Rxivist logo

Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,249 bioRxiv papers from 318,847 authors.

Author: Yun Li

Rankings

  • All-time downloads: 33,653 (rank: 618 out of 318,928)
  • Categories:
    • bioinformatics: 8,505 (rank: 476 out of 27,654)
    • cell biology: 167 (rank: 19,302 (tie) out of 22,380)
    • developmental biology: 182 (rank: 10,364 (tie) out of 12,248)
    • epidemiology: 2,777 (rank: 255 out of 9,541)
    • genetics: 16,542 (rank: 581 out of 31,247)
    • genomics: 2,931 (rank: 5,475 out of 35,528)
    • microbiology: 988 (rank: 4,531 (tie) out of 33,259)
    • neuroscience: 857 (rank: 14,495 (tie) out of 53,863)
    • scientific communication and education: 704 (rank: 865 (tie) out of 2,759)

Downloads per author, site-wide

Preprints

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
  • Downloaded 8,908 times
  • Download rankings, all-time:
    • Site-wide: 180 out of 73,279
    • In genetics: 14 out of 4,026
  • Year to date:
    • Site-wide: 14,534 out of 73,279
  • Since beginning of last month:
    • Site-wide: 14,534 out of 73,279

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 2,655 times
  • Download rankings, all-time:
    • Site-wide: 1,624 out of 73,279
    • In bioinformatics: 324 out of 7,144
  • Year to date:
    • Site-wide: 34,747 out of 73,279
  • Since beginning of last month:
    • Site-wide: 34,747 out of 73,279

An epigenetic biomarker of aging for lifespan and healthspan

epidemiology more details view paper
  • Downloaded 2,580 times
  • Download rankings, all-time:
    • Site-wide: 1,701 out of 73,279
    • In epidemiology: 16 out of 1,556
  • Year to date:
    • Site-wide: 12,396 out of 73,279
  • Since beginning of last month:
    • Site-wide: 12,396 out of 73,279

SAFE-clustering: Single-cell Aggregated (From Ensemble) Clustering for Single-cell RNA-seq Data

bioinformatics more details view paper
  • Downloaded 2,380 times
  • Download rankings, all-time:
    • Site-wide: 1,999 out of 73,279
    • In bioinformatics: 397 out of 7,144
  • Year to date:
    • Site-wide: 16,695 out of 73,279
  • Since beginning of last month:
    • Site-wide: 16,695 out of 73,279

Large-scale GWAS reveals genetic architecture of brain white matter microstructure and genetic overlap with cognitive and mental health traits (n=17,706)

genetics more details view paper
  • Downloaded 1,409 times
  • Download rankings, all-time:
    • Site-wide: 4,911 out of 73,279
    • In genetics: 397 out of 4,026
  • Year to date:
    • Site-wide: 5,956 out of 73,279
  • Since beginning of last month:
    • Site-wide: 5,956 out of 73,279

Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
  • Downloaded 1,352 times
  • Download rankings, all-time:
    • Site-wide: 5,239 out of 73,279
    • In genomics: 908 out of 4,867
  • Year to date:
    • Site-wide: 23,938 out of 73,279
  • Since beginning of last month:
    • Site-wide: 23,938 out of 73,279

Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
  • Downloaded 1,350 times
  • Download rankings, all-time:
    • Site-wide: 5,257 out of 73,279
    • In genetics: 416 out of 4,026
  • Year to date:
    • Site-wide: 7,777 out of 73,279
  • Since beginning of last month:
    • Site-wide: 7,777 out of 73,279

MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
  • Downloaded 998 times
  • Download rankings, all-time:
    • Site-wide: 8,670 out of 73,279
    • In bioinformatics: 1,498 out of 7,144
  • Year to date:
    • Site-wide: 26,878 out of 73,279
  • Since beginning of last month:
    • Site-wide: 26,878 out of 73,279

The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3

microbiology more details view paper
  • Downloaded 988 times
  • Download rankings, all-time:
    • Site-wide: 8,837 out of 73,279
    • In microbiology: 393 out of 5,964
  • Year to date:
    • Site-wide: 10,938 out of 73,279
  • Since beginning of last month:
    • Site-wide: 10,938 out of 73,279

Trans-ethnic and ancestry-specific blood-cell genetics in 746,667 individuals from 5 global populations

genetics more details view paper
  • Downloaded 956 times
  • Download rankings, all-time:
    • Site-wide: 9,367 out of 73,279
    • In genetics: 691 out of 4,026
  • Year to date:
    • Site-wide: 109 out of 73,279
  • Since beginning of last month:
    • Site-wide: 109 out of 73,279

SCDC: Bulk Gene Expression Deconvolution by Multiple Single-Cell RNA Sequencing References

bioinformatics more details view paper
  • Downloaded 904 times
  • Download rankings, all-time:
    • Site-wide: 10,206 out of 73,279
    • In bioinformatics: 1,730 out of 7,144
  • Year to date:
    • Site-wide: 2,273 out of 73,279
  • Since beginning of last month:
    • Site-wide: 2,273 out of 73,279

A Possible Role Of Microglia In Zika Virus Infection Of The Fetal Human Brain

neuroscience more details view paper
  • Downloaded 857 times
  • Download rankings, all-time:
    • Site-wide: 11,150 out of 73,279
    • In neuroscience: 1,786 out of 13,178
  • Year to date:
    • Site-wide: 40,146 out of 73,279
  • Since beginning of last month:
    • Site-wide: 40,146 out of 73,279

SMNN: Batch Effect Correction for Single-cell RNA-seq data via Supervised Mutual Nearest Neighbor Detection

bioinformatics more details view paper
  • Downloaded 798 times
  • Download rankings, all-time:
    • Site-wide: 12,372 out of 73,279
    • In bioinformatics: 2,037 out of 7,144
  • Year to date:
    • Site-wide: 9,323 out of 73,279
  • Since beginning of last month:
    • Site-wide: 9,323 out of 73,279

GWAS of epigenetic ageing rates in blood reveals a critical role for TERT

genetics more details view paper
  • Downloaded 736 times
  • Download rankings, all-time:
    • Site-wide: 13,924 out of 73,279
    • In genetics: 947 out of 4,026
  • Year to date:
    • Site-wide: 38,709 out of 73,279
  • Since beginning of last month:
    • Site-wide: 38,709 out of 73,279

Heritability of regional brain volumes in large-scale neuroimaging and genetic studies

genetics more details view paper
  • Downloaded 718 times
  • Download rankings, all-time:
    • Site-wide: 14,447 out of 73,279
    • In genetics: 984 out of 4,026
  • Year to date:
    • Site-wide: 19,309 out of 73,279
  • Since beginning of last month:
    • Site-wide: 19,309 out of 73,279

The Big Five, Self-efficacy, and Self-control in Boxers

scientific communication and education more details view paper
  • Downloaded 704 times
  • Download rankings, all-time:
    • Site-wide: 14,868 out of 73,279
    • In scientific communication and education: 148 out of 520
  • Year to date:
    • Site-wide: 15,145 out of 73,279
  • Since beginning of last month:
    • Site-wide: 15,145 out of 73,279

HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
  • Downloaded 664 times
  • Download rankings, all-time:
    • Site-wide: 16,157 out of 73,279
    • In genetics: 1,091 out of 4,026
  • Year to date:
    • Site-wide: 69,870 out of 73,279
  • Since beginning of last month:
    • Site-wide: 69,870 out of 73,279

Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
  • Downloaded 619 times
  • Download rankings, all-time:
    • Site-wide: 17,931 out of 73,279
    • In genomics: 2,173 out of 4,867
  • Year to date:
    • Site-wide: 8,161 out of 73,279
  • Since beginning of last month:
    • Site-wide: 8,161 out of 73,279

GWAS of 19,629 individuals identifies novel genetic variants for regional brain volumes and refines their genetic co-architecture with cognitive and mental health traits

genetics more details view paper
  • Downloaded 604 times
  • Download rankings, all-time:
    • Site-wide: 18,567 out of 73,279
    • In genetics: 1,239 out of 4,026
  • Year to date:
    • Site-wide: 12,765 out of 73,279
  • Since beginning of last month:
    • Site-wide: 12,765 out of 73,279

SAME-clustering: Single-cell Aggregated Clustering via Mixture Model Ensemble

bioinformatics more details view paper
  • Downloaded 505 times
  • Download rankings, all-time:
    • Site-wide: 23,535 out of 73,279
    • In bioinformatics: 3,300 out of 7,144
  • Year to date:
    • Site-wide: 18,579 out of 73,279
  • Since beginning of last month:
    • Site-wide: 18,579 out of 73,279

Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations

genomics more details view paper
  • Downloaded 490 times
  • Download rankings, all-time:
    • Site-wide: 24,446 out of 73,279
    • In genomics: 2,642 out of 4,867
  • Year to date:
    • Site-wide: 13,426 out of 73,279
  • Since beginning of last month:
    • Site-wide: 13,426 out of 73,279

Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
  • Downloaded 452 times
  • Download rankings, all-time:
    • Site-wide: 26,967 out of 73,279
    • In genetics: 1,733 out of 4,026
  • Year to date:
    • Site-wide: 32,999 out of 73,279
  • Since beginning of last month:
    • Site-wide: 32,999 out of 73,279

Transcriptome-wide association analysis of 211 neuroimaging traits identifies new genes for brain structures and yields insights into the gene-level pleiotropy with other complex traits

genetics more details view paper
  • Downloaded 332 times
  • Download rankings, all-time:
    • Site-wide: 37,421 out of 73,279
    • In genetics: 2,275 out of 4,026
  • Year to date:
    • Site-wide: 9,133 out of 73,279
  • Since beginning of last month:
    • Site-wide: 9,133 out of 73,279

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
  • Downloaded 299 times
  • Download rankings, all-time:
    • Site-wide: 40,963 out of 73,279
    • In genomics: 3,625 out of 4,867
  • Year to date:
    • Site-wide: 11,050 out of 73,279
  • Since beginning of last month:
    • Site-wide: 11,050 out of 73,279

Association between ApoE polymorphism and type 2 diabetes: A meta-analysis of 59 studies

genetics more details view paper
  • Downloaded 286 times
  • Download rankings, all-time:
    • Site-wide: 42,559 out of 73,279
    • In genetics: 2,541 out of 4,026
  • Year to date:
    • Site-wide: 17,531 out of 73,279
  • Since beginning of last month:
    • Site-wide: 17,531 out of 73,279

FIREcaller: an R package for detecting frequently interacting regions from Hi-C data

bioinformatics more details view paper
  • Downloaded 265 times
  • Download rankings, all-time:
    • Site-wide: 45,172 out of 73,279
    • In bioinformatics: 5,230 out of 7,144
  • Year to date:
    • Site-wide: 23,486 out of 73,279
  • Since beginning of last month:
    • Site-wide: 23,486 out of 73,279

Integrative methylome and transcriptome analysis of Japanese flounder (Paralichthys olivaceus) skeletal muscle during development

epidemiology more details view paper
  • Downloaded 197 times
  • Download rankings, all-time:
    • Site-wide: 54,793 out of 73,279
    • In epidemiology: 1,081 out of 1,556
  • Year to date:
    • Site-wide: 53,436 out of 73,279
  • Since beginning of last month:
    • Site-wide: 53,436 out of 73,279

Generation of Cynomolgus Monkeys (Macaca fascicularis) Embryos with ICSI Based on the MII-Stage Oocytes Acquired by Personalized Superovulation Protocol

developmental biology more details view paper
  • Downloaded 182 times
  • Download rankings, all-time:
    • Site-wide: 57,154 out of 73,279
    • In developmental biology: 1,786 out of 2,199
  • Year to date:
    • Site-wide: 46,495 out of 73,279
  • Since beginning of last month:
    • Site-wide: 46,495 out of 73,279

Methylome-Wide Association Study Of Central Adiposity Implicates Genes Involved In Immune And Endocrine Systems

genomics more details view paper
  • Downloaded 171 times
  • Download rankings, all-time:
    • Site-wide: 58,903 out of 73,279
    • In genomics: 4,398 out of 4,867
  • Year to date:
    • Site-wide: 13,788 out of 73,279
  • Since beginning of last month:
    • Site-wide: 13,788 out of 73,279

Overarching control of autophagy and DNA damage response by CHD6 revealed by modeling a rare human pathology

cell biology more details view paper
  • Downloaded 167 times
  • Download rankings, all-time:
    • Site-wide: 59,531 out of 73,279
    • In cell biology: 2,976 out of 3,620
  • Year to date:
    • Site-wide: 2,062 out of 73,279
  • Since beginning of last month:
    • Site-wide: 2,062 out of 73,279

Generalized Multi-SNP Mediation Intersection-Union Test

genetics more details view paper
  • Downloaded 127 times
  • Download rankings, all-time:
    • Site-wide: 65,454 out of 73,279
    • In genetics: 3,688 out of 4,026
  • Year to date:
    • Site-wide: 52,968 out of 73,279
  • Since beginning of last month:
    • Site-wide: 52,968 out of 73,279

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News