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Author: Anne E. Carpenter

Rankings

  • All-time downloads: 85,985 (rank: 439 out of 423,760)
  • Categories:
    • bioinformatics: 78,840 (rank: 7 out of 35,792)
    • immunology: 2,650 (rank: 1,678 (tie) out of 25,798)
    • neuroscience: 344 (rank: 43,841 (tie) out of 71,427)
    • systems biology: 4,151 (rank: 652 (tie) out of 12,229)

Downloads per author, site-wide

Preprints

Opportunities And Obstacles For Deep Learning In Biology And Medicine

bioinformatics more details view paper
  • Downloaded 53,563 times
  • Download rankings, all-time:
    • Site-wide: 21 out of 100,173
    • In bioinformatics: 3 out of 9,208
  • Year to date:
    • Site-wide: 686 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Evaluation of Deep Learning Strategies for Nucleus Segmentation in Fluorescence Images

bioinformatics more details view paper
  • Downloaded 5,995 times
  • Download rankings, all-time:
    • Site-wide: 600 out of 100,173
    • In bioinformatics: 89 out of 9,208
  • Year to date:
    • Site-wide: 2,124 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Reconstructing cell cycle and disease progression using deep learning

bioinformatics more details view paper
  • Downloaded 5,866 times
  • Download rankings, all-time:
    • Site-wide: 618 out of 100,173
    • In bioinformatics: 92 out of 9,208
  • Year to date:
    • Site-wide: 7,489 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

A deep learning framework for nucleus segmentation using image style transfer

bioinformatics more details view paper
  • Downloaded 4,310 times
  • Download rankings, all-time:
    • Site-wide: 1,071 out of 100,173
    • In bioinformatics: 179 out of 9,208
  • Year to date:
    • Site-wide: 1,397 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes

systems biology more details view paper
  • Downloaded 3,261 times
  • Download rankings, all-time:
    • Site-wide: 1,734 out of 100,173
    • In systems biology: 39 out of 2,549
  • Year to date:
    • Site-wide: 14,421 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

CytoGAN: Generative Modeling of Cell Images

bioinformatics more details view paper
  • Downloaded 3,036 times
  • Download rankings, all-time:
    • Site-wide: 1,970 out of 100,173
    • In bioinformatics: 348 out of 9,208
  • Year to date:
    • Site-wide: 7,506 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Functional immune mapping with deep-learning enabled phenomics applied to immunomodulatory and COVID-19 drug discovery

immunology more details view paper
  • Downloaded 2,650 times
  • Download rankings, all-time:
    • Site-wide: 2,457 out of 100,173
    • In immunology: 77 out of 3,104
  • Year to date:
    • Site-wide: 511 out of 100,173
  • Since beginning of last month:
    • Site-wide: 136 out of 100,173

Automating Morphological Profiling with Generic Deep Convolutional Networks

bioinformatics more details view paper
  • Downloaded 2,629 times
  • Download rankings, all-time:
    • Site-wide: 2,490 out of 100,173
    • In bioinformatics: 436 out of 9,208
  • Year to date:
    • Site-wide: 9,972 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Weakly supervised learning of single-cell feature embeddings

bioinformatics more details view paper
  • Downloaded 2,074 times
  • Download rankings, all-time:
    • Site-wide: 3,695 out of 100,173
    • In bioinformatics: 663 out of 9,208
  • Year to date:
    • Site-wide: 32,418 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Systematic morphological profiling of human gene and allele function reveals Hippo-NF-κB pathway connectivity

systems biology more details view paper
  • Downloaded 890 times
  • Download rankings, all-time:
    • Site-wide: 14,945 out of 100,173
    • In systems biology: 402 out of 2,549
  • Year to date:
    • Site-wide: 48,507 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Capturing single-cell heterogeneity via data fusion improves image-based profiling

bioinformatics more details view paper
  • Downloaded 878 times
  • Download rankings, all-time:
    • Site-wide: 15,264 out of 100,173
    • In bioinformatics: 2,341 out of 9,208
  • Year to date:
    • Site-wide: 81,241 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Molecular diversity of glutamatergic and GABAergic synapses from multiplexed fluorescence imaging

neuroscience more details view paper
  • Downloaded 344 times
  • Download rankings, all-time:
    • Site-wide: 50,850 out of 100,173
    • In neuroscience: 8,937 out of 17,827
  • Year to date:
    • Site-wide: 10,431 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

Predicting cell health phenotypes using image-based morphology profiling

bioinformatics more details view paper
  • Downloaded 310 times
  • Download rankings, all-time:
    • Site-wide: 55,838 out of 100,173
    • In bioinformatics: 6,188 out of 9,208
  • Year to date:
    • Site-wide: 12,219 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

On the correlation between material-induced cell shape and phenotypical response of human mesenchymal stem cells

bioinformatics more details view paper
  • Downloaded 179 times
  • Download rankings, all-time:
    • Site-wide: 78,257 out of 100,173
    • In bioinformatics: 7,781 out of 9,208
  • Year to date:
    • Site-wide: 26,332 out of 100,173
  • Since beginning of last month:
    • Site-wide: None out of 100,173

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