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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,113 bioRxiv papers from 295,324 authors.

Author: Bo Li

Rankings

  • All-time downloads: 34,698 (rank: 493 out of 295,364)
  • Categories:
    • bioinformatics: 15,825 (rank: 127 out of 25,734)
    • cancer biology: 759 (rank: 4,511 (tie) out of 18,701)
    • developmental biology: 2,458 (rank: 290 (tie) out of 11,146)
    • genetics: 447 (rank: 17,768 (tie) out of 29,454)
    • genomics: 8,620 (rank: 1,293 out of 33,640)
    • immunology: 1,451 (rank: 924 (tie) out of 13,871)
    • microbiology: 74 (rank: 29,321 (tie) out of 30,515)
    • molecular biology: 114 (rank: 12,808 (tie) out of 14,193)
    • neuroscience: 4,660 (rank: 1,391 out of 49,499)
    • systems biology: 290 (rank: 6,285 (tie) out of 8,910)

Downloads per author, site-wide

Preprints

STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq

bioinformatics more details view paper
  • Downloaded 6,119 times
  • Download rankings, all-time:
    • Site-wide: 309 out of 67,113
    • In bioinformatics: 54 out of 6,620
  • Year to date:
    • Site-wide: 785 out of 67,113
  • Since beginning of last month:
    • Site-wide: 2,047 out of 67,113

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

genomics more details view paper
  • Downloaded 3,452 times
  • Download rankings, all-time:
    • Site-wide: 903 out of 67,113
    • In genomics: 234 out of 4,561
  • Year to date:
    • Site-wide: 368 out of 67,113
  • Since beginning of last month:
    • Site-wide: 4,469 out of 67,113

Evaluation of de novo transcriptome assemblies from RNA-Seq data

bioinformatics more details view paper
  • Downloaded 2,974 times
  • Download rankings, all-time:
    • Site-wide: 1,194 out of 67,113
    • In bioinformatics: 237 out of 6,620
  • Year to date:
    • Site-wide: 50,979 out of 67,113
  • Since beginning of last month:
    • Site-wide: 46,164 out of 67,113

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

genomics more details view paper
  • Downloaded 2,782 times
  • Download rankings, all-time:
    • Site-wide: 1,347 out of 67,113
    • In genomics: 307 out of 4,561
  • Year to date:
    • Site-wide: 272 out of 67,113
  • Since beginning of last month:
    • Site-wide: 104 out of 67,113

Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

developmental biology more details view paper
  • Downloaded 2,458 times
  • Download rankings, all-time:
    • Site-wide: 1,681 out of 67,113
    • In developmental biology: 20 out of 1,992
  • Year to date:
    • Site-wide: 355 out of 67,113
  • Since beginning of last month:
    • Site-wide: 1,415 out of 67,113

Transcriptome Deconvolution of Heterogeneous Tumor Samples with Immune Infiltration

bioinformatics more details view paper
  • Downloaded 2,108 times
  • Download rankings, all-time:
    • Site-wide: 2,225 out of 67,113
    • In bioinformatics: 457 out of 6,620
  • Year to date:
    • Site-wide: 19,410 out of 67,113
  • Since beginning of last month:
    • Site-wide: 52,130 out of 67,113

The central amygdala controls learning in the lateral amygdala

neuroscience more details view paper
  • Downloaded 1,532 times
  • Download rankings, all-time:
    • Site-wide: 3,812 out of 67,113
    • In neuroscience: 600 out of 12,032
  • Year to date:
    • Site-wide: 28,497 out of 67,113
  • Since beginning of last month:
    • Site-wide: 36,646 out of 67,113

Ultrasensitive detection of TCR hypervariable region in solid-tissue RNA-seq data

bioinformatics more details view paper
  • Downloaded 1,376 times
  • Download rankings, all-time:
    • Site-wide: 4,576 out of 67,113
    • In bioinformatics: 889 out of 6,620
  • Year to date:
    • Site-wide: 24,025 out of 67,113
  • Since beginning of last month:
    • Site-wide: 26,406 out of 67,113

The landscape of antigen-specific T cells in human cancers

bioinformatics more details view paper
  • Downloaded 1,360 times
  • Download rankings, all-time:
    • Site-wide: 4,660 out of 67,113
    • In bioinformatics: 904 out of 6,620
  • Year to date:
    • Site-wide: 1,836 out of 67,113
  • Since beginning of last month:
    • Site-wide: 2,634 out of 67,113

A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets

immunology more details view paper
  • Downloaded 939 times
  • Download rankings, all-time:
    • Site-wide: 8,588 out of 67,113
    • In immunology: 140 out of 1,707
  • Year to date:
    • Site-wide: 2,164 out of 67,113
  • Since beginning of last month:
    • Site-wide: 2,589 out of 67,113

Comparative analysis of sequencing technologies platforms for single-cell transcriptomics

genomics more details view paper
  • Downloaded 924 times
  • Download rankings, all-time:
    • Site-wide: 8,774 out of 67,113
    • In genomics: 1,348 out of 4,561
  • Year to date:
    • Site-wide: 6,457 out of 67,113
  • Since beginning of last month:
    • Site-wide: 44,679 out of 67,113

Prober: A general toolkit for analyzing sequencing-based 'toeprinting' assays

genomics more details view paper
  • Downloaded 884 times
  • Download rankings, all-time:
    • Site-wide: 9,388 out of 67,113
    • In genomics: 1,418 out of 4,561
  • Year to date:
    • Site-wide: 52,836 out of 67,113
  • Since beginning of last month:
    • Site-wide: 40,126 out of 67,113

Parvalbumin interneuron dysfunction in a thalamus - prefrontal cortex circuit in Disc1 deficiency mice

neuroscience more details view paper
  • Downloaded 862 times
  • Download rankings, all-time:
    • Site-wide: 9,792 out of 67,113
    • In neuroscience: 1,545 out of 12,032
  • Year to date:
    • Site-wide: 37,194 out of 67,113
  • Since beginning of last month:
    • Site-wide: 34,377 out of 67,113

An insula-central amygdala circuit for behavioral inhibition

neuroscience more details view paper
  • Downloaded 849 times
  • Download rankings, all-time:
    • Site-wide: 9,998 out of 67,113
    • In neuroscience: 1,584 out of 12,032
  • Year to date:
    • Site-wide: 26,779 out of 67,113
  • Since beginning of last month:
    • Site-wide: 28,166 out of 67,113

Opposing contributions of GABAergic and glutamatergic ventral pallidal neurons to motivational behaviours

neuroscience more details view paper
  • Downloaded 747 times
  • Download rankings, all-time:
    • Site-wide: 12,150 out of 67,113
    • In neuroscience: 1,972 out of 12,032
  • Year to date:
    • Site-wide: 3,243 out of 67,113
  • Since beginning of last month:
    • Site-wide: 7,014 out of 67,113

Population coding of valence in the basolateral amygdala

neuroscience more details view paper
  • Downloaded 670 times
  • Download rankings, all-time:
    • Site-wide: 14,196 out of 67,113
    • In neuroscience: 2,346 out of 12,032
  • Year to date:
    • Site-wide: 47,019 out of 67,113
  • Since beginning of last month:
    • Site-wide: 55,305 out of 67,113

EPIC: MHC-I epitope prediction integrating mass spectrometry derived motifs and tissue-specific expression profiles

bioinformatics more details view paper
  • Downloaded 608 times
  • Download rankings, all-time:
    • Site-wide: 16,252 out of 67,113
    • In bioinformatics: 2,528 out of 6,620
  • Year to date:
    • Site-wide: 4,581 out of 67,113
  • Since beginning of last month:
    • Site-wide: 8,015 out of 67,113

RNA polymerase mapping in plants identifies enhancers enriched in causal variants

genomics more details view paper
  • Downloaded 578 times
  • Download rankings, all-time:
    • Site-wide: 17,425 out of 67,113
    • In genomics: 2,136 out of 4,561
  • Year to date:
    • Site-wide: 12,171 out of 67,113
  • Since beginning of last month:
    • Site-wide: 25,756 out of 67,113

Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq

bioinformatics more details view paper
  • Downloaded 478 times
  • Download rankings, all-time:
    • Site-wide: 22,250 out of 67,113
    • In bioinformatics: 3,187 out of 6,620
  • Year to date:
    • Site-wide: 6,886 out of 67,113
  • Since beginning of last month:
    • Site-wide: 389 out of 67,113

DNA methylation-based immune cell deconvolution in solid tumors

bioinformatics more details view paper
  • Downloaded 451 times
  • Download rankings, all-time:
    • Site-wide: 23,837 out of 67,113
    • In bioinformatics: 3,345 out of 6,620
  • Year to date:
    • Site-wide: 7,593 out of 67,113
  • Since beginning of last month:
    • Site-wide: 8,381 out of 67,113

Genetic predisposition to myeloproliferative neoplasms implicates hematopoietic stem cell biology

genetics more details view paper
  • Downloaded 447 times
  • Download rankings, all-time:
    • Site-wide: 24,075 out of 67,113
    • In genetics: 1,587 out of 3,775
  • Year to date:
    • Site-wide: 7,713 out of 67,113
  • Since beginning of last month:
    • Site-wide: 4,306 out of 67,113

The common neoantigens in colorectal cancer are predicted and validated to be presented or immunogenic

immunology more details view paper
  • Downloaded 405 times
  • Download rankings, all-time:
    • Site-wide: 26,892 out of 67,113
    • In immunology: 519 out of 1,707
  • Year to date:
    • Site-wide: 9,091 out of 67,113
  • Since beginning of last month:
    • Site-wide: 5,601 out of 67,113

Identification of Cancer-associated Metabolic Vulnerabilities by Modeling Multi-objective Optimality in Metabolism

systems biology more details view paper
  • Downloaded 290 times
  • Download rankings, all-time:
    • Site-wide: 37,114 out of 67,113
    • In systems biology: 1,148 out of 1,863
  • Year to date:
    • Site-wide: 61,990 out of 67,113
  • Since beginning of last month:
    • Site-wide: 56,471 out of 67,113

Novel pipeline of high-frequency neoantigens heathy donor-based validation in breast cancer

cancer biology more details view paper
  • Downloaded 264 times
  • Download rankings, all-time:
    • Site-wide: 40,075 out of 67,113
    • In cancer biology: 1,234 out of 2,264
  • Year to date:
    • Site-wide: 17,545 out of 67,113
  • Since beginning of last month:
    • Site-wide: 10,465 out of 67,113

Molecular profiles and mutation burden analysis in Chinese patients with gastric carcinoma

cancer biology more details view paper
  • Downloaded 262 times
  • Download rankings, all-time:
    • Site-wide: 40,229 out of 67,113
    • In cancer biology: 1,245 out of 2,264
  • Year to date:
    • Site-wide: 26,520 out of 67,113
  • Since beginning of last month:
    • Site-wide: 28,779 out of 67,113

Bi-clustering based biological and clinical characterization of colorectal cancer in complementary to CMS classification

bioinformatics more details view paper
  • Downloaded 201 times
  • Download rankings, all-time:
    • Site-wide: 48,073 out of 67,113
    • In bioinformatics: 5,362 out of 6,620
  • Year to date:
    • Site-wide: 26,235 out of 67,113
  • Since beginning of last month:
    • Site-wide: 32,069 out of 67,113

Verify Hub Genes of expression profile in aortic dissection

bioinformatics more details view paper
  • Downloaded 150 times
  • Download rankings, all-time:
    • Site-wide: 55,375 out of 67,113
    • In bioinformatics: 5,894 out of 6,620
  • Year to date:
    • Site-wide: 34,588 out of 67,113
  • Since beginning of last month:
    • Site-wide: 43,202 out of 67,113

Molecular profiling of lymphovascular invasive cancer cells in TNBC using G&T-seq

cancer biology more details view paper
  • Downloaded 136 times
  • Download rankings, all-time:
    • Site-wide: 57,324 out of 67,113
    • In cancer biology: 1,835 out of 2,264
  • Year to date:
    • Site-wide: 38,047 out of 67,113
  • Since beginning of last month:
    • Site-wide: 11,688 out of 67,113

RecO impedes RecG-SSB binding to impair the strand annealing recombination pathway in E.coli

molecular biology more details view paper
  • Downloaded 114 times
  • Download rankings, all-time:
    • Site-wide: 60,206 out of 67,113
    • In molecular biology: 1,884 out of 2,139
  • Year to date:
    • Site-wide: 43,963 out of 67,113
  • Since beginning of last month:
    • Site-wide: 35,616 out of 67,113

The co-stimulation of anti-CD28 and IL-2 enhances the sensitivity of ELISPOT assays for detection of neoantigen-specific T cells in PBMC

immunology more details view paper
  • Downloaded 107 times
  • Download rankings, all-time:
    • Site-wide: 61,075 out of 67,113
    • In immunology: 1,518 out of 1,707
  • Year to date:
    • Site-wide: 46,163 out of 67,113
  • Since beginning of last month:
    • Site-wide: 26,663 out of 67,113

Recurrent Neoantigens in Colorectal Cancer as Potential Immunotherapy Targets

cancer biology more details view paper
  • Downloaded 97 times
  • Download rankings, all-time:
    • Site-wide: 62,176 out of 67,113
    • In cancer biology: 2,034 out of 2,264
  • Year to date:
    • Site-wide: 49,686 out of 67,113
  • Since beginning of last month:
    • Site-wide: 2,663 out of 67,113

Structural changes in the gut microbiome of short-term and long-term medical workers compared to normal controls

microbiology more details view paper
  • Downloaded 74 times
  • Download rankings, all-time:
    • Site-wide: 64,359 out of 67,113
    • In microbiology: 5,080 out of 5,414
  • Year to date:
    • Site-wide: 57,718 out of 67,113
  • Since beginning of last month:
    • Site-wide: 26,070 out of 67,113

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