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Author: Christian Beisel

Rankings

  • All-time downloads: 28,289 (rank: 8,292 (tie) )
  • Categories:
    • bioinformatics: 723 (rank: 24,039 (tie) )
    • cancer biology: 1,577 (rank: 6,428 (tie) )
    • epidemiology: 2,636 (rank: 6,008 (tie) )
    • evolutionary biology: 1,536 (rank: 5,108 (tie) )
    • genomics: 2,497 (rank: 11,422 (tie) )
    • infectious diseases: 9,164 (rank: 6,849 (tie) )
    • microbiology: 1,309 (rank: 14,874 (tie) )
    • oncology: 3,018 (rank: 95 (tie) )
    • synthetic biology: 2,341 (rank: 843 (tie) )
    • systems biology: 3,488 (rank: 1,404 (tie) )

Downloads per author, site-wide

Preprints

Detection of SARS-CoV-2 variants in Switzerland by genomic analysis of wastewater samples

infectious diseases more details view paper
  • Downloaded 8,597 times
  • Download rankings, all-time:
    • Site-wide: 1,389
    • In infectious diseases: 423
  • Year to date:
    • Site-wide: 6,301
  • Since beginning of last month:
    • Site-wide: 2,352

The Tumor Profiler Study: Integrated, multi-omic, functional tumor profiling for clinical decision support

oncology more details view paper
  • Downloaded 3,018 times
  • Download rankings, all-time:
    • Site-wide: 5,714
    • In oncology: 6
  • Year to date:
    • Site-wide: 6,265
  • Since beginning of last month:
    • Site-wide: 11,431

Large-scale DNA-based phenotypic recording and deep learning enable highly accurate sequence-function mapping

synthetic biology more details view paper
  • Downloaded 2,341 times
  • Download rankings, all-time:
    • Site-wide: 8,262
    • In synthetic biology: 85
  • Year to date:
    • Site-wide: 37,673
  • Since beginning of last month:
    • Site-wide: 79,263

A high density map for navigating the human Polycomb complexome

systems biology more details view paper
  • Downloaded 1,298 times
  • Download rankings, all-time:
    • Site-wide: 19,953
    • In systems biology: 362
  • Year to date:
    • Site-wide: 142,038
  • Since beginning of last month:
    • Site-wide: 82,653

Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland

epidemiology more details view paper
  • Downloaded 1,234 times
  • Download rankings, all-time:
    • Site-wide: 21,566
    • In epidemiology: 1,365
  • Year to date:
    • Site-wide: 28,908
  • Since beginning of last month:
    • Site-wide: 20,313

Spatial distribution of private gene mutations in clear cell renal cell carcinoma

cancer biology more details view paper
  • Downloaded 1,147 times
  • Download rankings, all-time:
    • Site-wide: 24,118
    • In cancer biology: 587
  • Year to date:
    • Site-wide: 27,617
  • Since beginning of last month:
    • Site-wide: 82,711

Quantifying SARS-CoV-2 spread in Switzerland based on genomic sequencing data

epidemiology more details view paper
  • Downloaded 1,100 times
  • Download rankings, all-time:
    • Site-wide: 25,726
    • In epidemiology: 1,538
  • Year to date:
    • Site-wide: 75,459
  • Since beginning of last month:
    • Site-wide: 43,079

Within-patient genetic diversity of SARS-CoV-2

genomics more details view paper
  • Downloaded 1,070 times
  • Download rankings, all-time:
    • Site-wide: 26,829
    • In genomics: 2,372
  • Year to date:
    • Site-wide: 38,705
  • Since beginning of last month:
    • Site-wide: 31,771

Convergent network effects along the axis of gene expression during prostate cancer progression

systems biology more details view paper
  • Downloaded 978 times
  • Download rankings, all-time:
    • Site-wide: 30,636
    • In systems biology: 596
  • Year to date:
    • Site-wide: 74,401
  • Since beginning of last month:
    • Site-wide: 116,526

Multiple Introductions of the Mycobacterium tuberculosis Lineage 2 Beijing into Africa over centuries

evolutionary biology more details view paper
  • Downloaded 750 times
  • Download rankings, all-time:
    • Site-wide: 45,052
    • In evolutionary biology: 2,040
  • Year to date:
    • Site-wide: 90,635
  • Since beginning of last month:
    • Site-wide: 69,423

Phylogenomics of Mycobacterium africanum reveals a new lineage and a complex evolutionary history

genomics more details view paper
  • Downloaded 730 times
  • Download rankings, all-time:
    • Site-wide: 46,822
    • In genomics: 3,579
  • Year to date:
    • Site-wide: 99,776
  • Since beginning of last month:
    • Site-wide: 115,132

Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity

bioinformatics more details view paper
  • Downloaded 723 times
  • Download rankings, all-time:
    • Site-wide: 47,428
    • In bioinformatics: 4,859
  • Year to date:
    • Site-wide: 85,150
  • Since beginning of last month:
    • Site-wide: 120,867

Reference Set of Mycobacterium tuberculosis Clinical Strains: A tool for research and product development

microbiology more details view paper
  • Downloaded 706 times
  • Download rankings, all-time:
    • Site-wide: 48,977
    • In microbiology: 2,965
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 149,902

Network analysis identifies regulators of lineage-specific phenotypes in Mycobacterium tuberculosis

systems biology more details view paper
  • Downloaded 625 times
  • Download rankings, all-time:
    • Site-wide: 57,736
    • In systems biology: 1,228
  • Year to date:
    • Site-wide: 114,056
  • Since beginning of last month:
    • Site-wide: 52,575

Resource misallocation as a mediator of fitness costs in antibiotic resistance.

microbiology more details view paper
  • Downloaded 603 times
  • Download rankings, all-time:
    • Site-wide: 60,472
    • In microbiology: 3,735
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 126,563

Exploiting variability of single cells to uncover the in vivo hierarchy of miRNA targets

systems biology more details view paper
  • Downloaded 587 times
  • Download rankings, all-time:
    • Site-wide: 62,617
    • In systems biology: 1,357
  • Year to date:
    • Site-wide: 141,938
  • Since beginning of last month:
    • Site-wide: 68,627

DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2

infectious diseases more details view paper
  • Downloaded 567 times
  • Download rankings, all-time:
    • Site-wide: 65,377
    • In infectious diseases: 3,915
  • Year to date:
    • Site-wide: 58,211
  • Since beginning of last month:
    • Site-wide: 18,981

A New Phylogenetic Framework for the Animal-adapted Mycobacterium tuberculosis Complex

evolutionary biology more details view paper
  • Downloaded 564 times
  • Download rankings, all-time:
    • Site-wide: 65,745
    • In evolutionary biology: 3,188
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 153,165

Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim

genomics more details view paper
  • Downloaded 353 times
  • Download rankings, all-time:
    • Site-wide: 106,792
    • In genomics: 6,280
  • Year to date:
    • Site-wide: 109,301
  • Since beginning of last month:
    • Site-wide: 113,706

Comparative genomics of Mycobacterium africanum Lineage 5 and Lineage 6 from Ghana suggests different ecological niches

genomics more details view paper
  • Downloaded 344 times
  • Download rankings, all-time:
    • Site-wide: 109,212
    • In genomics: 6,374
  • Year to date:
    • Site-wide: 142,909
  • Since beginning of last month:
    • Site-wide: 159,538

Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data

epidemiology more details view paper
  • Downloaded 302 times
  • Download rankings, all-time:
    • Site-wide: 119,901
    • In epidemiology: 5,105
  • Year to date:
    • Site-wide: 41,733
  • Since beginning of last month:
    • Site-wide: 20,941

A statistical test for clonal exclusivity in tumour evolution

cancer biology more details view paper
  • Downloaded 262 times
  • Download rankings, all-time:
    • Site-wide: 130,850
    • In cancer biology: 3,983
  • Year to date:
    • Site-wide: 57,439
  • Since beginning of last month:
    • Site-wide: 88,658

Large-scale phylogenomics of the genus Macrostomum (Platyhelminthes) reveals cryptic diversity and novel sexual traits

evolutionary biology more details view paper
  • Downloaded 222 times
  • Download rankings, all-time:
    • Site-wide: 141,803
    • In evolutionary biology: 6,785
  • Year to date:
    • Site-wide: 38,331
  • Since beginning of last month:
    • Site-wide: 34,482

Dynamic changes of genomic and transcriptomic tumor diversity during melanoma progression

cancer biology more details view paper
  • Downloaded 168 times
  • Download rankings, all-time:
    • Site-wide: 154,539
    • In cancer biology: 4,757
  • Year to date:
    • Site-wide: 107,334
  • Since beginning of last month:
    • Site-wide: 169,692

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