Rxivist logo

Author: Eran Halperin

  • Most recently observed institution: Bioinformatics Interdepartmental Program

Rankings

  • All-time downloads: 22,778 (rank: 2,703 (tie) out of 427,317)
  • Categories:
    • bioinformatics: 10,324 (rank: 584 out of 36,203)
    • genetics: 5,493 (rank: 3,282 out of 38,051)
    • genomics: 2,253 (rank: 9,276 (tie) out of 44,673)
    • microbiology: 4,708 (rank: 2,007 out of 50,831)

Downloads per author, site-wide

Preprints

Statistical Considerations in the Design and Analysis of Longitudinal Microbiome Studies

microbiology more details view paper
  • Downloaded 3,235 times
  • Download rankings, all-time:
    • Site-wide: 1,882 out of 101,163
    • In microbiology: 177 out of 8,981
  • Year to date:
    • Site-wide: 3,611 out of 101,163
  • Since beginning of last month:
    • Site-wide: 6,545 out of 101,163

Recycler: an algorithm for detecting plasmids from de novo assembly graphs

genomics more details view paper
  • Downloaded 2,253 times
  • Download rankings, all-time:
    • Site-wide: 3,476 out of 101,163
    • In genomics: 619 out of 6,271
  • Year to date:
    • Site-wide: 37,572 out of 101,163
  • Since beginning of last month:
    • Site-wide: 52,295 out of 101,163

Accurate estimation of cell composition in bulk expression through robust integration of single-cell information

bioinformatics more details view paper
  • Downloaded 1,828 times
  • Download rankings, all-time:
    • Site-wide: 4,919 out of 101,163
    • In bioinformatics: 875 out of 9,286
  • Year to date:
    • Site-wide: 4,079 out of 101,163
  • Since beginning of last month:
    • Site-wide: 15,381 out of 101,163

Modeling the temporal dynamics of the gut microbial community in adults and infants

microbiology more details view paper
  • Downloaded 1,473 times
  • Download rankings, all-time:
    • Site-wide: 7,044 out of 101,163
    • In microbiology: 467 out of 8,981
  • Year to date:
    • Site-wide: 52,264 out of 101,163
  • Since beginning of last month:
    • Site-wide: 38,215 out of 101,163

Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology

bioinformatics more details view paper
  • Downloaded 1,389 times
  • Download rankings, all-time:
    • Site-wide: 7,777 out of 101,163
    • In bioinformatics: 1,322 out of 9,286
  • Year to date:
    • Site-wide: 33,713 out of 101,163
  • Since beginning of last month:
    • Site-wide: 57,937 out of 101,163

The genetics of Bene Israel from India reveals both substantial Jewish and Indian ancestry

genetics more details view paper
  • Downloaded 1,211 times
  • Download rankings, all-time:
    • Site-wide: 9,841 out of 101,163
    • In genetics: 668 out of 5,034
  • Year to date:
    • Site-wide: 59,212 out of 101,163
  • Since beginning of last month:
    • Site-wide: 58,776 out of 101,163

RL-SKAT: An exact and efficient score test for heritability and set tests

genetics more details view paper
  • Downloaded 1,124 times
  • Download rankings, all-time:
    • Site-wide: 11,128 out of 101,163
    • In genetics: 735 out of 5,034
  • Year to date:
    • Site-wide: 47,116 out of 101,163
  • Since beginning of last month:
    • Site-wide: 30,988 out of 101,163

Faucet: streaming de novo assembly graph construction

bioinformatics more details view paper
  • Downloaded 1,117 times
  • Download rankings, all-time:
    • Site-wide: 11,258 out of 101,163
    • In bioinformatics: 1,798 out of 9,286
  • Year to date:
    • Site-wide: 74,587 out of 101,163
  • Since beginning of last month:
    • Site-wide: 71,005 out of 101,163

Optimal design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis

bioinformatics more details view paper
  • Downloaded 1,110 times
  • Download rankings, all-time:
    • Site-wide: 11,352 out of 101,163
    • In bioinformatics: 1,811 out of 9,286
  • Year to date:
    • Site-wide: 9,634 out of 101,163
  • Since beginning of last month:
    • Site-wide: 20,097 out of 101,163

An Ancestry Based Approach for Detecting Interactions

genetics more details view paper
  • Downloaded 1,065 times
  • Download rankings, all-time:
    • Site-wide: 12,120 out of 101,163
    • In genetics: 798 out of 5,034
  • Year to date:
    • Site-wide: 73,430 out of 101,163
  • Since beginning of last month:
    • Site-wide: 80,175 out of 101,163

A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference

bioinformatics more details view paper
  • Downloaded 959 times
  • Download rankings, all-time:
    • Site-wide: 14,347 out of 101,163
    • In bioinformatics: 2,203 out of 9,286
  • Year to date:
    • Site-wide: 87,987 out of 101,163
  • Since beginning of last month:
    • Site-wide: 81,302 out of 101,163

Genome-wide methylation data mirror ancestry information

genetics more details view paper
  • Downloaded 955 times
  • Download rankings, all-time:
    • Site-wide: 14,434 out of 101,163
    • In genetics: 929 out of 5,034
  • Year to date:
    • Site-wide: 82,608 out of 101,163
  • Since beginning of last month:
    • Site-wide: 80,012 out of 101,163

CRISPys: Optimal sgRNA design for editing multiple members of a gene family using the CRISPR system

bioinformatics more details view paper
  • Downloaded 795 times
  • Download rankings, all-time:
    • Site-wide: 19,291 out of 101,163
    • In bioinformatics: 2,837 out of 9,286
  • Year to date:
    • Site-wide: 37,246 out of 101,163
  • Since beginning of last month:
    • Site-wide: 62,543 out of 101,163

Scalable probabilistic PCA for large-scale genetic variation data

bioinformatics more details view paper
  • Downloaded 786 times
  • Download rankings, all-time:
    • Site-wide: 19,657 out of 101,163
    • In bioinformatics: 2,889 out of 9,286
  • Year to date:
    • Site-wide: 13,053 out of 101,163
  • Since beginning of last month:
    • Site-wide: 14,166 out of 101,163

Preoperative predictions of in-hospital mortality using electronic medical record data

bioinformatics more details view paper
  • Downloaded 674 times
  • Download rankings, all-time:
    • Site-wide: 24,600 out of 101,163
    • In bioinformatics: 3,393 out of 9,286
  • Year to date:
    • Site-wide: 33,276 out of 101,163
  • Since beginning of last month:
    • Site-wide: 28,787 out of 101,163

Fast and accurate construction of confidence intervals for heritability

genetics more details view paper
  • Downloaded 619 times
  • Download rankings, all-time:
    • Site-wide: 27,679 out of 101,163
    • In genetics: 1,660 out of 5,034
  • Year to date:
    • Site-wide: 68,384 out of 101,163
  • Since beginning of last month:
    • Site-wide: 44,350 out of 101,163

Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM

bioinformatics more details view paper
  • Downloaded 587 times
  • Download rankings, all-time:
    • Site-wide: 29,695 out of 101,163
    • In bioinformatics: 3,924 out of 9,286
  • Year to date:
    • Site-wide: 16,229 out of 101,163
  • Since beginning of last month:
    • Site-wide: 73,389 out of 101,163

BATMAN: fast and accurate integration of single-cell RNA-Seq datasets via minimum-weight matching

bioinformatics more details view paper
  • Downloaded 559 times
  • Download rankings, all-time:
    • Site-wide: 31,690 out of 101,163
    • In bioinformatics: 4,111 out of 9,286
  • Year to date:
    • Site-wide: 6,409 out of 101,163
  • Since beginning of last month:
    • Site-wide: 4,988 out of 101,163

Distinguishing biological from technical sources of variation by leveraging multiple methylation datasets

bioinformatics more details view paper
  • Downloaded 520 times
  • Download rankings, all-time:
    • Site-wide: 34,740 out of 101,163
    • In bioinformatics: 4,404 out of 9,286
  • Year to date:
    • Site-wide: 57,707 out of 101,163
  • Since beginning of last month:
    • Site-wide: 95,533 out of 101,163

The Effects of Migration and Assortative Mating on Admixture Linkage Disequilibrium

genetics more details view paper
  • Downloaded 519 times
  • Download rankings, all-time:
    • Site-wide: 34,823 out of 101,163
    • In genetics: 2,024 out of 5,034
  • Year to date:
    • Site-wide: 98,710 out of 101,163
  • Since beginning of last month:
    • Site-wide: 99,135 out of 101,163

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News

  • 20 Oct 2020: Support for sorting preprints using Twitter activity has been removed, at least temporarily, until a new source of social media activity data becomes available.
  • 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
  • 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
  • 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
  • 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
  • 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
  • 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
  • 22 Jan 2019: Nature just published an article about Rxivist and our data.
  • 13 Jan 2019: The Rxivist preprint is live!