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Author: Ivo Glynne Gut

Rankings

  • All-time downloads: 43,195 (rank: 2,690 out of 508,901)
  • Categories:
    • bioinformatics: 1,889 (rank: 6,709 (tie) out of 36,834)
    • cancer biology: 4,789 (rank: 479 out of 31,426)
    • developmental biology: 992 (rank: 3,083 (tie) out of 17,358)
    • evolutionary biology: 2,596 (rank: 1,396 out of 22,162)
    • genetics: 1,188 (rank: 12,630 (tie) out of 38,574)
    • genomics: 31,248 (rank: 256 out of 45,498)
    • immunology: 493 (rank: 12,976 (tie) out of 27,696)

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Preprints

Benchmarking Single-Cell RNA Sequencing Protocols for Cell Atlas Projects

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A Single-Cell Tumor Immune Atlas for Precision Oncology

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    • In cancer biology: 35 out of 3,735
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A Comprehensive Assessment of Somatic Mutation Calling in Cancer Genomes

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A comprehensive multicenter comparison of whole genome sequencing pipelines using a uniform tumor-normal sample pair

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GEMBS — high through-put processing for DNA methylation data from Whole Genome Bisulfite Sequencing (WGBS)

bioinformatics more details view paper
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    • In bioinformatics: 853 out of 9,553
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pheno-seq - linking morphological features to gene expression in 3D cell culture systems

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Selective single molecule sequencing and assembly of a human Y chromosome of African origin

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    • In genomics: 956 out of 6,427
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Tracking of antibiotic resistance transfer and rapid plasmid evolution in a hospital setting by Nanopore sequencing

genomics more details view paper
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    • In genomics: 959 out of 6,427
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    • Site-wide: 49,919 out of 117,931

bigSCale: An Analytical Framework for Big-Scale Single-Cell Data

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    • Site-wide: 8,819 out of 117,931
    • In genomics: 1,032 out of 6,427
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    • Site-wide: 67,562 out of 117,931
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    • Site-wide: 92,040 out of 117,931

Single Cell Transcriptome Conservation in Cryopreserved Cells and Tissues

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    • In genomics: 1,139 out of 6,427
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    • Site-wide: 78,420 out of 117,931

Population genomics of Saccharomyces cerevisiae human isolates: passengers, colonizers, invaders.

evolutionary biology more details view paper
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    • Site-wide: 10,402 out of 117,931
    • In evolutionary biology: 378 out of 6,171
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    • Site-wide: 79,499 out of 117,931

Comparative analysis of neutrophil and monocyte epigenomes

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    • Site-wide: 10,595 out of 117,931
    • In genomics: 1,229 out of 6,427
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    • Site-wide: 22,463 out of 117,931
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    • Site-wide: 38,668 out of 117,931

Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

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    • In genomics: 1,438 out of 6,427
  • Year to date:
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    • Site-wide: 13,166 out of 117,931

Massive gene presence/absence variation in the mussel genome as an adaptive strategy: first evidence of a pan-genome in Metazoa

genetics more details view paper
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    • Site-wide: 13,148 out of 117,931
    • In genetics: 703 out of 5,127
  • Year to date:
    • Site-wide: 14,942 out of 117,931
  • Since beginning of last month:
    • Site-wide: 31,231 out of 117,931

DNA methylation oscillation defines classes of enhancers

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    • In genomics: 1,529 out of 6,427
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    • Site-wide: 52,838 out of 117,931
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    • Site-wide: 34,218 out of 117,931

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

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    • In genomics: 1,710 out of 6,427
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Single cell expression analysis uncouples transdifferentiation and reprogramming

developmental biology more details view paper
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    • In developmental biology: 310 out of 3,110
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    • Site-wide: 76,608 out of 117,931

An Approximate Bayesian Computation Approach to Examining the Phylogenetic Relationships among the Four Gibbon Genera using Whole Genome Sequence Data

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    • Site-wide: 20,056 out of 117,931
    • In genomics: 2,085 out of 6,427
  • Year to date:
    • Site-wide: 114,908 out of 117,931
  • Since beginning of last month:
    • Site-wide: 112,905 out of 117,931

Genomic adaptations to aquatic and aerial life in mayflies and the origin of wings in insects

evolutionary biology more details view paper
  • Downloaded 888 times
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    • Site-wide: 20,163 out of 117,931
    • In evolutionary biology: 965 out of 6,171
  • Year to date:
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    • Site-wide: 65,778 out of 117,931

Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation

cancer biology more details view paper
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    • Site-wide: 20,871 out of 117,931
    • In cancer biology: 525 out of 3,735
  • Year to date:
    • Site-wide: 70,598 out of 117,931
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    • Site-wide: 53,652 out of 117,931

Epigenomic and functional dynamics of human bone marrow myeloid differentiation to mature blood neutrophils

immunology more details view paper
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    • In immunology: 1,132 out of 3,289
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    • Site-wide: 91,768 out of 117,931
  • Since beginning of last month:
    • Site-wide: 71,632 out of 117,931

Transposons played a major role in the diversification between the closely related almond (Prunus dulcis) and peach (P. persica) genomes: Results from the almond genome sequence

genomics more details view paper
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    • In genomics: 3,669 out of 6,427
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    • Site-wide: 69,747 out of 117,931
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    • Site-wide: 46,133 out of 117,931

The genome sequence of the octocoral Paramuricea clavata – a key resource to study the impact of climate change in the Mediterranean

genomics more details view paper
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    • In genomics: 4,657 out of 6,427
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Genomic evidence for recurrent genetic admixture during domestication mediterranean olive trees (Olea europaea).

evolutionary biology more details view paper
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    • In evolutionary biology: 3,908 out of 6,171
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De novo assembly and annotation of the larval transcriptome of two spadefoot toads widely divergent in developmental rate

genomics more details view paper
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    • In genomics: 5,246 out of 6,427
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    • Site-wide: 114,113 out of 117,931

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