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Author: Peter J Park

Rankings

  • All-time downloads: 32,351 (rank: 4,698 )
  • Categories:
    • bioinformatics: 9,891 (rank: 759 )
    • cancer biology: 2,093 (rank: 2,503 (tie) )
    • developmental biology: 357 (rank: 12,252 (tie) )
    • evolutionary biology: 380 (rank: 16,149 (tie) )
    • genetic and genomic medicine: 1,086 (rank: 1,695 (tie) )
    • genetics: 595 (rank: 22,708 (tie) )
    • genomics: 14,795 (rank: 995 )
    • infectious diseases: 452 (rank: 30,151 (tie) )
    • molecular biology: 374 (rank: 15,804 (tie) )
    • neuroscience: 2,328 (rank: 9,111 (tie) )

Downloads per author, site-wide

Preprints

Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing

genomics more details view paper
  • Downloaded 4,740 times
  • Download rankings, all-time:
    • Site-wide: 2,150
    • In genomics: 227
  • Year to date:
    • Site-wide: 33,468
  • Since beginning of last month:
    • Site-wide: 27,371

Pan-cancer analysis of whole genomes reveals driver rearrangements promoted by LINE-1 retrotransposition in human tumours

genomics more details view paper
  • Downloaded 3,590 times
  • Download rankings, all-time:
    • Site-wide: 3,201
    • In genomics: 362
  • Year to date:
    • Site-wide: 33,520
  • Since beginning of last month:
    • Site-wide: 41,552

The 4D Nucleome Project

genomics more details view paper
  • Downloaded 3,149 times
  • Download rankings, all-time:
    • Site-wide: 3,870
    • In genomics: 436
  • Year to date:
    • Site-wide: 76,190
  • Since beginning of last month:
    • Site-wide: 67,500

A user’s guide to the online resources for data exploration, visualization, and discovery for the Pan-Cancer Analysis of Whole Genomes project (PCAWG)

bioinformatics more details view paper
  • Downloaded 2,545 times
  • Download rankings, all-time:
    • Site-wide: 5,233
    • In bioinformatics: 573
  • Year to date:
    • Site-wide: 18,702
  • Since beginning of last month:
    • Site-wide: 17,425

HiGlass: Web-based Visual Exploration and Analysis of Genome Interaction Maps

bioinformatics more details view paper
  • Downloaded 2,536 times
  • Download rankings, all-time:
    • Site-wide: 5,260
    • In bioinformatics: 577
  • Year to date:
    • Site-wide: 80,316
  • Since beginning of last month:
    • Site-wide: 98,159

A molecular portrait of microsatellite instability across multiple cancers

cancer biology more details view paper
  • Downloaded 2,093 times
  • Download rankings, all-time:
    • Site-wide: 6,987
    • In cancer biology: 111
  • Year to date:
    • Site-wide: 49,522
  • Since beginning of last month:
    • Site-wide: 61,805

Linked-read analysis identifies mutations in single-cell DNA sequencing data

bioinformatics more details view paper
  • Downloaded 1,642 times
  • Download rankings, all-time:
    • Site-wide: 10,052
    • In bioinformatics: 1,212
  • Year to date:
    • Site-wide: 101,169
  • Since beginning of last month:
    • Site-wide: 92,499

Genomic footprints of activated telomere maintenance mechanisms in cancer

genomics more details view paper
  • Downloaded 1,464 times
  • Download rankings, all-time:
    • Site-wide: 11,861
    • In genomics: 1,290
  • Year to date:
    • Site-wide: 94,047
  • Since beginning of last month:
    • Site-wide: 81,314

The Landscape of Mutational Mosaicism in Autistic and Normal Human Cerebral Cortex

neuroscience more details view paper
  • Downloaded 1,401 times
  • Download rankings, all-time:
    • Site-wide: 12,689
    • In neuroscience: 1,456
  • Year to date:
    • Site-wide: 20,590
  • Since beginning of last month:
    • Site-wide: 25,429

Aging and neurodegeneration are associated with increased mutations in single human neurons

genomics more details view paper
  • Downloaded 1,292 times
  • Download rankings, all-time:
    • Site-wide: 14,389
    • In genomics: 1,519
  • Year to date:
    • Site-wide: 75,460
  • Since beginning of last month:
    • Site-wide: 89,421

Tibanna: software for scalable execution of portable pipelines on the cloud

bioinformatics more details view paper
  • Downloaded 1,115 times
  • Download rankings, all-time:
    • Site-wide: 17,892
    • In bioinformatics: 2,147
  • Year to date:
    • Site-wide: 29,899
  • Since beginning of last month:
    • Site-wide: 28,517

Large mosaic copy number variations confer autism risk

genetic and genomic medicine more details view paper
  • Downloaded 1,086 times
  • Download rankings, all-time:
    • Site-wide: 18,639
    • In genetic and genomic medicine: 61
  • Year to date:
    • Site-wide: 19,165
  • Since beginning of last month:
    • Site-wide: 32,433

HiNT: a computational method for detecting copy number variations and translocations from Hi-C data

bioinformatics more details view paper
  • Downloaded 973 times
  • Download rankings, all-time:
    • Site-wide: 21,794
    • In bioinformatics: 2,580
  • Year to date:
    • Site-wide: 91,487
  • Since beginning of last month:
    • Site-wide: 122,000

Parallel RNA and DNA analysis after Deep-sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain

neuroscience more details view paper
  • Downloaded 927 times
  • Download rankings, all-time:
    • Site-wide: 23,434
    • In neuroscience: 3,050
  • Year to date:
    • Site-wide: 89,463
  • Since beginning of last month:
    • Site-wide: 85,486

Variation across population subgroups of COVID-19 antibody testing performance

infectious diseases more details view paper
  • Downloaded 452 times
  • Download rankings, all-time:
    • Site-wide: 59,114
    • In infectious diseases: 2,877
  • Year to date:
    • Site-wide: 48,681
  • Since beginning of last month:
    • Site-wide: 43,286

Comprehensive identification of somatic nucleotide variants in human brain tissue

genomics more details view paper
  • Downloaded 394 times
  • Download rankings, all-time:
    • Site-wide: 67,916
    • In genomics: 4,768
  • Year to date:
    • Site-wide: 25,538
  • Since beginning of last month:
    • Site-wide: 36,318

Predicting future from past: The genomic basis of recurrent and rapid stickleback evolution

evolutionary biology more details view paper
  • Downloaded 380 times
  • Download rankings, all-time:
    • Site-wide: 70,142
    • In evolutionary biology: 3,851
  • Year to date:
    • Site-wide: 28,283
  • Since beginning of last month:
    • Site-wide: 29,919

PaSD-qc: Quality control for single cell whole-genome sequencing data using power spectral density estimation

bioinformatics more details view paper
  • Downloaded 378 times
  • Download rankings, all-time:
    • Site-wide: 70,470
    • In bioinformatics: 6,716
  • Year to date:
    • Site-wide: 112,233
  • Since beginning of last month:
    • Site-wide: 118,043

Epigenetic transcriptional reprogramming by WT1 mediates a repair response during podocyte injury

molecular biology more details view paper
  • Downloaded 374 times
  • Download rankings, all-time:
    • Site-wide: 71,184
    • In molecular biology: 2,090
  • Year to date:
    • Site-wide: 62,503
  • Since beginning of last month:
    • Site-wide: 84,805

HiTea: a computational pipeline to identify non-reference transposable element insertions in Hi-C data

bioinformatics more details view paper
  • Downloaded 365 times
  • Download rankings, all-time:
    • Site-wide: 72,758
    • In bioinformatics: 6,859
  • Year to date:
    • Site-wide: 64,499
  • Since beginning of last month:
    • Site-wide: 52,280

Otx2 and Oc1 directly regulate the transcriptional program of cone photoreceptor development

developmental biology more details view paper
  • Downloaded 357 times
  • Download rankings, all-time:
    • Site-wide: 74,073
    • In developmental biology: 1,926
  • Year to date:
    • Site-wide: 33,374
  • Since beginning of last month:
    • Site-wide: 36,871

Single cell gene fusion detection by scFusion

bioinformatics more details view paper
  • Downloaded 337 times
  • Download rankings, all-time:
    • Site-wide: 77,800
    • In bioinformatics: 7,184
  • Year to date:
    • Site-wide: 10,340
  • Since beginning of last month:
    • Site-wide: 9,926

Essential histone chaperones collaborate to regulate transcription and chromatin integrity

genetics more details view paper
  • Downloaded 302 times
  • Download rankings, all-time:
    • Site-wide: 84,875
    • In genetics: 3,846
  • Year to date:
    • Site-wide: 35,336
  • Since beginning of last month:
    • Site-wide: 36,765

Whole-genome analysis of de novo and polymorphic retrotransposon insertions in Autism Spectrum Disorder

genetics more details view paper
  • Downloaded 293 times
  • Download rankings, all-time:
    • Site-wide: 86,864
    • In genetics: 3,924
  • Year to date:
    • Site-wide: 6,473
  • Since beginning of last month:
    • Site-wide: 24,950

The conserved elongation factor Spn1 is required for normal transcription, histone modifications, and splicing in Saccharomyces cerevisiae

genomics more details view paper
  • Downloaded 166 times
  • Download rankings, all-time:
    • Site-wide: 114,664
    • In genomics: 6,412
  • Year to date:
    • Site-wide: 105,386
  • Since beginning of last month:
    • Site-wide: 83,369

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