Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 72,919 bioRxiv papers from 317,430 authors.

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Preprints

Semi-supervised segmentation and genome annotation

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Viral integration transforms chromatin to drive oncogenesis

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Opportunities And Obstacles For Deep Learning In Biology And Medicine

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  • In bioinformatics: 1 out of 7,121
• Year to date:
  • Site-wide: 815 out of 72,911
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Virtual ChIP-seq: Predicting transcription factor binding by learning from the transcriptome

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  • In bioinformatics: 103 out of 7,121
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A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types

• Downloaded 2,259 times
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  • In genomics: 458 out of 4,840
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Functional Annotation of Human Long Non-Coding RNAs via Molecular Phenotyping

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  • In genomics: 595 out of 4,840
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Semi-automated genome annotation using epigenomic data and Segway

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  • In bioinformatics: 617 out of 7,121
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  • Site-wide: 23,560 out of 72,911
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Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet

• Downloaded 1,755 times
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  • In bioinformatics: 657 out of 7,121
• Year to date:
  • Site-wide: 17,666 out of 72,911
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DNAmod: the DNA modification database

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  • In bioinformatics: 982 out of 7,121
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Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell type-specific expression

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  • In genomics: 957 out of 4,840
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  • Site-wide: 63,617 out of 72,911
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  • Site-wide: 63,617 out of 72,911

Umap and Bismap: quantifying genome and methylome mappability

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  • In genomics: 1,114 out of 4,840
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  • Site-wide: 19,087 out of 72,911
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BEHST: genomic set enrichment analysis enhanced through integration of chromatin long-range interactions

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  • In bioinformatics: 1,488 out of 7,121
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  • Site-wide: 17,556 out of 72,911
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  • Site-wide: 17,556 out of 72,911

Segway 2.0: Gaussian mixture models and minibatch training

• Downloaded 474 times
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  • In bioinformatics: 3,472 out of 7,121
• Year to date:
  • Site-wide: 56,283 out of 72,911
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  • Site-wide: 56,283 out of 72,911

Motif elucidation in ChIP-seq datasets with a knockout control

• Downloaded 318 times
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  • In bioinformatics: 4,661 out of 7,121
• Year to date:
  • Site-wide: 20,835 out of 72,911
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  • Site-wide: 20,835 out of 72,911