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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,307 bioRxiv papers from 319,075 authors.

Author: Marta Gut

Rankings

  • All-time downloads: 28,212 (rank: 847 out of 319,220)
  • Categories:
    • bioinformatics: 1,479 (rank: 6,039 (tie) out of 27,656)
    • cancer biology: 284 (rank: 13,238 (tie) out of 20,978)
    • evolutionary biology: 434 (rank: 9,292 (tie) out of 16,956)
    • genetics: 804 (rank: 12,897 (tie) out of 31,249)
    • genomics: 24,791 (rank: 262 out of 35,563)
    • immunology: 420 (rank: 6,359 (tie) out of 15,502)

Downloads per author, site-wide

Preprints

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

genomics more details view paper
  • Downloaded 9,600 times
  • Download rankings, all-time:
    • Site-wide: 154 out of 73,343
    • In genomics: 41 out of 4,869
  • Year to date:
    • Site-wide: 263 out of 73,343
  • Since beginning of last month:
    • Site-wide: 263 out of 73,343

A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

genomics more details view paper
  • Downloaded 2,319 times
  • Download rankings, all-time:
    • Site-wide: 2,093 out of 73,343
    • In genomics: 444 out of 4,869
  • Year to date:
    • Site-wide: 65,965 out of 73,343
  • Since beginning of last month:
    • Site-wide: 66,923 out of 73,343

A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

genomics more details view paper
  • Downloaded 2,028 times
  • Download rankings, all-time:
    • Site-wide: 2,636 out of 73,343
    • In genomics: 537 out of 4,869
  • Year to date:
    • Site-wide: 43,741 out of 73,343
  • Since beginning of last month:
    • Site-wide: 43,735 out of 73,343

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

genomics more details view paper
  • Downloaded 1,556 times
  • Download rankings, all-time:
    • Site-wide: 4,164 out of 73,343
    • In genomics: 743 out of 4,869
  • Year to date:
    • Site-wide: 29,808 out of 73,343
  • Since beginning of last month:
    • Site-wide: 29,808 out of 73,343

GEMBS — high through-put processing for DNA methylation data from Whole Genome Bisulfite Sequencing (WGBS)

bioinformatics more details view paper
  • Downloaded 1,479 times
  • Download rankings, all-time:
    • Site-wide: 4,527 out of 73,343
    • In bioinformatics: 867 out of 7,150
  • Year to date:
    • Site-wide: 13,431 out of 73,343
  • Since beginning of last month:
    • Site-wide: 13,429 out of 73,343

bigSCale: An Analytical Framework for Big-Scale Single-Cell Data

genomics more details view paper
  • Downloaded 1,438 times
  • Download rankings, all-time:
    • Site-wide: 4,754 out of 73,343
    • In genomics: 834 out of 4,869
  • Year to date:
    • Site-wide: 52,811 out of 73,343
  • Since beginning of last month:
    • Site-wide: 52,811 out of 73,343

Single Cell Transcriptome Conservation in Cryopreserved Cells and Tissues

genomics more details view paper
  • Downloaded 1,356 times
  • Download rankings, all-time:
    • Site-wide: 5,212 out of 73,343
    • In genomics: 905 out of 4,869
  • Year to date:
    • Site-wide: 64,402 out of 73,343
  • Since beginning of last month:
    • Site-wide: 62,710 out of 73,343

Tracking of antibiotic resistance transfer and rapid plasmid evolution in a hospital setting by Nanopore sequencing

genomics more details view paper
  • Downloaded 1,311 times
  • Download rankings, all-time:
    • Site-wide: 5,528 out of 73,343
    • In genomics: 943 out of 4,869
  • Year to date:
    • Site-wide: 5,784 out of 73,343
  • Since beginning of last month:
    • Site-wide: 5,784 out of 73,343

Comparative analysis of neutrophil and monocyte epigenomes

genomics more details view paper
  • Downloaded 1,077 times
  • Download rankings, all-time:
    • Site-wide: 7,659 out of 73,343
    • In genomics: 1,206 out of 4,869
  • Year to date:
    • Site-wide: 13,692 out of 73,343
  • Since beginning of last month:
    • Site-wide: 13,692 out of 73,343

DNA methylation oscillation defines classes of enhancers

genomics more details view paper
  • Downloaded 1,018 times
  • Download rankings, all-time:
    • Site-wide: 8,394 out of 73,343
    • In genomics: 1,303 out of 4,869
  • Year to date:
    • Site-wide: 20,900 out of 73,343
  • Since beginning of last month:
    • Site-wide: 20,900 out of 73,343

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

genomics more details view paper
  • Downloaded 920 times
  • Download rankings, all-time:
    • Site-wide: 9,921 out of 73,343
    • In genomics: 1,476 out of 4,869
  • Year to date:
    • Site-wide: 27,902 out of 73,343
  • Since beginning of last month:
    • Site-wide: 27,901 out of 73,343

An Approximate Bayesian Computation Approach to Examining the Phylogenetic Relationships among the Four Gibbon Genera using Whole Genome Sequence Data

genomics more details view paper
  • Downloaded 857 times
  • Download rankings, all-time:
    • Site-wide: 11,140 out of 73,343
    • In genomics: 1,608 out of 4,869
  • Year to date:
    • Site-wide: 68,404 out of 73,343
  • Since beginning of last month:
    • Site-wide: 70,064 out of 73,343

Massive gene presence/absence variation in the mussel genome as an adaptive strategy: first evidence of a pan-genome in Metazoa

genetics more details view paper
  • Downloaded 804 times
  • Download rankings, all-time:
    • Site-wide: 12,260 out of 73,343
    • In genetics: 847 out of 4,028
  • Year to date:
    • Site-wide: 5,504 out of 73,343
  • Since beginning of last month:
    • Site-wide: 5,504 out of 73,343

Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

genomics more details view paper
  • Downloaded 723 times
  • Download rankings, all-time:
    • Site-wide: 14,318 out of 73,343
    • In genomics: 1,893 out of 4,869
  • Year to date:
    • Site-wide: 7,918 out of 73,343
  • Since beginning of last month:
    • Site-wide: 7,919 out of 73,343

Genomic adaptations to aquatic and aerial life in mayflies and the origin of wings in insects

evolutionary biology more details view paper
  • Downloaded 434 times
  • Download rankings, all-time:
    • Site-wide: 28,243 out of 73,343
    • In evolutionary biology: 2,045 out of 4,734
  • Year to date:
    • Site-wide: 830 out of 73,343
  • Since beginning of last month:
    • Site-wide: 830 out of 73,343

Epigenomic and functional dynamics of human bone marrow myeloid differentiation to mature blood neutrophils

immunology more details view paper
  • Downloaded 420 times
  • Download rankings, all-time:
    • Site-wide: 29,290 out of 73,343
    • In immunology: 600 out of 1,907
  • Year to date:
    • Site-wide: 61,549 out of 73,343
  • Since beginning of last month:
    • Site-wide: 61,560 out of 73,343

Transposons played a major role in the diversification between the closely related almond (Prunus dulcis) and peach (P. persica) genomes: Results from the almond genome sequence

genomics more details view paper
  • Downloaded 379 times
  • Download rankings, all-time:
    • Site-wide: 32,813 out of 73,343
    • In genomics: 3,187 out of 4,869
  • Year to date:
    • Site-wide: 54,486 out of 73,343
  • Since beginning of last month:
    • Site-wide: 54,488 out of 73,343

Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma

cancer biology more details view paper
  • Downloaded 284 times
  • Download rankings, all-time:
    • Site-wide: 42,768 out of 73,343
    • In cancer biology: 1,350 out of 2,512
  • Year to date:
    • Site-wide: 14,723 out of 73,343
  • Since beginning of last month:
    • Site-wide: 14,724 out of 73,343

De novo assembly and annotation of the larval transcriptome of two spadefoot toads widely divergent in developmental rate

genomics more details view paper
  • Downloaded 209 times
  • Download rankings, all-time:
    • Site-wide: 52,961 out of 73,343
    • In genomics: 4,168 out of 4,869
  • Year to date:
    • Site-wide: 60,358 out of 73,343
  • Since beginning of last month:
    • Site-wide: 60,367 out of 73,343

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