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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,145 bioRxiv papers from 295,454 authors.

Author: Elana J. Fertig

Rankings

  • All-time downloads: 21,365 (rank: 1,231 out of 295,568)
  • Categories:
    • bioinformatics: 8,429 (rank: 413 out of 25,781)
    • cancer biology: 3,392 (rank: 438 (tie) out of 18,815)
    • developmental biology: 3,186 (rank: 188 (tie) out of 11,194)
    • genomics: 1,062 (rank: 12,696 (tie) out of 33,658)
    • neuroscience: 1,388 (rank: 7,426 (tie) out of 49,604)
    • systems biology: 3,908 (rank: 323 out of 8,913)

Downloads per author, site-wide

Preprints

Functional normalization of 450k methylation array data improves replication in large cancer studies

bioinformatics more details view paper
  • Downloaded 3,461 times
  • Download rankings, all-time:
    • Site-wide: 897 out of 67,174
    • In bioinformatics: 179 out of 6,627
  • Year to date:
    • Site-wide: 21,324 out of 67,174
  • Since beginning of last month:
    • Site-wide: 9,266 out of 67,174

Comprehensive analysis of retinal development at single cell resolution identifies NFI factors as essential for mitotic exit and specification of late-born cells

developmental biology more details view paper
  • Downloaded 3,186 times
  • Download rankings, all-time:
    • Site-wide: 1,054 out of 67,174
    • In developmental biology: 15 out of 1,998
  • Year to date:
    • Site-wide: 779 out of 67,174
  • Since beginning of last month:
    • Site-wide: 5,341 out of 67,174

Enter the matrix: factorization uncovers knowledge from omics

systems biology more details view paper
  • Downloaded 2,822 times
  • Download rankings, all-time:
    • Site-wide: 1,323 out of 67,174
    • In systems biology: 28 out of 1,863
  • Year to date:
    • Site-wide: 7,574 out of 67,174
  • Since beginning of last month:
    • Site-wide: 24,524 out of 67,174

Epigenetic Regulation of Gene Expression in Cancer: Techniques, Resources, and Analysis

cancer biology more details view paper
  • Downloaded 1,730 times
  • Download rankings, all-time:
    • Site-wide: 3,116 out of 67,174
    • In cancer biology: 77 out of 2,267
  • Year to date:
    • Site-wide: 11,260 out of 67,174
  • Since beginning of last month:
    • Site-wide: 6,784 out of 67,174

Decomposing cell identity for transfer learning across cellular measurements, platforms, tissues, and species.

bioinformatics more details view paper
  • Downloaded 1,723 times
  • Download rankings, all-time:
    • Site-wide: 3,140 out of 67,174
    • In bioinformatics: 628 out of 6,627
  • Year to date:
    • Site-wide: 3,427 out of 67,174
  • Since beginning of last month:
    • Site-wide: 16,318 out of 67,174

Integrated time course omics analysis distinguishes immediate therapeutic response from acquired resistance.

cancer biology more details view paper
  • Downloaded 1,320 times
  • Download rankings, all-time:
    • Site-wide: 4,898 out of 67,174
    • In cancer biology: 126 out of 2,267
  • Year to date:
    • Site-wide: 25,030 out of 67,174
  • Since beginning of last month:
    • Site-wide: 38,878 out of 67,174

CancerInSilico: An R/Bioconductor package for combining mathematical and statistical modeling to simulate time course bulk and single cell gene expression data in cancer

systems biology more details view paper
  • Downloaded 1,086 times
  • Download rankings, all-time:
    • Site-wide: 6,783 out of 67,174
    • In systems biology: 195 out of 1,863
  • Year to date:
    • Site-wide: 7,926 out of 67,174
  • Since beginning of last month:
    • Site-wide: 23,357 out of 67,174

Splice Expression Variation Analysis (SEVA) for Inter-tumor Heterogeneity of Gene Isoform Usage in Cancer

genomics more details view paper
  • Downloaded 1,062 times
  • Download rankings, all-time:
    • Site-wide: 7,036 out of 67,174
    • In genomics: 1,133 out of 4,566
  • Year to date:
    • Site-wide: 31,480 out of 67,174
  • Since beginning of last month:
    • Site-wide: 58,595 out of 67,174

Single-cell analysis of human retina identifies evolutionarily conserved and species-specific mechanisms controlling development.

neuroscience more details view paper
  • Downloaded 830 times
  • Download rankings, all-time:
    • Site-wide: 10,404 out of 67,174
    • In neuroscience: 1,651 out of 12,046
  • Year to date:
    • Site-wide: 2,686 out of 67,174
  • Since beginning of last month:
    • Site-wide: 1,186 out of 67,174

Expression variation analysis for tumor heterogeneity in single-cell RNA-sequencing data

bioinformatics more details view paper
  • Downloaded 818 times
  • Download rankings, all-time:
    • Site-wide: 10,644 out of 67,174
    • In bioinformatics: 1,805 out of 6,627
  • Year to date:
    • Site-wide: 5,126 out of 67,174
  • Since beginning of last month:
    • Site-wide: None out of 67,174

StereoGene: Rapid Estimation of Genomewide Correlation of Continuous or Interval Feature Data

bioinformatics more details view paper
  • Downloaded 811 times
  • Download rankings, all-time:
    • Site-wide: 10,774 out of 67,174
    • In bioinformatics: 1,825 out of 6,627
  • Year to date:
    • Site-wide: 43,810 out of 67,174
  • Since beginning of last month:
    • Site-wide: 56,849 out of 67,174

Human cortical neural stem cells generate regional organizer states in vitro before committing to excitatory neuronal fates

neuroscience more details view paper
  • Downloaded 558 times
  • Download rankings, all-time:
    • Site-wide: 18,373 out of 67,174
    • In neuroscience: 3,090 out of 12,046
  • Year to date:
    • Site-wide: 5,383 out of 67,174
  • Since beginning of last month:
    • Site-wide: 10,376 out of 67,174

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF

bioinformatics more details view paper
  • Downloaded 519 times
  • Download rankings, all-time:
    • Site-wide: 20,126 out of 67,174
    • In bioinformatics: 2,975 out of 6,627
  • Year to date:
    • Site-wide: 54,507 out of 67,174
  • Since beginning of last month:
    • Site-wide: 57,375 out of 67,174

Synthesizer: Expediting synthesis studies from context-free data with natural language processing

bioinformatics more details view paper
  • Downloaded 381 times
  • Download rankings, all-time:
    • Site-wide: 28,804 out of 67,174
    • In bioinformatics: 3,815 out of 6,627
  • Year to date:
    • Site-wide: 62,093 out of 67,174
  • Since beginning of last month:
    • Site-wide: 63,036 out of 67,174

projectR: An R/Bioconductor package for transfer learning via PCA, NMF, correlation, and clustering

bioinformatics more details view paper
  • Downloaded 359 times
  • Download rankings, all-time:
    • Site-wide: 30,618 out of 67,174
    • In bioinformatics: 3,972 out of 6,627
  • Year to date:
    • Site-wide: 11,132 out of 67,174
  • Since beginning of last month:
    • Site-wide: 19,718 out of 67,174

REVA: a rank-based multi-dimensional measure of correlation

bioinformatics more details view paper
  • Downloaded 357 times
  • Download rankings, all-time:
    • Site-wide: 30,788 out of 67,174
    • In bioinformatics: 3,983 out of 6,627
  • Year to date:
    • Site-wide: 45,388 out of 67,174
  • Since beginning of last month:
    • Site-wide: 31,654 out of 67,174

Integrated single cell and bulk multi-omics reveals heterogeneity and early changes in pathways associated with cetuximab resistance in HNSCC sensitive cell lines

cancer biology more details view paper
  • Downloaded 342 times
  • Download rankings, all-time:
    • Site-wide: 32,091 out of 67,174
    • In cancer biology: 1,003 out of 2,267
  • Year to date:
    • Site-wide: 12,022 out of 67,174
  • Since beginning of last month:
    • Site-wide: 4,286 out of 67,174

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