Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 63,016 bioRxiv papers from 279,490 authors.

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Preprints

Segmentation-free inference of cell-types from in situ transcriptomics data

No bioRxiv download data for this paper yet.

The evolutionary history of 2,658 cancers

• Downloaded 7,378 times
• Download rankings, all-time:
  • Site-wide: 189 out of 63,016
  • In cancer biology: 5 out of 2,072
• Year to date:
  • Site-wide: 506 out of 63,016
• Since beginning of last month:
  • Site-wide: 967 out of 63,016

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

• Downloaded 4,159 times
• Download rankings, all-time:
  • Site-wide: 581 out of 63,016
  • In genomics: 154 out of 4,328
• Year to date:
  • Site-wide: 1,218 out of 63,016
• Since beginning of last month:
  • Site-wide: 3,042 out of 63,016

Computational Pan-Genomics: Status, Promises and Challenges

• Downloaded 4,066 times
• Download rankings, all-time:
  • Site-wide: 612 out of 63,016
  • In genomics: 162 out of 4,328
• Year to date:
  • Site-wide: 9,542 out of 63,016
• Since beginning of last month:
  • Site-wide: 11,431 out of 63,016

Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types

• Downloaded 3,811 times
• Download rankings, all-time:
  • Site-wide: 692 out of 63,016
  • In cancer biology: 21 out of 2,072
• Year to date:
  • Site-wide: 1,078 out of 63,016
• Since beginning of last month:
  • Site-wide: 1,938 out of 63,016

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

• Downloaded 2,275 times
• Download rankings, all-time:
  • Site-wide: 1,768 out of 63,016
  • In genomics: 392 out of 4,328
• Year to date:
  • Site-wide: 49,166 out of 63,016
• Since beginning of last month:
  • Site-wide: 38,920 out of 63,016

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

• Downloaded 1,981 times
• Download rankings, all-time:
  • Site-wide: 2,283 out of 63,016
  • In genomics: 480 out of 4,328
• Year to date:
  • Site-wide: 45,413 out of 63,016
• Since beginning of last month:
  • Site-wide: 41,814 out of 63,016

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

• Downloaded 1,874 times
• Download rankings, all-time:
  • Site-wide: 2,503 out of 63,016
  • In genomics: 518 out of 4,328
• Year to date:
  • Site-wide: 6,208 out of 63,016
• Since beginning of last month:
  • Site-wide: 9,692 out of 63,016

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

• Downloaded 1,478 times
• Download rankings, all-time:
  • Site-wide: 3,733 out of 63,016
  • In genomics: 694 out of 4,328
• Year to date:
  • Site-wide: 3,991 out of 63,016
• Since beginning of last month:
  • Site-wide: 11,176 out of 63,016

Questioning unexpected CRISPR off-target mutations in vivo

• Downloaded 1,340 times
• Download rankings, all-time:
  • Site-wide: 4,385 out of 63,016
  • In genomics: 790 out of 4,328
• Year to date:
  • Site-wide: 40,310 out of 63,016
• Since beginning of last month:
  • Site-wide: 37,338 out of 63,016

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

• Downloaded 1,225 times
• Download rankings, all-time:
  • Site-wide: 5,069 out of 63,016
  • In genomics: 878 out of 4,328
• Year to date:
  • Site-wide: 15,779 out of 63,016
• Since beginning of last month:
  • Site-wide: 12,484 out of 63,016

Genomic footprints of activated telomere maintenance mechanisms in cancer

• Downloaded 1,132 times
• Download rankings, all-time:
  • Site-wide: 5,808 out of 63,016
  • In genomics: 974 out of 4,328
• Year to date:
  • Site-wide: 9,345 out of 63,016
• Since beginning of last month:
  • Site-wide: 9,952 out of 63,016

ACEseq - allele specific copy number estimation from whole genome sequencing

• Downloaded 958 times
• Download rankings, all-time:
  • Site-wide: 7,587 out of 63,016
  • In bioinformatics: 1,360 out of 6,269
• Year to date:
  • Site-wide: 16,041 out of 63,016
• Since beginning of last month:
  • Site-wide: 18,461 out of 63,016

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

• Downloaded 867 times
• Download rankings, all-time:
  • Site-wide: 8,907 out of 63,016
  • In genomics: 1,356 out of 4,328
• Year to date:
  • Site-wide: 26,819 out of 63,016
• Since beginning of last month:
  • Site-wide: 37,916 out of 63,016

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

• Downloaded 786 times
• Download rankings, all-time:
  • Site-wide: 10,337 out of 63,016
  • In cancer biology: 290 out of 2,072
• Year to date:
  • Site-wide: 46,540 out of 63,016
• Since beginning of last month:
  • Site-wide: 47,359 out of 63,016

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

• Downloaded 543 times
• Download rankings, all-time:
  • Site-wide: 17,353 out of 63,016
  • In bioinformatics: 2,633 out of 6,269
• Year to date:
  • Site-wide: 30,203 out of 63,016
• Since beginning of last month:
  • Site-wide: 43,065 out of 63,016

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

• Downloaded 247 times
• Download rankings, all-time:
  • Site-wide: 38,483 out of 63,016
  • In bioinformatics: 4,636 out of 6,269
• Year to date:
  • Site-wide: 39,595 out of 63,016
• Since beginning of last month:
  • Site-wide: 46,546 out of 63,016