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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,745 bioRxiv papers from 278,406 authors.

Author: Steven L Salzberg

  • Most recently observed institution: Johns Hopkins University

Rankings

  • All-time downloads: 31,643 (rank: 532 out of 278,406)
  • Categories:
    • bioinformatics: 22,595 (rank: 70 out of 24,403)
    • genomics: 8,371 (rank: 1,233 out of 31,945)
    • microbiology: 322 (rank: 13,173 (tie) out of 28,540)
    • plant biology: 355 (rank: 4,936 (tie) out of 9,689)

Downloads per author, site-wide

Preprints

Flexible analysis of transcriptome assemblies with Ballgown

bioinformatics more details view paper
  • Downloaded 13,360 times
  • Download rankings, all-time:
    • Site-wide: 59 out of 62,745
    • In bioinformatics: 9 out of 6,251
  • Year to date:
    • Site-wide: 1,897 out of 62,745
  • Since beginning of last month:
    • Site-wide: 3,198 out of 62,745

Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the mega-reads algorithm

bioinformatics more details view paper
  • Downloaded 6,160 times
  • Download rankings, all-time:
    • Site-wide: 274 out of 62,745
    • In bioinformatics: 47 out of 6,251
  • Year to date:
    • Site-wide: 4,072 out of 62,745
  • Since beginning of last month:
    • Site-wide: 6,222 out of 62,745

Thousands of large-scale RNA sequencing experiments yield a comprehensive new human gene list and reveal extensive transcriptional noise

genomics more details view paper
  • Downloaded 6,010 times
  • Download rankings, all-time:
    • Site-wide: 293 out of 62,745
    • In genomics: 81 out of 4,316
  • Year to date:
    • Site-wide: 1,722 out of 62,745
  • Since beginning of last month:
    • Site-wide: 4,041 out of 62,745

Bracken: Estimating species abundance in metagenomics data

bioinformatics more details view paper
  • Downloaded 1,868 times
  • Download rankings, all-time:
    • Site-wide: 2,511 out of 62,745
    • In bioinformatics: 509 out of 6,251
  • Year to date:
    • Site-wide: 23,593 out of 62,745
  • Since beginning of last month:
    • Site-wide: 24,089 out of 62,745

Next-generation sequencing in neuropathological diagnosis of infections of the nervous system

genomics more details view paper
  • Downloaded 1,459 times
  • Download rankings, all-time:
    • Site-wide: 3,816 out of 62,745
    • In genomics: 707 out of 4,316
  • Year to date:
    • Site-wide: 54,421 out of 62,745
  • Since beginning of last month:
    • Site-wide: 59,034 out of 62,745

Faster sequence alignment through GPU-accelerated restriction of the seed-and-extend search space

bioinformatics more details view paper
  • Downloaded 1,207 times
  • Download rankings, all-time:
    • Site-wide: 5,190 out of 62,745
    • In bioinformatics: 1,005 out of 6,251
  • Year to date:
    • Site-wide: 41,522 out of 62,745
  • Since beginning of last month:
    • Site-wide: 28,421 out of 62,745

Transcriptome assembly from long-read RNA-seq alignments with StringTie2

genomics more details view paper
  • Downloaded 902 times
  • Download rankings, all-time:
    • Site-wide: 8,368 out of 62,745
    • In genomics: 1,292 out of 4,316
  • Year to date:
    • Site-wide: 1,771 out of 62,745
  • Since beginning of last month:
    • Site-wide: 1,683 out of 62,745

Genome assembly and characterization of a complex zfBED-NLR gene-containing disease resistance locus in Carolina Gold Select rice with Nanopore sequencing

plant biology more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 28,041 out of 62,745
    • In plant biology: 768 out of 1,761
  • Year to date:
    • Site-wide: 8,633 out of 62,745
  • Since beginning of last month:
    • Site-wide: 5,026 out of 62,745

First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (formerly Scedosporium prolificans)

microbiology more details view paper
  • Downloaded 322 times
  • Download rankings, all-time:
    • Site-wide: 30,859 out of 62,745
    • In microbiology: 1,916 out of 5,025
  • Year to date:
    • Site-wide: 61,071 out of 62,745
  • Since beginning of last month:
    • Site-wide: 51,108 out of 62,745

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