience: 112
  • Year to date:
    • Site-wide: 1,283
  • Since beginning of last month:
    • Site-wide: 1,283

A multimodal cell census and atlas of the mammalian primary motor cortex

neuroscience more details view paper
  • Downloaded 3,265 times
  • Download rankings, all-time:
    • Site-wide: 3,424
    • In neuroscience: 279
  • Year to date:
    • Site-wide: 1,353
  • Since beginning of last month:
    • Site-wide: 1,353

Trajectory-based differential expression analysis for single-cell sequencing data

bioinformatics more details view paper
  • Downloaded 3,256 times
  • Download rankings, all-time:
    • Site-wide: 3,440
    • In bioinformatics: 359
  • Year to date:
    • Site-wide: 9,147
  • Since beginning of last month:
    • Site-wide: 9,147

zingeR: unlocking RNA-seq tools for zero-inflation and single cell applications

bioinformatics more details view paper
  • Downloaded 2,007 times
  • Download rankings, all-time:
    • Site-wide: 6,876
    • In bioinformatics: 836
  • Year to date:
    • Site-wide: 49,787
  • Since beginning of last month:
    • Site-wide: 49,787

Improving replicability in single-cell RNA-Seq cell type discovery with Dune

bioinformatics more details view paper
  • Downloaded 1,139 times
  • Download rankings, all-time:
    • Site-wide: 16,152
    • In bioinformatics: 1,985
  • Year to date:
    • Site-wide: 11,540
  • Since beginning of last month:
    • Site-wide: 11,540

Observation weights to unlock bulk RNA-seq tools for zero inflation and single-cell applications

bioinformatics more details view paper
  • Downloaded 937 times
  • Download rankings, all-time:
    • Site-wide: 21,505
    • In bioinformatics: 2,579
  • Year to date:
    • Site-wide: 84,319
  • Since beginning of last month:
    • Site-wide: 84,319

A general and powerful stage-wise testing procedure for differential expression and differential transcript usage

bioinformatics more details view paper
  • Downloaded 691 times
  • Download rankings, all-time:
    • Site-wide: 32,960
    • In bioinformatics: 3,744
  • Year to date:
    • Site-wide: 101,741
  • Since beginning of last month:
    • Site-wide: 101,741

satuRn: Scalable Analysis of differential Transcript Usage for bulk and single-cell RNA-sequencing applications

bioinformatics more details view paper
  • Downloaded 390 times
  • Download rankings, all-time:
    • Site-wide: 64,427
    • In bioinformatics: 6,282
  • Year to date:
    • Site-wide: 1,657
  • Since beginning of last month:
    • Site-wide: 1,657

Mating type specific transcriptomic response to sex inducing pheromone in the pennate diatom Seminavis robusta

molecular biology more details view paper
  • Downloaded 230 times
  • Download rankings, all-time:
    • Site-wide: 94,994
    • In molecular biology: 2,853
  • Year to date:
    • Site-wide: 103,847
  • Since beginning of last month:
    • Site-wide: 103,847

Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effects

bioinformatics more details view paper
  • Downloaded 213 times
  • Download rankings, all-time:
    • Site-wide: 98,813
    • In bioinformatics: 8,515
  • Year to date:
    • Site-wide: 3,988
  • Since beginning of last month:
    • Site-wide: 3,988

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