Rxivist logo

Author: Roland Eils

Rankings

  • All-time downloads: 61,514 (rank: 2,227 )
  • Categories:
    • bioinformatics: 7,859 (rank: 1,168 (tie) )
    • cancer biology: 5,943 (rank: 404 )
    • cell biology: 13,085 (rank: 189 )
    • genomics: 25,564 (rank: 354 )
    • immunology: 689 (rank: 13,182 (tie) )
    • infectious diseases: 5,695 (rank: 6,689 (tie) )
    • synthetic biology: 2,281 (rank: 614 (tie) )
    • systems biology: 398 (rank: 9,573 (tie) )

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 12,616 times
  • Download rankings, all-time:
    • Site-wide: 583
    • In cell biology: 4
  • Year to date:
    • Site-wide: 19,893
  • Since beginning of last month:
    • Site-wide: 16,035

Cross-talk between the airway epithelium and activated immune cells defines severity in COVID-19

infectious diseases more details view paper
  • Downloaded 5,346 times
  • Download rankings, all-time:
    • Site-wide: 1,818
    • In infectious diseases: 435
  • Year to date:
    • Site-wide: 7,387
  • Since beginning of last month:
    • Site-wide: 9,408

SARS-CoV-2 receptor ACE2 and TMPRSS2 are predominantly expressed in a transient secretory cell type in subsegmental bronchial branches

genomics more details view paper
  • Downloaded 5,013 times
  • Download rankings, all-time:
    • Site-wide: 1,975
    • In genomics: 196
  • Year to date:
    • Site-wide: 15,784
  • Since beginning of last month:
    • Site-wide: 15,857

Single nucleus and in situ RNA sequencing reveals cell topographies in the human pancreas

genomics more details view paper
  • Downloaded 4,820 times
  • Download rankings, all-time:
    • Site-wide: 2,091
    • In genomics: 219
  • Year to date:
    • Site-wide: 2,589
  • Since beginning of last month:
    • Site-wide: 3,096

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

genomics more details view paper
  • Downloaded 2,517 times
  • Download rankings, all-time:
    • Site-wide: 5,311
    • In genomics: 599
  • Year to date:
    • Site-wide: 98,194
  • Since beginning of last month:
    • Site-wide: 75,385

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,409 times
  • Download rankings, all-time:
    • Site-wide: 5,682
    • In genomics: 647
  • Year to date:
    • Site-wide: 95,456
  • Since beginning of last month:
    • Site-wide: 89,254

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 2,338 times
  • Download rankings, all-time:
    • Site-wide: 5,946
    • In genomics: 670
  • Year to date:
    • Site-wide: 34,408
  • Since beginning of last month:
    • Site-wide: 41,537

Cell segmentation-free inference of cell types from in situ transcriptomics data

bioinformatics more details view paper
  • Downloaded 2,178 times
  • Download rankings, all-time:
    • Site-wide: 6,580
    • In bioinformatics: 772
  • Year to date:
    • Site-wide: 5,429
  • Since beginning of last month:
    • Site-wide: 10,074

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,163 times
  • Download rankings, all-time:
    • Site-wide: 6,653
    • In genomics: 741
  • Year to date:
    • Site-wide: 80,756
  • Since beginning of last month:
    • Site-wide: 57,024

The landscape of viral associations in human cancers

cancer biology more details view paper
  • Downloaded 2,002 times
  • Download rankings, all-time:
    • Site-wide: 7,448
    • In cancer biology: 123
  • Year to date:
    • Site-wide: 46,920
  • Since beginning of last month:
    • Site-wide: 43,038

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

genomics more details view paper
  • Downloaded 1,828 times
  • Download rankings, all-time:
    • Site-wide: 8,558
    • In genomics: 929
  • Year to date:
    • Site-wide: 54,709
  • Since beginning of last month:
    • Site-wide: 53,989

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

genomics more details view paper
  • Downloaded 1,650 times
  • Download rankings, all-time:
    • Site-wide: 9,968
    • In genomics: 1,084
  • Year to date:
    • Site-wide: 69,771
  • Since beginning of last month:
    • Site-wide: 87,559

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

cancer biology more details view paper
  • Downloaded 1,506 times
  • Download rankings, all-time:
    • Site-wide: 11,370
    • In cancer biology: 228
  • Year to date:
    • Site-wide: 74,566
  • Since beginning of last month:
    • Site-wide: 56,933

Genomic footprints of activated telomere maintenance mechanisms in cancer

genomics more details view paper
  • Downloaded 1,464 times
  • Download rankings, all-time:
    • Site-wide: 11,847
    • In genomics: 1,289
  • Year to date:
    • Site-wide: 94,421
  • Since beginning of last month:
    • Site-wide: 78,596

ACEseq - allele specific copy number estimation from whole genome sequencing

bioinformatics more details view paper
  • Downloaded 1,367 times
  • Download rankings, all-time:
    • Site-wide: 13,172
    • In bioinformatics: 1,598
  • Year to date:
    • Site-wide: 35,835
  • Since beginning of last month:
    • Site-wide: 23,102

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

bioinformatics more details view paper
  • Downloaded 1,152 times
  • Download rankings, all-time:
    • Site-wide: 17,076
    • In bioinformatics: 2,058
  • Year to date:
    • Site-wide: 19,908
  • Since beginning of last month:
    • Site-wide: 30,530

Single-cell analysis of patient-derived PDAC organoids reveals cell state heterogeneity and a conserved developmental hierarchy

cancer biology more details view paper
  • Downloaded 1,102 times
  • Download rankings, all-time:
    • Site-wide: 18,207
    • In cancer biology: 419
  • Year to date:
    • Site-wide: 3,423
  • Since beginning of last month:
    • Site-wide: 3,163

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 1,078 times
  • Download rankings, all-time:
    • Site-wide: 18,823
    • In genomics: 1,905
  • Year to date:
    • Site-wide: 126,582
  • Since beginning of last month:
    • Site-wide: 112,565

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

cancer biology more details view paper
  • Downloaded 948 times
  • Download rankings, all-time:
    • Site-wide: 22,648
    • In cancer biology: 551
  • Year to date:
    • Site-wide: 105,405
  • Since beginning of last month:
    • Site-wide: 95,670

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

synthetic biology more details view paper
  • Downloaded 903 times
  • Download rankings, all-time:
    • Site-wide: 24,356
    • In synthetic biology: 316
  • Year to date:
    • Site-wide: 67,414
  • Since beginning of last month:
    • Site-wide: 66,826

Web-based design and analysis tools for CRISPR base editing

bioinformatics more details view paper
  • Downloaded 862 times
  • Download rankings, all-time:
    • Site-wide: 25,947
    • In bioinformatics: 3,044
  • Year to date:
    • Site-wide: 106,505
  • Since beginning of last month:
    • Site-wide: 85,944

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

synthetic biology more details view paper
  • Downloaded 741 times
  • Download rankings, all-time:
    • Site-wide: 32,089
    • In synthetic biology: 414
  • Year to date:
    • Site-wide: 87,500
  • Since beginning of last month:
    • Site-wide: 87,669

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

bioinformatics more details view paper
  • Downloaded 725 times
  • Download rankings, all-time:
    • Site-wide: 33,061
    • In bioinformatics: 3,710
  • Year to date:
    • Site-wide: 103,432
  • Since beginning of last month:
    • Site-wide: 110,391

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

immunology more details view paper
  • Downloaded 689 times
  • Download rankings, all-time:
    • Site-wide: 35,435
    • In immunology: 1,008
  • Year to date:
    • Site-wide: 55,965
  • Since beginning of last month:
    • Site-wide: 48,917

Optogenetic control of Neisseria meningitidis Cas9 genome editing using an engineered, light-switchable anti-CRISPR protein

synthetic biology more details view paper
  • Downloaded 637 times
  • Download rankings, all-time:
    • Site-wide: 39,268
    • In synthetic biology: 497
  • Year to date:
    • Site-wide: 72,629
  • Since beginning of last month:
    • Site-wide: 99,718

Impact of cancer mutational signatures on transcription factor motifs in the human genome

bioinformatics more details view paper
  • Downloaded 631 times
  • Download rankings, all-time:
    • Site-wide: 39,778
    • In bioinformatics: 4,324
  • Year to date:
    • Site-wide: 106,736
  • Since beginning of last month:
    • Site-wide: 118,423

The COVID-19 PHARMACOME: A method for the rational selection of drug repurposing candidates from multimodal knowledge harmonization

bioinformatics more details view paper
  • Downloaded 489 times
  • Download rankings, all-time:
    • Site-wide: 54,240
    • In bioinformatics: 5,507
  • Year to date:
    • Site-wide: 25,570
  • Since beginning of last month:
    • Site-wide: 32,165

Automated screening by 3D light-sheet microscopy with high spatial and temporal resolution reveals mitotic phenotypes

cell biology more details view paper
  • Downloaded 469 times
  • Download rankings, all-time:
    • Site-wide: 56,710
    • In cell biology: 2,474
  • Year to date:
    • Site-wide: 108,014
  • Since beginning of last month:
    • Site-wide: 100,620

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

systems biology more details view paper
  • Downloaded 398 times
  • Download rankings, all-time:
    • Site-wide: 67,127
    • In systems biology: 1,618
  • Year to date:
    • Site-wide: 128,364
  • Since beginning of last month:
    • Site-wide: 126,398

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

bioinformatics more details view paper
  • Downloaded 380 times
  • Download rankings, all-time:
    • Site-wide: 70,011
    • In bioinformatics: 6,683
  • Year to date:
    • Site-wide: 101,025
  • Since beginning of last month:
    • Site-wide: 96,385

Delayed viral clearance and exacerbated airway hyperinflammation in hypertensive COVID-19 patients

infectious diseases more details view paper
  • Downloaded 349 times
  • Download rankings, all-time:
    • Site-wide: 75,420
    • In infectious diseases: 3,224
  • Year to date:
    • Site-wide: 38,713
  • Since beginning of last month:
    • Site-wide: 38,065

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

genomics more details view paper
  • Downloaded 284 times
  • Download rankings, all-time:
    • Site-wide: 88,658
    • In genomics: 5,586
  • Year to date:
    • Site-wide: 118,348
  • Since beginning of last month:
    • Site-wide: 126,381

Induced aneuploidy disrupts MCF10A acini formation and CCND1 expression

cancer biology more details view paper
  • Downloaded 206 times
  • Download rankings, all-time:
    • Site-wide: 105,798
    • In cancer biology: 3,231
  • Year to date:
    • Site-wide: 100,229
  • Since beginning of last month:
    • Site-wide: 83,667

The DNA methylation landscape of multiple myeloma shows extensive inter- and intrapatient heterogeneity that fuels transcriptomic variability

cancer biology more details view paper
  • Downloaded 179 times
  • Download rankings, all-time:
    • Site-wide: 111,683
    • In cancer biology: 3,431
  • Year to date:
    • Site-wide: 48,366
  • Since beginning of last month:
    • Site-wide: 40,313

Integrative Ranking Of Enhancer Networks Facilitates The Discovery Of Epigenetic Markers In Cancer

bioinformatics more details view paper
  • Downloaded 75 times
  • Download rankings, all-time:
    • Site-wide: 131,180
    • In bioinformatics: 10,315
  • Year to date:
    • Site-wide: 117,015
  • Since beginning of last month:
    • Site-wide: 94,663

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News