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Author: Valentine Svensson

Rankings

  • All-time downloads: 37,424 (rank: 892 out of 360,137)
  • Categories:
    • bioinformatics: 10,199 (rank: 507 out of 31,168)
    • developmental biology: 1,793 (rank: 868 (tie) out of 13,999)
    • genomics: 18,530 (rank: 463 out of 39,021)
    • immunology: 1,729 (rank: 1,490 (tie) out of 18,500)
    • neuroscience: 2,343 (rank: 6,001 (tie) out of 60,535)
    • systems biology: 2,830 (rank: 833 (tie) out of 10,774)

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Preprints

Power Analysis of Single Cell RNA‐Sequencing Experiments

genomics more details view paper
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    • In genomics: 51 out of 5,407
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    • Site-wide: 19,612 out of 83,578
  • Since beginning of last month:
    • Site-wide: 21,427 out of 83,578

Droplet scRNA-seq is not zero-inflated

bioinformatics more details view paper
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    • Site-wide: 915 out of 83,578
    • In bioinformatics: 165 out of 8,009
  • Year to date:
    • Site-wide: 1,559 out of 83,578
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    • Site-wide: 3,835 out of 83,578

A curated database reveals trends in single-cell transcriptomics

genomics more details view paper
  • Downloaded 3,476 times
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    • Site-wide: 1,297 out of 83,578
    • In genomics: 284 out of 5,407
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    • Site-wide: 1,382 out of 83,578
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    • Site-wide: 2,634 out of 83,578

Interpretable factor models of single-cell RNA-seq via variational autoencoders

bioinformatics more details view paper
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    • Site-wide: 1,332 out of 83,578
    • In bioinformatics: 242 out of 8,009
  • Year to date:
    • Site-wide: 1,227 out of 83,578
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    • Site-wide: 2,919 out of 83,578

SpatialDE - Identification of spatially variable genes

genomics more details view paper
  • Downloaded 2,882 times
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    • Site-wide: 1,809 out of 83,578
    • In genomics: 370 out of 5,407
  • Year to date:
    • Site-wide: 22,314 out of 83,578
  • Since beginning of last month:
    • Site-wide: 22,227 out of 83,578

Temporal mixture modelling of single-cell RNA-seq data resolves a CD4+ T cell fate bifurcation

systems biology more details view paper
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    • Site-wide: 1,870 out of 83,578
    • In systems biology: 46 out of 2,211
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    • Site-wide: 34,205 out of 83,578
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    • Site-wide: 25,394 out of 83,578

Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq

genomics more details view paper
  • Downloaded 2,604 times
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    • Site-wide: 2,141 out of 83,578
    • In genomics: 426 out of 5,407
  • Year to date:
    • Site-wide: 3,628 out of 83,578
  • Since beginning of last month:
    • Site-wide: 5,874 out of 83,578

RNA velocity and protein acceleration from single-cell multiomics experiments

bioinformatics more details view paper
  • Downloaded 2,551 times
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    • Site-wide: 2,231 out of 83,578
    • In bioinformatics: 413 out of 8,009
  • Year to date:
    • Site-wide: 9,646 out of 83,578
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    • Site-wide: 18,410 out of 83,578

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

neuroscience more details view paper
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    • Site-wide: 2,578 out of 83,578
    • In neuroscience: 365 out of 14,870
  • Year to date:
    • Site-wide: 320 out of 83,578
  • Since beginning of last month:
    • Site-wide: 699 out of 83,578

Single-cell transcriptomics identifies CD44 as a new marker and regulator of haematopoietic stem cells development

developmental biology more details view paper
  • Downloaded 1,793 times
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    • Site-wide: 4,031 out of 83,578
    • In developmental biology: 64 out of 2,488
  • Year to date:
    • Site-wide: 12,908 out of 83,578
  • Since beginning of last month:
    • Site-wide: 16,137 out of 83,578

Transcriptome Dynamics Reveals Progressive Transition from Effector to Memory in CD4+ T cells.

immunology more details view paper
  • Downloaded 1,511 times
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    • Site-wide: 5,350 out of 83,578
    • In immunology: 114 out of 2,327
  • Year to date:
    • Site-wide: 10,491 out of 83,578
  • Since beginning of last month:
    • Site-wide: 15,822 out of 83,578

Single-cell transcriptomics of allo-reactive CD4+ T cells over time reveals divergent fates during gut GVHD

immunology more details view paper
  • Downloaded 218 times
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    • Site-wide: 61,779 out of 83,578
    • In immunology: 1,584 out of 2,327
  • Year to date:
    • Site-wide: 9,370 out of 83,578
  • Since beginning of last month:
    • Site-wide: 12,196 out of 83,578

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