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Author: Erik Garrison

Rankings

  • All-time downloads: 41,613 (rank: 2,986 )
  • Categories:
    • bioinformatics: 16,682 (rank: 321 )
    • evolutionary biology: 961 (rank: 6,255 (tie) )
    • genetics: 487 (rank: 24,534 (tie) )
    • genomics: 21,658 (rank: 457 )
    • immunology: 1,825 (rank: 3,735 (tie) )

Downloads per author, site-wide

Preprints

Genome Graphs

bioinformatics more details view paper
  • Downloaded 8,952 times
  • Download rankings, all-time:
    • Site-wide: 805
    • In bioinformatics: 44
  • Year to date:
    • Site-wide: 4,618
  • Since beginning of last month:
    • Site-wide: 9,166

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 5,228 times
  • Download rankings, all-time:
    • Site-wide: 1,635
    • In genomics: 174
  • Year to date:
    • Site-wide: 21,845
  • Since beginning of last month:
    • Site-wide: 20,271

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,549 times
  • Download rankings, all-time:
    • Site-wide: 1,978
    • In genomics: 225
  • Year to date:
    • Site-wide: 22,788
  • Since beginning of last month:
    • Site-wide: 16,769

Towards complete and error-free genome assemblies of all vertebrate species

genomics more details view paper
  • Downloaded 4,254 times
  • Download rankings, all-time:
    • Site-wide: 2,173
    • In genomics: 257
  • Year to date:
    • Site-wide: 1,687
  • Since beginning of last month:
    • Site-wide: 2,535

Sequence variation aware genome references and read mapping with the variation graph toolkit

genomics more details view paper
  • Downloaded 3,802 times
  • Download rankings, all-time:
    • Site-wide: 2,572
    • In genomics: 313
  • Year to date:
    • Site-wide: 39,583
  • Since beginning of last month:
    • Site-wide: 35,868

Landscape and Selection of Vaccine Epitopes in SARS-CoV-2

immunology more details view paper
  • Downloaded 1,825 times
  • Download rankings, all-time:
    • Site-wide: 7,467
    • In immunology: 198
  • Year to date:
    • Site-wide: 12,379
  • Since beginning of last month:
    • Site-wide: 11,692

Removing reference bias and improving indel calling in ancient DNA data analysis by mapping to a sequence variation graph

genomics more details view paper
  • Downloaded 1,687 times
  • Download rankings, all-time:
    • Site-wide: 8,446
    • In genomics: 976
  • Year to date:
    • Site-wide: 10,733
  • Since beginning of last month:
    • Site-wide: 14,690

Genotyping structural variants in pangenome graphs using the vg toolkit

bioinformatics more details view paper
  • Downloaded 1,581 times
  • Download rankings, all-time:
    • Site-wide: 9,330
    • In bioinformatics: 1,169
  • Year to date:
    • Site-wide: 24,153
  • Since beginning of last month:
    • Site-wide: 29,996

A Graph Extension of the Positional Burrows-Wheeler Transform and its Applications

bioinformatics more details view paper
  • Downloaded 1,444 times
  • Download rankings, all-time:
    • Site-wide: 10,643
    • In bioinformatics: 1,353
  • Year to date:
    • Site-wide: 114,288
  • Since beginning of last month:
    • Site-wide: 109,385

Genome Graphs and the Evolution of Genome Inference

bioinformatics more details view paper
  • Downloaded 1,351 times
  • Download rankings, all-time:
    • Site-wide: 11,812
    • In bioinformatics: 1,487
  • Year to date:
    • Site-wide: 106,603
  • Since beginning of last month:
    • Site-wide: 120,165

Human genomic regions with exceptionally high or low levels of population differentiation identified from 911 whole-genome sequences

genomics more details view paper
  • Downloaded 1,285 times
  • Download rankings, all-time:
    • Site-wide: 12,705
    • In genomics: 1,416
  • Year to date:
    • Site-wide: 112,151
  • Since beginning of last month:
    • Site-wide: 100,851

Superbubbles, Ultrabubbles and Cacti

bioinformatics more details view paper
  • Downloaded 1,128 times
  • Download rankings, all-time:
    • Site-wide: 15,462
    • In bioinformatics: 1,940
  • Year to date:
    • Site-wide: 74,377
  • Since beginning of last month:
    • Site-wide: 108,515

Purging of deleterious variants due to drift and founder effect in Italian populations with extended autozygosity

evolutionary biology more details view paper
  • Downloaded 961 times
  • Download rankings, all-time:
    • Site-wide: 19,648
    • In evolutionary biology: 901
  • Year to date:
    • Site-wide: 83,581
  • Since beginning of last month:
    • Site-wide: 59,319

Genotyping common, large structural variations in 5,202 genomes using pangenomes, the Giraffe mapper, and the vg toolkit

bioinformatics more details view paper
  • Downloaded 882 times
  • Download rankings, all-time:
    • Site-wide: 22,303
    • In bioinformatics: 2,712
  • Year to date:
    • Site-wide: 1,401
  • Since beginning of last month:
    • Site-wide: 350

A Diploid Assembly-based Benchmark for Variants in the Major Histocompatibility Complex

genomics more details view paper
  • Downloaded 853 times
  • Download rankings, all-time:
    • Site-wide: 23,369
    • In genomics: 2,299
  • Year to date:
    • Site-wide: 31,017
  • Since beginning of last month:
    • Site-wide: 57,679

Haplotype-aware graph indexes

bioinformatics more details view paper
  • Downloaded 780 times
  • Download rankings, all-time:
    • Site-wide: 26,447
    • In bioinformatics: 3,153
  • Year to date:
    • Site-wide: 49,644
  • Since beginning of last month:
    • Site-wide: 31,264

Succinct dynamic variation graphs

bioinformatics more details view paper
  • Downloaded 564 times
  • Download rankings, all-time:
    • Site-wide: 40,609
    • In bioinformatics: 4,461
  • Year to date:
    • Site-wide: 84,963
  • Since beginning of last month:
    • Site-wide: 26,883

Genomic diversity and novel genome-wide association with fruit morphology in Capsicum, from 746k polymorphic sites.

genetics more details view paper
  • Downloaded 487 times
  • Download rankings, all-time:
    • Site-wide: 48,491
    • In genetics: 2,366
  • Year to date:
    • Site-wide: 62,207
  • Since beginning of last month:
    • Site-wide: 68,832

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