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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,933 bioRxiv papers from 279,142 authors.

Author: Ran Blekhman

Rankings

  • All-time downloads: 63,106 (rank: 190 out of 279,142)
  • Categories:
    • bioinformatics: 6,969 (rank: 537 (tie) out of 24,417)
    • cancer biology: 1,953 (rank: 971 (tie) out of 17,292)
    • genomics: 40,463 (rank: 129 out of 31,956)
    • microbiology: 6,750 (rank: 90 out of 28,578)
    • scientific communication and education: 6,156 (rank: 40 (tie) out of 2,374)
    • systems biology: 815 (rank: 2,361 (tie) out of 8,483)

Downloads per author, site-wide

Preprints

Common methods for fecal sample storage in field studies yield consistent signatures of individual identity in microbiome sequencing data

genomics more details view paper
  • Downloaded 33,621 times
  • Download rankings, all-time:
    • Site-wide: 12 out of 62,933
    • In genomics: 4 out of 4,316
  • Year to date:
    • Site-wide: 2 out of 62,933
  • Since beginning of last month:
    • Site-wide: 53,367 out of 62,933

Tracking the popularity and outcomes of all bioRxiv preprints

scientific communication and education more details view paper
  • Downloaded 6,156 times
  • Download rankings, all-time:
    • Site-wide: 274 out of 62,933
    • In scientific communication and education: 10 out of 450
  • Year to date:
    • Site-wide: 50 out of 62,933
  • Since beginning of last month:
    • Site-wide: 771 out of 62,933

Challenges and recommendations to improve the installability and archival stability of omics computational tools

bioinformatics more details view paper
  • Downloaded 4,542 times
  • Download rankings, all-time:
    • Site-wide: 483 out of 62,933
    • In bioinformatics: 99 out of 6,251
  • Year to date:
    • Site-wide: 513 out of 62,933
  • Since beginning of last month:
    • Site-wide: 2,882 out of 62,933

Gut microbiota has a widespread and modifiable effect on host gene regulation

genomics more details view paper
  • Downloaded 3,636 times
  • Download rankings, all-time:
    • Site-wide: 762 out of 62,933
    • In genomics: 196 out of 4,316
  • Year to date:
    • Site-wide: 1,116 out of 62,933
  • Since beginning of last month:
    • Site-wide: 6,807 out of 62,933

BugBase Predicts Organism Level Microbiome Phenotypes

bioinformatics more details view paper
  • Downloaded 2,427 times
  • Download rankings, all-time:
    • Site-wide: 1,587 out of 62,933
    • In bioinformatics: 319 out of 6,251
  • Year to date:
    • Site-wide: 3,415 out of 62,933
  • Since beginning of last month:
    • Site-wide: 4,144 out of 62,933

Variation in rural African gut microbiota is strongly correlated with colonization by Entamoeba and subsistence

microbiology more details view paper
  • Downloaded 1,627 times
  • Download rankings, all-time:
    • Site-wide: 3,175 out of 62,933
    • In microbiology: 91 out of 5,025
  • Year to date:
    • Site-wide: 41,966 out of 62,933
  • Since beginning of last month:
    • Site-wide: 44,620 out of 62,933

Global Genetic Cartography of Urban Metagenomes and Anti-Microbial Resistance

microbiology more details view paper
  • Downloaded 1,543 times
  • Download rankings, all-time:
    • Site-wide: 3,472 out of 62,933
    • In microbiology: 102 out of 5,025
  • Year to date:
    • Site-wide: 669 out of 62,933
  • Since beginning of last month:
    • Site-wide: 209 out of 62,933

Colorectal cancer mutational profiles correlate with defined microbial communities in the tumor microenvironment

cancer biology more details view paper
  • Downloaded 1,494 times
  • Download rankings, all-time:
    • Site-wide: 3,660 out of 62,933
    • In cancer biology: 90 out of 2,061
  • Year to date:
    • Site-wide: 34,511 out of 62,933
  • Since beginning of last month:
    • Site-wide: 26,011 out of 62,933

HOMINID: A framework for identifying associations between host genetic variation and microbiome composition

genomics more details view paper
  • Downloaded 1,378 times
  • Download rankings, all-time:
    • Site-wide: 4,189 out of 62,933
    • In genomics: 768 out of 4,316
  • Year to date:
    • Site-wide: 44,314 out of 62,933
  • Since beginning of last month:
    • Site-wide: 41,694 out of 62,933

Ecological and evolutionary adaptations shape the gut microbiome of BaAka African rainforest hunter-gatherers

microbiology more details view paper
  • Downloaded 1,234 times
  • Download rankings, all-time:
    • Site-wide: 5,007 out of 62,933
    • In microbiology: 176 out of 5,025
  • Year to date:
    • Site-wide: 48,749 out of 62,933
  • Since beginning of last month:
    • Site-wide: 37,170 out of 62,933

Gut Microbiota Diversity across Ethnicities in the United States

microbiology more details view paper
  • Downloaded 1,215 times
  • Download rankings, all-time:
    • Site-wide: 5,131 out of 62,933
    • In microbiology: 180 out of 5,025
  • Year to date:
    • Site-wide: 8,452 out of 62,933
  • Since beginning of last month:
    • Site-wide: 26,033 out of 62,933

Megaphage infect Prevotella and variants are widespread in gut microbiomes

microbiology more details view paper
  • Downloaded 1,131 times
  • Download rankings, all-time:
    • Site-wide: 5,806 out of 62,933
    • In microbiology: 221 out of 5,025
  • Year to date:
    • Site-wide: 11,460 out of 62,933
  • Since beginning of last month:
    • Site-wide: 29,021 out of 62,933

Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment

genomics more details view paper
  • Downloaded 844 times
  • Download rankings, all-time:
    • Site-wide: 9,292 out of 62,933
    • In genomics: 1,402 out of 4,316
  • Year to date:
    • Site-wide: 53,458 out of 62,933
  • Since beginning of last month:
    • Site-wide: 52,088 out of 62,933

Interaction Between Host MicroRNAs and the Gut Microbiota in Colorectal Cancer

systems biology more details view paper
  • Downloaded 815 times
  • Download rankings, all-time:
    • Site-wide: 9,795 out of 62,933
    • In systems biology: 279 out of 1,783
  • Year to date:
    • Site-wide: 43,109 out of 62,933
  • Since beginning of last month:
    • Site-wide: 49,820 out of 62,933

Genetic and transcriptional analysis of human host response to healthy gut microbiome

genomics more details view paper
  • Downloaded 618 times
  • Download rankings, all-time:
    • Site-wide: 14,529 out of 62,933
    • In genomics: 1,898 out of 4,316
  • Year to date:
    • Site-wide: 55,050 out of 62,933
  • Since beginning of last month:
    • Site-wide: 55,742 out of 62,933

Distinct Microbes, Metabolites, and Ecologies Define the Microbiome in Deficient and Proficient Mismatch Repair Colorectal Cancers

cancer biology more details view paper
  • Downloaded 459 times
  • Download rankings, all-time:
    • Site-wide: 21,295 out of 62,933
    • In cancer biology: 646 out of 2,061
  • Year to date:
    • Site-wide: 34,231 out of 62,933
  • Since beginning of last month:
    • Site-wide: 38,810 out of 62,933

Interactions between the gut microbiome and host gene regulation in cystic fibrosis

genomics more details view paper
  • Downloaded 366 times
  • Download rankings, all-time:
    • Site-wide: 27,226 out of 62,933
    • In genomics: 2,796 out of 4,316
  • Year to date:
    • Site-wide: 8,220 out of 62,933
  • Since beginning of last month:
    • Site-wide: 6,006 out of 62,933

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