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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,410 bioRxiv papers from 307,445 authors.

Author: Bonnie Berger

Rankings

  • All-time downloads: 39,692 (rank: 413 out of 307,143)
  • Categories:
    • bioinformatics: 13,030 (rank: 218 out of 26,783)
    • developmental biology: 686 (rank: 2,689 (tie) out of 11,762)
    • genetics: 25,976 (rank: 176 out of 30,487)

Downloads per author, site-wide

Preprints

A randomized parallel algorithm for efficiently finding near-optimal universal hitting sets

bioinformatics more details view paper

No bioRxiv download data for this paper yet.

Ancient human genomes suggest three ancestral populations for present-day Europeans

genetics more details view paper
  • Downloaded 18,451 times
  • Download rankings, all-time:
    • Site-wide: 37 out of 70,340
    • In genetics: 4 out of 3,900
  • Year to date:
    • Site-wide: 6,460 out of 70,340
  • Since beginning of last month:
    • Site-wide: 3,081 out of 70,340

Panoramic stitching of heterogeneous single-cell transcriptomic data

bioinformatics more details view paper
  • Downloaded 3,621 times
  • Download rankings, all-time:
    • Site-wide: 868 out of 70,340
    • In bioinformatics: 169 out of 6,889
  • Year to date:
    • Site-wide: 10,991 out of 70,340
  • Since beginning of last month:
    • Site-wide: 11,069 out of 70,340

Reconstructing Austronesian population history in Island Southeast Asia

genetics more details view paper
  • Downloaded 2,998 times
  • Download rankings, all-time:
    • Site-wide: 1,247 out of 70,340
    • In genetics: 113 out of 3,900
  • Year to date:
    • Site-wide: 3,424 out of 70,340
  • Since beginning of last month:
    • Site-wide: 2,051 out of 70,340

Efficient Bayesian mixed model analysis increases association power in large cohorts

genetics more details view paper
  • Downloaded 2,135 times
  • Download rankings, all-time:
    • Site-wide: 2,296 out of 70,340
    • In genetics: 210 out of 3,900
  • Year to date:
    • Site-wide: 44,611 out of 70,340
  • Since beginning of last month:
    • Site-wide: 53,327 out of 70,340

Geometric Sketching Compactly Summarizes the Single-Cell Transcriptomic Landscape

bioinformatics more details view paper
  • Downloaded 1,822 times
  • Download rankings, all-time:
    • Site-wide: 3,000 out of 70,340
    • In bioinformatics: 599 out of 6,889
  • Year to date:
    • Site-wide: 10,468 out of 70,340
  • Since beginning of last month:
    • Site-wide: 10,050 out of 70,340

Calibrating the Human Mutation Rate via Ancestral Recombination Density in Diploid Genomes

genetics more details view paper
  • Downloaded 1,490 times
  • Download rankings, all-time:
    • Site-wide: 4,222 out of 70,340
    • In genetics: 357 out of 3,900
  • Year to date:
    • Site-wide: 56,146 out of 70,340
  • Since beginning of last month:
    • Site-wide: 50,905 out of 70,340

Metagenomic binning through low density hashing

bioinformatics more details view paper
  • Downloaded 1,289 times
  • Download rankings, all-time:
    • Site-wide: 5,375 out of 70,340
    • In bioinformatics: 1,028 out of 6,889
  • Year to date:
    • Site-wide: 26,998 out of 70,340
  • Since beginning of last month:
    • Site-wide: 39,818 out of 70,340

Latent variable model for aligning barcoded short-reads improves downstream analyses

bioinformatics more details view paper
  • Downloaded 1,198 times
  • Download rankings, all-time:
    • Site-wide: 6,099 out of 70,340
    • In bioinformatics: 1,149 out of 6,889
  • Year to date:
    • Site-wide: 17,589 out of 70,340
  • Since beginning of last month:
    • Site-wide: 18,645 out of 70,340

Coexpression uncovers a unified single-cell transcriptomic landscape

bioinformatics more details view paper
  • Downloaded 1,127 times
  • Download rankings, all-time:
    • Site-wide: 6,763 out of 70,340
    • In bioinformatics: 1,240 out of 6,889
  • Year to date:
    • Site-wide: 1,612 out of 70,340
  • Since beginning of last month:
    • Site-wide: 1,862 out of 70,340

Neural Data Visualization for Scalable and Generalizable Single Cell Analysis

bioinformatics more details view paper
  • Downloaded 1,035 times
  • Download rankings, all-time:
    • Site-wide: 7,751 out of 70,340
    • In bioinformatics: 1,374 out of 6,889
  • Year to date:
    • Site-wide: 27,267 out of 70,340
  • Since beginning of last month:
    • Site-wide: 44,984 out of 70,340

Two variance component model improves genetic prediction in family data sets

genetics more details view paper
  • Downloaded 902 times
  • Download rankings, all-time:
    • Site-wide: 9,685 out of 70,340
    • In genetics: 710 out of 3,900
  • Year to date:
    • Site-wide: 39,079 out of 70,340
  • Since beginning of last month:
    • Site-wide: 41,263 out of 70,340

Topaz-Denoise: general deep denoising models for cryoEM

bioinformatics more details view paper
  • Downloaded 767 times
  • Download rankings, all-time:
    • Site-wide: 12,437 out of 70,340
    • In bioinformatics: 2,042 out of 6,889
  • Year to date:
    • Site-wide: 4,010 out of 70,340
  • Since beginning of last month:
    • Site-wide: 560 out of 70,340

C. elegans exhibits coordinated oscillation in gene activation in single-cell developmental data

developmental biology more details view paper
  • Downloaded 686 times
  • Download rankings, all-time:
    • Site-wide: 14,601 out of 70,340
    • In developmental biology: 335 out of 2,103
  • Year to date:
    • Site-wide: 17,169 out of 70,340
  • Since beginning of last month:
    • Site-wide: 47,069 out of 70,340

Carnelian: alignment-free functional binning and abundance estimation of metagenomic reads

bioinformatics more details view paper
  • Downloaded 665 times
  • Download rankings, all-time:
    • Site-wide: 15,295 out of 70,340
    • In bioinformatics: 2,395 out of 6,889
  • Year to date:
    • Site-wide: 62,129 out of 70,340
  • Since beginning of last month:
    • Site-wide: 27,355 out of 70,340

Fast genotyping of known SNPs through approximate k-mer matching

bioinformatics more details view paper
  • Downloaded 627 times
  • Download rankings, all-time:
    • Site-wide: 16,659 out of 70,340
    • In bioinformatics: 2,561 out of 6,889
  • Year to date:
    • Site-wide: 48,821 out of 70,340
  • Since beginning of last month:
    • Site-wide: 52,747 out of 70,340

Sequence biases in CLIP experimental data are incorporated in protein RNA-binding models

bioinformatics more details view paper
  • Downloaded 332 times
  • Download rankings, all-time:
    • Site-wide: 35,348 out of 70,340
    • In bioinformatics: 4,382 out of 6,889
  • Year to date:
    • Site-wide: 60,691 out of 70,340
  • Since beginning of last month:
    • Site-wide: 65,992 out of 70,340

Schema: A general framework for integrating heterogeneous single-cell modalities

bioinformatics more details view paper
  • Downloaded 277 times
  • Download rankings, all-time:
    • Site-wide: 41,242 out of 70,340
    • In bioinformatics: 4,864 out of 6,889
  • Year to date:
    • Site-wide: 3,253 out of 70,340
  • Since beginning of last month:
    • Site-wide: 8,302 out of 70,340

Hopper: A Mathematically Optimal Algorithm for Sketching Biological Data

bioinformatics more details view paper
  • Downloaded 270 times
  • Download rankings, all-time:
    • Site-wide: 42,020 out of 70,340
    • In bioinformatics: 4,932 out of 6,889
  • Year to date:
    • Site-wide: 6,550 out of 70,340
  • Since beginning of last month:
    • Site-wide: 11,356 out of 70,340

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