Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,594 bioRxiv papers from 298,187 authors.

Downloads per author, site-wide

Preprints

The Human Cell Atlas

• Downloaded 11,789 times
• Download rankings, all-time:
  • Site-wide: 86 out of 67,594
  • In cell biology: 3 out of 3,290
• Year to date:
  • Site-wide: 4,947 out of 67,594
• Since beginning of last month:
  • Site-wide: 10,075 out of 67,594

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

• Downloaded 2,302 times
• Download rankings, all-time:
  • Site-wide: 1,924 out of 67,594
  • In genomics: 418 out of 4,581
• Year to date:
  • Site-wide: 49,297 out of 67,594
• Since beginning of last month:
  • Site-wide: 44,480 out of 67,594

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

• Downloaded 2,282 times
• Download rankings, all-time:
  • Site-wide: 1,953 out of 67,594
  • In genomics: 423 out of 4,581
• Year to date:
  • Site-wide: 5,814 out of 67,594
• Since beginning of last month:
  • Site-wide: 35,181 out of 67,594

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

• Downloaded 2,003 times
• Download rankings, all-time:
  • Site-wide: 2,450 out of 67,594
  • In genomics: 506 out of 4,581
• Year to date:
  • Site-wide: 47,592 out of 67,594
• Since beginning of last month:
  • Site-wide: 55,154 out of 67,594

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

• Downloaded 1,960 times
• Download rankings, all-time:
  • Site-wide: 2,545 out of 67,594
  • In genomics: 526 out of 4,581
• Year to date:
  • Site-wide: 6,167 out of 67,594
• Since beginning of last month:
  • Site-wide: 12,719 out of 67,594

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

• Downloaded 1,510 times
• Download rankings, all-time:
  • Site-wide: 3,968 out of 67,594
  • In genomics: 722 out of 4,581
• Year to date:
  • Site-wide: 4,892 out of 67,594
• Since beginning of last month:
  • Site-wide: 29,952 out of 67,594

The landscape of viral associations in human cancers

• Downloaded 1,503 times
• Download rankings, all-time:
  • Site-wide: 4,006 out of 67,594
  • In cancer biology: 102 out of 2,278
• Year to date:
  • Site-wide: 1,746 out of 67,594
• Since beginning of last month:
  • Site-wide: 5,049 out of 67,594

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

• Downloaded 1,273 times
• Download rankings, all-time:
  • Site-wide: 5,249 out of 67,594
  • In genomics: 915 out of 4,581
• Year to date:
  • Site-wide: 16,025 out of 67,594
• Since beginning of last month:
  • Site-wide: 25,572 out of 67,594

Single nucleus RNA sequencing maps acinar cell states in a human pancreas cell atlas

• Downloaded 1,202 times
• Download rankings, all-time:
  • Site-wide: 5,778 out of 67,594
  • In genomics: 974 out of 4,581
• Year to date:
  • Site-wide: 1,449 out of 67,594
• Since beginning of last month:
  • Site-wide: 952 out of 67,594

Genomic footprints of activated telomere maintenance mechanisms in cancer

• Downloaded 1,172 times
• Download rankings, all-time:
  • Site-wide: 6,048 out of 67,594
  • In genomics: 1,012 out of 4,581
• Year to date:
  • Site-wide: 10,481 out of 67,594
• Since beginning of last month:
  • Site-wide: 21,604 out of 67,594

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

• Downloaded 1,017 times
• Download rankings, all-time:
  • Site-wide: 7,604 out of 67,594
  • In cancer biology: 202 out of 2,278
• Year to date:
  • Site-wide: 1,930 out of 67,594
• Since beginning of last month:
  • Site-wide: 2,543 out of 67,594

ACEseq - allele specific copy number estimation from whole genome sequencing

• Downloaded 1,007 times
• Download rankings, all-time:
  • Site-wide: 7,726 out of 67,594
  • In bioinformatics: 1,365 out of 6,655
• Year to date:
  • Site-wide: 16,100 out of 67,594
• Since beginning of last month:
  • Site-wide: 14,424 out of 67,594

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

• Downloaded 895 times
• Download rankings, all-time:
  • Site-wide: 9,340 out of 67,594
  • In genomics: 1,409 out of 4,581
• Year to date:
  • Site-wide: 28,633 out of 67,594
• Since beginning of last month:
  • Site-wide: 32,567 out of 67,594

Segmentation-free inference of cell-types from in situ transcriptomics data

• Downloaded 861 times
• Download rankings, all-time:
  • Site-wide: 9,946 out of 67,594
  • In bioinformatics: 1,713 out of 6,655
• Year to date:
  • Site-wide: 2,583 out of 67,594
• Since beginning of last month:
  • Site-wide: 1,403 out of 67,594

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

• Downloaded 803 times
• Download rankings, all-time:
  • Site-wide: 11,079 out of 67,594
  • In cancer biology: 328 out of 2,278
• Year to date:
  • Site-wide: 50,448 out of 67,594
• Since beginning of last month:
  • Site-wide: 40,187 out of 67,594

Web-based design and analysis tools for CRISPR base editing

• Downloaded 708 times
• Download rankings, all-time:
  • Site-wide: 13,307 out of 67,594
  • In bioinformatics: 2,152 out of 6,655
• Year to date:
  • Site-wide: 17,560 out of 67,594
• Since beginning of last month:
  • Site-wide: 49,925 out of 67,594

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

• Downloaded 706 times
• Download rankings, all-time:
  • Site-wide: 13,365 out of 67,594
  • In synthetic biology: 221 out of 642
• Year to date:
  • Site-wide: 8,472 out of 67,594
• Since beginning of last month:
  • Site-wide: 32,490 out of 67,594

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

• Downloaded 572 times
• Download rankings, all-time:
  • Site-wide: 17,978 out of 67,594
  • In bioinformatics: 2,715 out of 6,655
• Year to date:
  • Site-wide: 5,279 out of 67,594
• Since beginning of last month:
  • Site-wide: 5,683 out of 67,594

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

• Downloaded 553 times
• Download rankings, all-time:
  • Site-wide: 18,767 out of 67,594
  • In bioinformatics: 2,810 out of 6,655
• Year to date:
  • Site-wide: 35,533 out of 67,594
• Since beginning of last month:
  • Site-wide: 57,262 out of 67,594

Impact of cancer mutational signatures on transcription factor motifs in the human genome

• Downloaded 516 times
• Download rankings, all-time:
  • Site-wide: 20,545 out of 67,594
  • In bioinformatics: 3,009 out of 6,655
• Year to date:
  • Site-wide: 29,712 out of 67,594
• Since beginning of last month:
  • Site-wide: 50,602 out of 67,594

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

• Downloaded 483 times
• Download rankings, all-time:
  • Site-wide: 22,248 out of 67,594
  • In immunology: 416 out of 1,724
• Year to date:
  • Site-wide: 20,378 out of 67,594
• Since beginning of last month:
  • Site-wide: 25,561 out of 67,594

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

• Downloaded 474 times
• Download rankings, all-time:
  • Site-wide: 22,822 out of 67,594
  • In synthetic biology: 355 out of 642
• Year to date:
  • Site-wide: 7,237 out of 67,594
• Since beginning of last month:
  • Site-wide: 9,944 out of 67,594

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

• Downloaded 267 times
• Download rankings, all-time:
  • Site-wide: 40,327 out of 67,594
  • In systems biology: 1,248 out of 1,871
• Year to date:
  • Site-wide: 59,860 out of 67,594
• Since beginning of last month:
  • Site-wide: 56,618 out of 67,594

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

• Downloaded 263 times
• Download rankings, all-time:
  • Site-wide: 40,751 out of 67,594
  • In bioinformatics: 4,815 out of 6,655
• Year to date:
  • Site-wide: 43,890 out of 67,594
• Since beginning of last month:
  • Site-wide: 54,032 out of 67,594

Optogenetic control of Neisseria meningitidis Cas9 genome editing using an engineered, light-switchable anti-CRISPR protein

• Downloaded 199 times
• Download rankings, all-time:
  • Site-wide: 48,972 out of 67,594
  • In synthetic biology: 583 out of 642
• Year to date:
  • Site-wide: 26,260 out of 67,594
• Since beginning of last month:
  • Site-wide: 1,133 out of 67,594

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

• Downloaded 190 times
• Download rankings, all-time:
  • Site-wide: 50,173 out of 67,594
  • In genomics: 3,978 out of 4,581
• Year to date:
  • Site-wide: 27,584 out of 67,594
• Since beginning of last month:
  • Site-wide: 50,814 out of 67,594