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Author: Anthony Gitter

Rankings

  • All-time downloads: 59,720 (rank: 557 out of 363,737)
  • Categories:
    • biochemistry: 931 (rank: 2,571 (tie) out of 16,146)
    • bioinformatics: 57,944 (rank: 17 out of 31,459)
    • pharmacology and toxicology: 415 (rank: 1,609 (tie) out of 4,786)
    • systems biology: 430 (rank: 6,337 (tie) out of 10,828)

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Preprints

Opportunities And Obstacles For Deep Learning In Biology And Medicine

bioinformatics more details view paper
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  • Download rankings, all-time:
    • Site-wide: 20 out of 84,502
    • In bioinformatics: 3 out of 8,105
  • Year to date:
    • Site-wide: 701 out of 84,502
  • Since beginning of last month:
    • Site-wide: 791 out of 84,502

Network Inference with Granger Causality Ensembles on Single-Cell Transcriptomic Data

bioinformatics more details view paper
  • Downloaded 1,724 times
  • Download rankings, all-time:
    • Site-wide: 4,365 out of 84,502
    • In bioinformatics: 824 out of 8,105
  • Year to date:
    • Site-wide: 5,662 out of 84,502
  • Since beginning of last month:
    • Site-wide: 5,564 out of 84,502

Learning Drug Function from Chemical Structure with Convolutional Neural Networks and Random Forests

bioinformatics more details view paper
  • Downloaded 1,405 times
  • Download rankings, all-time:
    • Site-wide: 6,118 out of 84,502
    • In bioinformatics: 1,093 out of 8,105
  • Year to date:
    • Site-wide: 13,117 out of 84,502
  • Since beginning of last month:
    • Site-wide: 28,176 out of 84,502

Practical model selection for prospective virtual screening

biochemistry more details view paper
  • Downloaded 931 times
  • Download rankings, all-time:
    • Site-wide: 12,041 out of 84,502
    • In biochemistry: 267 out of 2,744
  • Year to date:
    • Site-wide: 30,931 out of 84,502
  • Since beginning of last month:
    • Site-wide: 38,244 out of 84,502

Lag Penalized Weighted Correlation for Time Series Clustering

bioinformatics more details view paper
  • Downloaded 751 times
  • Download rankings, all-time:
    • Site-wide: 16,772 out of 84,502
    • In bioinformatics: 2,561 out of 8,105
  • Year to date:
    • Site-wide: 53,627 out of 84,502
  • Since beginning of last month:
    • Site-wide: 49,392 out of 84,502

Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data

bioinformatics more details view paper
  • Downloaded 658 times
  • Download rankings, all-time:
    • Site-wide: 20,372 out of 84,502
    • In bioinformatics: 2,973 out of 8,105
  • Year to date:
    • Site-wide: 78,044 out of 84,502
  • Since beginning of last month:
    • Site-wide: 61,987 out of 84,502

Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response

systems biology more details view paper
  • Downloaded 430 times
  • Download rankings, all-time:
    • Site-wide: 35,172 out of 84,502
    • In systems biology: 1,016 out of 2,230
  • Year to date:
    • Site-wide: 79,594 out of 84,502
  • Since beginning of last month:
    • Site-wide: 68,829 out of 84,502

Predicting kinase inhibitors using bioactivity matrix derived informer sets

pharmacology and toxicology more details view paper
  • Downloaded 415 times
  • Download rankings, all-time:
    • Site-wide: 36,592 out of 84,502
    • In pharmacology and toxicology: 216 out of 759
  • Year to date:
    • Site-wide: 61,223 out of 84,502
  • Since beginning of last month:
    • Site-wide: 46,640 out of 84,502

Classifying T cell activity in autofluorescence intensity images with convolutional neural networks

bioinformatics more details view paper
  • Downloaded 347 times
  • Download rankings, all-time:
    • Site-wide: 43,946 out of 84,502
    • In bioinformatics: 5,191 out of 8,105
  • Year to date:
    • Site-wide: 31,534 out of 84,502
  • Since beginning of last month:
    • Site-wide: 20,518 out of 84,502

Automating parameter selection to avoid implausible biological pathway models

bioinformatics more details view paper
  • Downloaded 290 times
  • Download rankings, all-time:
    • Site-wide: 51,413 out of 84,502
    • In bioinformatics: 5,773 out of 8,105
  • Year to date:
    • Site-wide: 15,794 out of 84,502
  • Since beginning of last month:
    • Site-wide: 14,659 out of 84,502

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