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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,198 bioRxiv papers from 276,129 authors.

Author: Michael M. Hoffman

Rankings

  • All-time downloads: 67,384 (rank: 170 out of 276,129)
  • Categories:
    • bioinformatics: 61,461 (rank: 6 out of 24,242)
    • genomics: 5,923 (rank: 1,956 (tie) out of 31,834)

Downloads per author, site-wide

Preprints

Opportunities And Obstacles For Deep Learning In Biology And Medicine

bioinformatics more details view paper
  • Downloaded 50,811 times
  • Download rankings, all-time:
    • Site-wide: 7 out of 62,198
    • In bioinformatics: 1 out of 6,209
  • Year to date:
    • Site-wide: 91 out of 62,198
  • Since beginning of last month:
    • Site-wide: 443 out of 62,198

Virtual ChIP-seq: Predicting transcription factor binding by learning from the transcriptome

bioinformatics more details view paper
  • Downloaded 4,442 times
  • Download rankings, all-time:
    • Site-wide: 498 out of 62,198
    • In bioinformatics: 102 out of 6,209
  • Year to date:
    • Site-wide: 451 out of 62,198
  • Since beginning of last month:
    • Site-wide: 45,708 out of 62,198

A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types

genomics more details view paper
  • Downloaded 2,184 times
  • Download rankings, all-time:
    • Site-wide: 1,871 out of 62,198
    • In genomics: 416 out of 4,277
  • Year to date:
    • Site-wide: 8,374 out of 62,198
  • Since beginning of last month:
    • Site-wide: 6,263 out of 62,198

Semi-automated genome annotation using epigenomic data and Segway

bioinformatics more details view paper
  • Downloaded 1,742 times
  • Download rankings, all-time:
    • Site-wide: 2,781 out of 62,198
    • In bioinformatics: 562 out of 6,209
  • Year to date:
    • Site-wide: 14,839 out of 62,198
  • Since beginning of last month:
    • Site-wide: 11,949 out of 62,198

Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet

bioinformatics more details view paper
  • Downloaded 1,676 times
  • Download rankings, all-time:
    • Site-wide: 2,978 out of 62,198
    • In bioinformatics: 606 out of 6,209
  • Year to date:
    • Site-wide: 14,078 out of 62,198
  • Since beginning of last month:
    • Site-wide: 18,625 out of 62,198

Functional Annotation of Human Long Non-Coding RNAs via Molecular Phenotyping

genomics more details view paper
  • Downloaded 1,429 times
  • Download rankings, all-time:
    • Site-wide: 3,873 out of 62,198
    • In genomics: 721 out of 4,277
  • Year to date:
    • Site-wide: 723 out of 62,198
  • Since beginning of last month:
    • Site-wide: 738 out of 62,198

DNAmod: the DNA modification database

bioinformatics more details view paper
  • Downloaded 1,299 times
  • Download rankings, all-time:
    • Site-wide: 4,529 out of 62,198
    • In bioinformatics: 894 out of 6,209
  • Year to date:
    • Site-wide: 16,006 out of 62,198
  • Since beginning of last month:
    • Site-wide: 22,379 out of 62,198

Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell type-specific expression

genomics more details view paper
  • Downloaded 1,240 times
  • Download rankings, all-time:
    • Site-wide: 4,878 out of 62,198
    • In genomics: 858 out of 4,277
  • Year to date:
    • Site-wide: 53,696 out of 62,198
  • Since beginning of last month:
    • Site-wide: 45,524 out of 62,198

Umap and Bismap: quantifying genome and methylome mappability

genomics more details view paper
  • Downloaded 1,070 times
  • Download rankings, all-time:
    • Site-wide: 6,256 out of 62,198
    • In genomics: 1,043 out of 4,277
  • Year to date:
    • Site-wide: 36,556 out of 62,198
  • Since beginning of last month:
    • Site-wide: 38,128 out of 62,198

BEHST: genomic set enrichment analysis enhanced through integration of chromatin long-range interactions

bioinformatics more details view paper
  • Downloaded 899 times
  • Download rankings, all-time:
    • Site-wide: 8,236 out of 62,198
    • In bioinformatics: 1,461 out of 6,209
  • Year to date:
    • Site-wide: 1,666 out of 62,198
  • Since beginning of last month:
    • Site-wide: None out of 62,198

Segway 2.0: Gaussian mixture models and minibatch training

bioinformatics more details view paper
  • Downloaded 447 times
  • Download rankings, all-time:
    • Site-wide: 21,543 out of 62,198
    • In bioinformatics: 3,112 out of 6,209
  • Year to date:
    • Site-wide: 56,712 out of 62,198
  • Since beginning of last month:
    • Site-wide: 44,531 out of 62,198

Motif elucidation in ChIP-seq datasets with a knockout control

bioinformatics more details view paper
  • Downloaded 145 times
  • Download rankings, all-time:
    • Site-wide: 50,500 out of 62,198
    • In bioinformatics: 5,511 out of 6,209
  • Year to date:
    • Site-wide: 27,595 out of 62,198
  • Since beginning of last month:
    • Site-wide: 3,010 out of 62,198

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