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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,472 bioRxiv papers from 277,337 authors.

Author: Ben Langmead

  • Most recently observed institution: Johns Hopkins University

Rankings

  • All-time downloads: 31,972 (rank: 526 out of 277,419)
  • Categories:
    • bioinformatics: 25,597 (rank: 63 out of 24,391)
    • genomics: 5,782 (rank: 1,978 out of 31,917)
    • neuroscience: 593 (rank: 16,117 (tie) out of 45,818)

Downloads per author, site-wide

Preprints

Flexible analysis of transcriptome assemblies with Ballgown

bioinformatics more details view paper
  • Downloaded 13,332 times
  • Download rankings, all-time:
    • Site-wide: 59 out of 62,482
    • In bioinformatics: 9 out of 6,231
  • Year to date:
    • Site-wide: 1,990 out of 62,482
  • Since beginning of last month:
    • Site-wide: 4,830 out of 62,482

recount: A large-scale resource of analysis-ready RNA-seq expression data

genomics more details view paper
  • Downloaded 3,534 times
  • Download rankings, all-time:
    • Site-wide: 797 out of 62,482
    • In genomics: 206 out of 4,297
  • Year to date:
    • Site-wide: 7,227 out of 62,482
  • Since beginning of last month:
    • Site-wide: 5,332 out of 62,482

Rail-RNA: Scalable analysis of RNA-seq splicing and coverage

bioinformatics more details view paper
  • Downloaded 3,224 times
  • Download rankings, all-time:
    • Site-wide: 937 out of 62,482
    • In bioinformatics: 188 out of 6,231
  • Year to date:
    • Site-wide: 30,849 out of 62,482
  • Since beginning of last month:
    • Site-wide: 35,981 out of 62,482

Human splicing diversity across the Sequence Read Archive

genomics more details view paper
  • Downloaded 2,248 times
  • Download rankings, all-time:
    • Site-wide: 1,802 out of 62,482
    • In genomics: 400 out of 4,297
  • Year to date:
    • Site-wide: 40,233 out of 62,482
  • Since beginning of last month:
    • Site-wide: 23,582 out of 62,482

Flexible expressed region analysis for RNA-seq with derfinder

bioinformatics more details view paper
  • Downloaded 2,173 times
  • Download rankings, all-time:
    • Site-wide: 1,921 out of 62,482
    • In bioinformatics: 393 out of 6,231
  • Year to date:
    • Site-wide: 37,457 out of 62,482
  • Since beginning of last month:
    • Site-wide: 55,865 out of 62,482

Polyester: simulating RNA-seq datasets with differential transcript expression

bioinformatics more details view paper
  • Downloaded 2,086 times
  • Download rankings, all-time:
    • Site-wide: 2,069 out of 62,482
    • In bioinformatics: 429 out of 6,231
  • Year to date:
    • Site-wide: 21,663 out of 62,482
  • Since beginning of last month:
    • Site-wide: 19,621 out of 62,482

Lighter: fast and memory-efficient error correction without counting

bioinformatics more details view paper
  • Downloaded 1,255 times
  • Download rankings, all-time:
    • Site-wide: 4,843 out of 62,482
    • In bioinformatics: 944 out of 6,231
  • Year to date:
    • Site-wide: 52,591 out of 62,482
  • Since beginning of last month:
    • Site-wide: 55,080 out of 62,482

Faster sequence alignment through GPU-accelerated restriction of the seed-and-extend search space

bioinformatics more details view paper
  • Downloaded 1,207 times
  • Download rankings, all-time:
    • Site-wide: 5,172 out of 62,482
    • In bioinformatics: 1,003 out of 6,231
  • Year to date:
    • Site-wide: 41,099 out of 62,482
  • Since beginning of last month:
    • Site-wide: 26,230 out of 62,482

FORGe: prioritizing variants for graph genomes

bioinformatics more details view paper
  • Downloaded 914 times
  • Download rankings, all-time:
    • Site-wide: 8,165 out of 62,482
    • In bioinformatics: 1,436 out of 6,231
  • Year to date:
    • Site-wide: 34,955 out of 62,482
  • Since beginning of last month:
    • Site-wide: 34,026 out of 62,482

Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce

bioinformatics more details view paper
  • Downloaded 899 times
  • Download rankings, all-time:
    • Site-wide: 8,381 out of 62,482
    • In bioinformatics: 1,475 out of 6,231
  • Year to date:
    • Site-wide: 45,854 out of 62,482
  • Since beginning of last month:
    • Site-wide: 37,668 out of 62,482

ASCOT identifies key regulators of neuronal subtype-specific splicing

neuroscience more details view paper
  • Downloaded 593 times
  • Download rankings, all-time:
    • Site-wide: 15,327 out of 62,482
    • In neuroscience: 2,532 out of 11,150
  • Year to date:
    • Site-wide: 5,228 out of 62,482
  • Since beginning of last month:
    • Site-wide: 17,550 out of 62,482

Efficient Construction of a Complete Index for Pan-Genomics Read Alignment

bioinformatics more details view paper
  • Downloaded 321 times
  • Download rankings, all-time:
    • Site-wide: 30,799 out of 62,482
    • In bioinformatics: 3,987 out of 6,231
  • Year to date:
    • Site-wide: 32,659 out of 62,482
  • Since beginning of last month:
    • Site-wide: 59,729 out of 62,482

Prefix-Free Parsing for Building Big BWTs

bioinformatics more details view paper
  • Downloaded 186 times
  • Download rankings, all-time:
    • Site-wide: 45,684 out of 62,482
    • In bioinformatics: 5,145 out of 6,231
  • Year to date:
    • Site-wide: 51,345 out of 62,482
  • Since beginning of last month:
    • Site-wide: 60,398 out of 62,482

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