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Author: Avanti Shrikumar

Rankings

  • All-time downloads: 72,835 (rank: 519 out of 394,911)
  • Categories:
    • bioinformatics: 64,671 (rank: 16 out of 33,523)
    • genomics: 8,164 (rank: 1,959 out of 41,981)

Downloads per author, site-wide

Preprints

Opportunities And Obstacles For Deep Learning In Biology And Medicine

bioinformatics more details view paper
  • Downloaded 53,479 times
  • Download rankings, all-time:
    • Site-wide: 21 out of 92,466
    • In bioinformatics: 3 out of 8,669
  • Year to date:
    • Site-wide: 616 out of 92,466
  • Since beginning of last month:
    • Site-wide: 531 out of 92,466

Base-resolution models of transcription factor binding reveal soft motif syntax

genomics more details view paper
  • Downloaded 6,340 times
  • Download rankings, all-time:
    • Site-wide: 520 out of 92,466
    • In genomics: 108 out of 5,833
  • Year to date:
    • Site-wide: 307 out of 92,466
  • Since beginning of last month:
    • Site-wide: 232 out of 92,466

Kipoi: accelerating the community exchange and reuse of predictive models for genomics

bioinformatics more details view paper
  • Downloaded 3,505 times
  • Download rankings, all-time:
    • Site-wide: 1,460 out of 92,466
    • In bioinformatics: 252 out of 8,669
  • Year to date:
    • Site-wide: 3,830 out of 92,466
  • Since beginning of last month:
    • Site-wide: 5,814 out of 92,466

Reverse-complement parameter sharing improves deep learning models for genomics

bioinformatics more details view paper
  • Downloaded 3,363 times
  • Download rankings, all-time:
    • Site-wide: 1,559 out of 92,466
    • In bioinformatics: 273 out of 8,669
  • Year to date:
    • Site-wide: 7,927 out of 92,466
  • Since beginning of last month:
    • Site-wide: 8,564 out of 92,466

Separable Fully Connected Layers Improve Deep Learning Models For Genomics

bioinformatics more details view paper
  • Downloaded 3,010 times
  • Download rankings, all-time:
    • Site-wide: 1,928 out of 92,466
    • In bioinformatics: 340 out of 8,669
  • Year to date:
    • Site-wide: 21,279 out of 92,466
  • Since beginning of last month:
    • Site-wide: 32,932 out of 92,466

Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

genomics more details view paper
  • Downloaded 1,824 times
  • Download rankings, all-time:
    • Site-wide: 4,409 out of 92,466
    • In genomics: 745 out of 5,833
  • Year to date:
    • Site-wide: 31,515 out of 92,466
  • Since beginning of last month:
    • Site-wide: 35,266 out of 92,466

Gkmexplain: Fast and Accurate Interpretation of Nonlinear Gapped k-mer Support Vector Machines Using Integrated Gradients

bioinformatics more details view paper
  • Downloaded 779 times
  • Download rankings, all-time:
    • Site-wide: 17,616 out of 92,466
    • In bioinformatics: 2,646 out of 8,669
  • Year to date:
    • Site-wide: 43,911 out of 92,466
  • Since beginning of last month:
    • Site-wide: 48,336 out of 92,466

Fourier-transform-based attribution priors improve the interpretability and stability of deep learning models for genomics

bioinformatics more details view paper
  • Downloaded 535 times
  • Download rankings, all-time:
    • Site-wide: 29,813 out of 92,466
    • In bioinformatics: 3,924 out of 8,669
  • Year to date:
    • Site-wide: 4,310 out of 92,466
  • Since beginning of last month:
    • Site-wide: 1,991 out of 92,466

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