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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,230 bioRxiv papers from 306,630 authors.

Author: Roland Eils

Rankings

  • All-time downloads: 37,352 (rank: 467 out of 306,635)
  • Categories:
    • bioinformatics: 4,620 (rank: 1,488 (tie) out of 26,738)
    • cancer biology: 3,542 (rank: 428 out of 19,860)
    • cell biology: 11,841 (rank: 163 (tie) out of 21,165)
    • genomics: 15,082 (rank: 510 out of 34,692)
    • immunology: 489 (rank: 4,828 (tie) out of 14,632)
    • synthetic biology: 1,499 (rank: 492 (tie) out of 3,070)
    • systems biology: 279 (rank: 6,807 (tie) out of 9,233)

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,841 times
  • Download rankings, all-time:
    • Site-wide: 90 out of 70,230
    • In cell biology: 3 out of 3,429
  • Year to date:
    • Site-wide: 8,324 out of 70,230
  • Since beginning of last month:
    • Site-wide: 8,301 out of 70,230

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,311 times
  • Download rankings, all-time:
    • Site-wide: 1,985 out of 70,230
    • In genomics: 428 out of 4,700
  • Year to date:
    • Site-wide: 53,606 out of 70,230
  • Since beginning of last month:
    • Site-wide: 39,034 out of 70,230

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

genomics more details view paper
  • Downloaded 2,305 times
  • Download rankings, all-time:
    • Site-wide: 1,992 out of 70,230
    • In genomics: 429 out of 4,700
  • Year to date:
    • Site-wide: 10,031 out of 70,230
  • Since beginning of last month:
    • Site-wide: 20,600 out of 70,230

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,017 times
  • Download rankings, all-time:
    • Site-wide: 2,514 out of 70,230
    • In genomics: 521 out of 4,700
  • Year to date:
    • Site-wide: 26,059 out of 70,230
  • Since beginning of last month:
    • Site-wide: 40,580 out of 70,230

Large-Scale Uniform Analysis of Cancer Whole Genomes in Multiple Computing Environments

genomics more details view paper
  • Downloaded 1,987 times
  • Download rankings, all-time:
    • Site-wide: 2,580 out of 70,230
    • In genomics: 533 out of 4,700
  • Year to date:
    • Site-wide: 6,958 out of 70,230
  • Since beginning of last month:
    • Site-wide: 29,223 out of 70,230

The landscape of viral associations in human cancers

cancer biology more details view paper
  • Downloaded 1,582 times
  • Download rankings, all-time:
    • Site-wide: 3,795 out of 70,230
    • In cancer biology: 94 out of 2,389
  • Year to date:
    • Site-wide: 4,853 out of 70,230
  • Since beginning of last month:
    • Site-wide: 4,678 out of 70,230

pheno-seq - linking morphological features to gene expression in 3D cell culture systems

genomics more details view paper
  • Downloaded 1,527 times
  • Download rankings, all-time:
    • Site-wide: 4,055 out of 70,230
    • In genomics: 732 out of 4,700
  • Year to date:
    • Site-wide: 53,742 out of 70,230
  • Since beginning of last month:
    • Site-wide: 23,972 out of 70,230

Single nucleus RNA sequencing maps acinar cell states in a human pancreas cell atlas

genomics more details view paper
  • Downloaded 1,317 times
  • Download rankings, all-time:
    • Site-wide: 5,175 out of 70,230
    • In genomics: 897 out of 4,700
  • Year to date:
    • Site-wide: 3,327 out of 70,230
  • Since beginning of last month:
    • Site-wide: 1,314 out of 70,230

Deciphering programs of transcriptional regulation by combined deconvolution of multiple omics layers

genomics more details view paper
  • Downloaded 1,317 times
  • Download rankings, all-time:
    • Site-wide: 5,173 out of 70,230
    • In genomics: 900 out of 4,700
  • Year to date:
    • Site-wide: 10,965 out of 70,230
  • Since beginning of last month:
    • Site-wide: 9,985 out of 70,230

Genomic footprints of activated telomere maintenance mechanisms in cancer

genomics more details view paper
  • Downloaded 1,202 times
  • Download rankings, all-time:
    • Site-wide: 6,046 out of 70,230
    • In genomics: 1,006 out of 4,700
  • Year to date:
    • Site-wide: 4,119 out of 70,230
  • Since beginning of last month:
    • Site-wide: 41,723 out of 70,230

Modeling glioblastoma invasion using human brain organoids and single-cell transcriptomics

cancer biology more details view paper
  • Downloaded 1,068 times
  • Download rankings, all-time:
    • Site-wide: 7,350 out of 70,230
    • In cancer biology: 192 out of 2,389
  • Year to date:
    • Site-wide: 25,685 out of 70,230
  • Since beginning of last month:
    • Site-wide: 3,950 out of 70,230

ACEseq - allele specific copy number estimation from whole genome sequencing

bioinformatics more details view paper
  • Downloaded 1,024 times
  • Download rankings, all-time:
    • Site-wide: 7,870 out of 70,230
    • In bioinformatics: 1,393 out of 6,887
  • Year to date:
    • Site-wide: 13,945 out of 70,230
  • Since beginning of last month:
    • Site-wide: 41,848 out of 70,230

Segmentation-free inference of cell-types from in situ transcriptomics data

bioinformatics more details view paper
  • Downloaded 915 times
  • Download rankings, all-time:
    • Site-wide: 9,445 out of 70,230
    • In bioinformatics: 1,632 out of 6,887
  • Year to date:
    • Site-wide: 60,180 out of 70,230
  • Since beginning of last month:
    • Site-wide: 4,401 out of 70,230

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 901 times
  • Download rankings, all-time:
    • Site-wide: 9,655 out of 70,230
    • In genomics: 1,441 out of 4,700
  • Year to date:
    • Site-wide: 28,858 out of 70,230
  • Since beginning of last month:
    • Site-wide: 63,581 out of 70,230

Resolving Drug Effects In Patient-Derived Cancer Cells Links Organoid Responses To Genome Alterations

cancer biology more details view paper
  • Downloaded 807 times
  • Download rankings, all-time:
    • Site-wide: 11,524 out of 70,230
    • In cancer biology: 340 out of 2,389
  • Year to date:
    • Site-wide: 58,056 out of 70,230
  • Since beginning of last month:
    • Site-wide: 61,677 out of 70,230

Web-based design and analysis tools for CRISPR base editing

bioinformatics more details view paper
  • Downloaded 721 times
  • Download rankings, all-time:
    • Site-wide: 13,556 out of 70,230
    • In bioinformatics: 2,200 out of 6,887
  • Year to date:
    • Site-wide: 32,449 out of 70,230
  • Since beginning of last month:
    • Site-wide: 37,698 out of 70,230

Cell-specific CRISPR/Cas9 activation by microRNA-dependent expression of anti-CRISPR proteins

synthetic biology more details view paper
  • Downloaded 714 times
  • Download rankings, all-time:
    • Site-wide: 13,752 out of 70,230
    • In synthetic biology: 224 out of 666
  • Year to date:
    • Site-wide: 66,875 out of 70,230
  • Since beginning of last month:
    • Site-wide: 41,091 out of 70,230

Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders

bioinformatics more details view paper
  • Downloaded 612 times
  • Download rankings, all-time:
    • Site-wide: 17,112 out of 70,230
    • In bioinformatics: 2,623 out of 6,887
  • Year to date:
    • Site-wide: 34,209 out of 70,230
  • Since beginning of last month:
    • Site-wide: 7,175 out of 70,230

Identification and prioritisation of causal variants in human genetic disorders from exome or whole genome sequencing data

bioinformatics more details view paper
  • Downloaded 560 times
  • Download rankings, all-time:
    • Site-wide: 19,333 out of 70,230
    • In bioinformatics: 2,886 out of 6,887
  • Year to date:
    • Site-wide: 20,169 out of 70,230
  • Since beginning of last month:
    • Site-wide: 67,594 out of 70,230

Impact of cancer mutational signatures on transcription factor motifs in the human genome

bioinformatics more details view paper
  • Downloaded 519 times
  • Download rankings, all-time:
    • Site-wide: 21,363 out of 70,230
    • In bioinformatics: 3,084 out of 6,887
  • Year to date:
    • Site-wide: 66,108 out of 70,230
  • Since beginning of last month:
    • Site-wide: 59,341 out of 70,230

Computational design of anti-CRISPR proteins with improved inhibition potency and expanded specificity

synthetic biology more details view paper
  • Downloaded 502 times
  • Download rankings, all-time:
    • Site-wide: 22,264 out of 70,230
    • In synthetic biology: 351 out of 666
  • Year to date:
    • Site-wide: 17,644 out of 70,230
  • Since beginning of last month:
    • Site-wide: 8,454 out of 70,230

Single-fluorescent protein reporters allow parallel quantification of NK cell-mediated granzyme and caspase activities in single target cells

immunology more details view paper
  • Downloaded 489 times
  • Download rankings, all-time:
    • Site-wide: 23,004 out of 70,230
    • In immunology: 437 out of 1,805
  • Year to date:
    • Site-wide: 37,057 out of 70,230
  • Since beginning of last month:
    • Site-wide: 29,570 out of 70,230

Optogenetic control of Neisseria meningitidis Cas9 genome editing using an engineered, light-switchable anti-CRISPR protein

synthetic biology more details view paper
  • Downloaded 283 times
  • Download rankings, all-time:
    • Site-wide: 40,306 out of 70,230
    • In synthetic biology: 544 out of 666
  • Year to date:
    • Site-wide: 7,009 out of 70,230
  • Since beginning of last month:
    • Site-wide: 575 out of 70,230

Unraveling mitotic protein networks by 3D multiplexed epitope drug screening

systems biology more details view paper
  • Downloaded 279 times
  • Download rankings, all-time:
    • Site-wide: 40,819 out of 70,230
    • In systems biology: 1,247 out of 1,936
  • Year to date:
    • Site-wide: 21,958 out of 70,230
  • Since beginning of last month:
    • Site-wide: 47,787 out of 70,230

HTSlib-js: Developer toolkit for a client-side JavaScript interface for HTSlib

bioinformatics more details view paper
  • Downloaded 269 times
  • Download rankings, all-time:
    • Site-wide: 42,042 out of 70,230
    • In bioinformatics: 4,934 out of 6,887
  • Year to date:
    • Site-wide: 62,904 out of 70,230
  • Since beginning of last month:
    • Site-wide: 46,077 out of 70,230

Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the human AML cell line HL-60/S4

genomics more details view paper
  • Downloaded 198 times
  • Download rankings, all-time:
    • Site-wide: 51,378 out of 70,230
    • In genomics: 4,081 out of 4,700
  • Year to date:
    • Site-wide: 24,591 out of 70,230
  • Since beginning of last month:
    • Site-wide: 53,883 out of 70,230

Induced aneuploidy disrupts MCF10A acini formation and CCND1 expression

cancer biology more details view paper
  • Downloaded 85 times
  • Download rankings, all-time:
    • Site-wide: 66,941 out of 70,230
    • In cancer biology: 2,238 out of 2,389
  • Year to date:
    • Site-wide: 23,942 out of 70,230
  • Since beginning of last month:
    • Site-wide: 3,462 out of 70,230

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