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Author: S. Cenk Sahinalp

Rankings

  • All-time downloads: 22,582 (rank: 2,065 out of 365,939)
  • Categories:
    • bioinformatics: 5,553 (rank: 1,458 out of 31,546)
    • cancer biology: 16,600 (rank: 53 out of 24,792)
    • systems biology: 429 (rank: 6,385 (tie) out of 10,888)

Downloads per author, site-wide

Preprints

The evolutionary history of 2,658 cancers

cancer biology more details view paper
  • Downloaded 9,197 times
  • Download rankings, all-time:
    • Site-wide: 261 out of 85,062
    • In cancer biology: 6 out of 2,984
  • Year to date:
    • Site-wide: 1,090 out of 85,062
  • Since beginning of last month:
    • Site-wide: 6,851 out of 85,062

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

cancer biology more details view paper
  • Downloaded 4,752 times
  • Download rankings, all-time:
    • Site-wide: 763 out of 85,062
    • In cancer biology: 23 out of 2,984
  • Year to date:
    • Site-wide: 1,592 out of 85,062
  • Since beginning of last month:
    • Site-wide: 1,507 out of 85,062

Pathway and network analysis of more than 2,500 whole cancer genomes

cancer biology more details view paper
  • Downloaded 1,443 times
  • Download rankings, all-time:
    • Site-wide: 5,900 out of 85,062
    • In cancer biology: 152 out of 2,984
  • Year to date:
    • Site-wide: 17,019 out of 85,062
  • Since beginning of last month:
    • Site-wide: 22,598 out of 85,062

BAP1 Haploinsufficiency Predicts a Distinct Immunogenic Class of Malignant Peritoneal Mesothelioma

cancer biology more details view paper
  • Downloaded 1,208 times
  • Download rankings, all-time:
    • Site-wide: 7,943 out of 85,062
    • In cancer biology: 212 out of 2,984
  • Year to date:
    • Site-wide: 23,813 out of 85,062
  • Since beginning of last month:
    • Site-wide: 35,474 out of 85,062

Integrative inference of subclonal tumour evolution from single-cell and bulk sequencing data

bioinformatics more details view paper
  • Downloaded 1,189 times
  • Download rankings, all-time:
    • Site-wide: 8,141 out of 85,062
    • In bioinformatics: 1,397 out of 8,142
  • Year to date:
    • Site-wide: 63,094 out of 85,062
  • Since beginning of last month:
    • Site-wide: 82,414 out of 85,062

Sketching Algorithms for Genomic Data Analysis and Querying in a Secure Enclave

bioinformatics more details view paper
  • Downloaded 745 times
  • Download rankings, all-time:
    • Site-wide: 17,069 out of 85,062
    • In bioinformatics: 2,604 out of 8,142
  • Year to date:
    • Site-wide: 14,937 out of 85,062
  • Since beginning of last month:
    • Site-wide: 18,448 out of 85,062

MechRNA: prediction of lncRNA mechanisms from RNA-RNA and RNA-protein interactions

bioinformatics more details view paper
  • Downloaded 699 times
  • Download rankings, all-time:
    • Site-wide: 18,742 out of 85,062
    • In bioinformatics: 2,788 out of 8,142
  • Year to date:
    • Site-wide: 68,779 out of 85,062
  • Since beginning of last month:
    • Site-wide: 66,860 out of 85,062

PhISCS - A Combinatorial Approach for Sub-perfect Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data

bioinformatics more details view paper
  • Downloaded 695 times
  • Download rankings, all-time:
    • Site-wide: 18,918 out of 85,062
    • In bioinformatics: 2,811 out of 8,142
  • Year to date:
    • Site-wide: 45,749 out of 85,062
  • Since beginning of last month:
    • Site-wide: 50,885 out of 85,062

deStruct: Accurate Rearrangement Detection using Breakpoint Specific Realignment

bioinformatics more details view paper
  • Downloaded 677 times
  • Download rankings, all-time:
    • Site-wide: 19,616 out of 85,062
    • In bioinformatics: 2,893 out of 8,142
  • Year to date:
    • Site-wide: 61,098 out of 85,062
  • Since beginning of last month:
    • Site-wide: 71,009 out of 85,062

Computational proteogenomic identification and functional interpretation of translated fusions and micro structural variations in cancer

bioinformatics more details view paper
  • Downloaded 481 times
  • Download rankings, all-time:
    • Site-wide: 31,008 out of 85,062
    • In bioinformatics: 4,032 out of 8,142
  • Year to date:
    • Site-wide: 56,934 out of 85,062
  • Since beginning of last month:
    • Site-wide: 80,539 out of 85,062

Combinatorial Detection of Conserved Alteration Patterns for Identifying Cancer Subnetworks

systems biology more details view paper
  • Downloaded 429 times
  • Download rankings, all-time:
    • Site-wide: 35,479 out of 85,062
    • In systems biology: 1,025 out of 2,238
  • Year to date:
    • Site-wide: 58,513 out of 85,062
  • Since beginning of last month:
    • Site-wide: 45,371 out of 85,062

Tumor Phylogeny Topology Inference via Deep Learning

bioinformatics more details view paper
  • Downloaded 401 times
  • Download rankings, all-time:
    • Site-wide: 38,239 out of 85,062
    • In bioinformatics: 4,691 out of 8,142
  • Year to date:
    • Site-wide: 4,127 out of 85,062
  • Since beginning of last month:
    • Site-wide: 22,600 out of 85,062

PhISCS-BnB: A Fast Branch and Bound Algorithm for the Perfect Tumor Phylogeny Reconstruction Problem

bioinformatics more details view paper
  • Downloaded 353 times
  • Download rankings, all-time:
    • Site-wide: 43,420 out of 85,062
    • In bioinformatics: 5,167 out of 8,142
  • Year to date:
    • Site-wide: 5,005 out of 85,062
  • Since beginning of last month:
    • Site-wide: 9,549 out of 85,062

Identification of Conserved Evolutionary Trajectories in Tumors

bioinformatics more details view paper
  • Downloaded 313 times
  • Download rankings, all-time:
    • Site-wide: 48,637 out of 85,062
    • In bioinformatics: 5,560 out of 8,142
  • Year to date:
    • Site-wide: 6,073 out of 85,062
  • Since beginning of last month:
    • Site-wide: 12,148 out of 85,062

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