Author: Roger Pique-Regi

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Preprints

Environmental enrichment induces epigenomic and genome organization changes relevant for cognitive function

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Gut microbiota has a widespread and modifiable effect on host gene regulation

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Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells

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Which genetic variants in DNase I sensitive regions are functional?

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QuASAR: Quantitative Allele Specific Analysis of Reads

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Does the human placenta express the canonical cell entry mediators for SARS-CoV-2?

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Cross-population Joint Analysis of eQTLs: Fine Mapping and Functional Annotation

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High throughput characterization of genetic effects on DNA:protein binding and gene transcription

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QuASAR-MPRA: Accurate allele-specific analysis for massively parallel reporter assays

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Efficient Integrative Multi-SNP Association Analysis using Deterministic Approximation of Posteriors

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Bayesian Multi-SNP Genetic Association Analysis: Control of FDR and Use of Summary Statistics

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Investigating tissue-relevant causal molecular mechanisms of complex traits using probabilistic TWAS analysis

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Single Cell Transcriptional Signatures of the Human Placenta in Term and Preterm Parturition

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Genetic and transcriptional analysis of human host response to healthy gut microbiome

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Mendelian Randomization Analysis Dissects the Relationship between NAFLD, T2D, and Obesity and Provides Implications to Precision Medicine

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Integrating Molecular QTL Data into Genome-wide Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization

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Interpreting coronary artery disease risk through gene-environment interactions in gene regulation

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circuitSNPs: Predicting genetic effects using a Neural Network to model regulatory modules of DNase-seq footprints

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Traumatic brain injury causes retention of long introns in metabolic genes via regulation of intronic Histone 3 lysine 36 methylation levels in the sub-acute phase of injury

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Social status alters chromatin accessibility and the gene regulatory response to glucocorticoid stimulation in rhesus macaques

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Probabilistic Colocalization of Genetic Variants from Complex and Molecular Traits: Promise and Limitations

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Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions

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Interspecies variation in hominid gut microbiota controls host gene regulation

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BAGSE: a Bayesian hierarchical model approach for gene set enrichment analysis

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Psychosocial experiences modulate asthma-associated genes through gene-environment interactions

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A termination-independent role of Rat1 in cotranscriptional splicing

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