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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,354 bioRxiv papers from 296,559 authors.

Author: Christoph Ziegenhain

Rankings

  • All-time downloads: 48,059 (rank: 309 out of 296,579)
  • Categories:
    • bioinformatics: 10,182 (rank: 306 (tie) out of 25,875)
    • developmental biology: 1,236 (rank: 1,110 (tie) out of 11,217)
    • genomics: 36,003 (rank: 151 out of 33,723)
    • microbiology: 638 (rank: 6,843 (tie) out of 30,649)

Downloads per author, site-wide

Preprints

Comparative analysis of single-cell RNA sequencing methods

genomics more details view paper
  • Downloaded 16,105 times
  • Download rankings, all-time:
    • Site-wide: 41 out of 67,351
    • In genomics: 10 out of 4,574
  • Year to date:
    • Site-wide: 1,022 out of 67,351
  • Since beginning of last month:
    • Site-wide: 2,388 out of 67,351

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

genomics more details view paper
  • Downloaded 8,535 times
  • Download rankings, all-time:
    • Site-wide: 162 out of 67,351
    • In genomics: 49 out of 4,574
  • Year to date:
    • Site-wide: 34 out of 67,351
  • Since beginning of last month:
    • Site-wide: 156 out of 67,351

A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines

bioinformatics more details view paper
  • Downloaded 4,497 times
  • Download rankings, all-time:
    • Site-wide: 541 out of 67,351
    • In bioinformatics: 108 out of 6,638
  • Year to date:
    • Site-wide: 115 out of 67,351
  • Since beginning of last month:
    • Site-wide: 1,422 out of 67,351

mcSCRB-seq: sensitive and powerful single-cell RNA sequencing

genomics more details view paper
  • Downloaded 4,045 times
  • Download rankings, all-time:
    • Site-wide: 669 out of 67,351
    • In genomics: 174 out of 4,574
  • Year to date:
    • Site-wide: 2,031 out of 67,351
  • Since beginning of last month:
    • Site-wide: 4,215 out of 67,351

Single-cell RNA counting at allele- and isoform-resolution using Smart-seq3

genomics more details view paper
  • Downloaded 3,812 times
  • Download rankings, all-time:
    • Site-wide: 751 out of 67,351
    • In genomics: 190 out of 4,574
  • Year to date:
    • Site-wide: 152 out of 67,351
  • Since beginning of last month:
    • Site-wide: 37 out of 67,351

powsimR: Power analysis for bulk and single cell RNA-seq experiments

bioinformatics more details view paper
  • Downloaded 3,093 times
  • Download rankings, all-time:
    • Site-wide: 1,122 out of 67,351
    • In bioinformatics: 226 out of 6,638
  • Year to date:
    • Site-wide: 5,900 out of 67,351
  • Since beginning of last month:
    • Site-wide: 22,356 out of 67,351

The impact of amplification on differential expression analyses by RNA-seq

genomics more details view paper
  • Downloaded 2,713 times
  • Download rankings, all-time:
    • Site-wide: 1,416 out of 67,351
    • In genomics: 320 out of 4,574
  • Year to date:
    • Site-wide: 20,139 out of 67,351
  • Since beginning of last month:
    • Site-wide: 19,541 out of 67,351

zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs

bioinformatics more details view paper
  • Downloaded 2,592 times
  • Download rankings, all-time:
    • Site-wide: 1,531 out of 67,351
    • In bioinformatics: 301 out of 6,638
  • Year to date:
    • Site-wide: 9,068 out of 67,351
  • Since beginning of last month:
    • Site-wide: 32,087 out of 67,351

TET1 drives global DNA demethylation via DPPA3-mediated inhibition of maintenance methylation

developmental biology more details view paper
  • Downloaded 1,236 times
  • Download rankings, all-time:
    • Site-wide: 5,478 out of 67,351
    • In developmental biology: 110 out of 2,001
  • Year to date:
    • Site-wide: 5,656 out of 67,351
  • Since beginning of last month:
    • Site-wide: 12,300 out of 67,351

Strategies for quantitative RNA-seq analyses among closely related species

genomics more details view paper
  • Downloaded 793 times
  • Download rankings, all-time:
    • Site-wide: 11,210 out of 67,351
    • In genomics: 1,604 out of 4,574
  • Year to date:
    • Site-wide: 6,411 out of 67,351
  • Since beginning of last month:
    • Site-wide: 29,178 out of 67,351

Low spatial structure and selection against secreted virulence factors attenuates pathogenicity in Pseudomonas aeruginosa

microbiology more details view paper
  • Downloaded 638 times
  • Download rankings, all-time:
    • Site-wide: 15,291 out of 67,351
    • In microbiology: 759 out of 5,437
  • Year to date:
    • Site-wide: 28,687 out of 67,351
  • Since beginning of last month:
    • Site-wide: 49,347 out of 67,351

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