Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,292 bioRxiv papers from 276,522 authors.

Downloads per author, site-wide

Preprints

Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software

• Downloaded 6,490 times
• Download rankings, all-time:
  • Site-wide: 253 out of 62,292
  • In bioinformatics: 43 out of 6,225
• Year to date:
  • Site-wide: 6,434 out of 62,292
• Since beginning of last month:
  • Site-wide: 10,838 out of 62,292

Resolving microbial microdiversity with high accuracy full length 16S rRNA Illumina sequencing

• Downloaded 3,228 times
• Download rankings, all-time:
  • Site-wide: 924 out of 62,292
  • In molecular biology: 20 out of 1,948
• Year to date:
  • Site-wide: 24,967 out of 62,292
• Since beginning of last month:
  • Site-wide: 18,164 out of 62,292

Alignathon: A competitive assessment of whole genome alignment methods.

• Downloaded 3,096 times
• Download rankings, all-time:
  • Site-wide: 1,004 out of 62,292
  • In bioinformatics: 207 out of 6,225
• Year to date:
  • Site-wide: 20,734 out of 62,292
• Since beginning of last month:
  • Site-wide: 16,693 out of 62,292

CAMISIM: Simulating metagenomes and microbial communities

• Downloaded 1,323 times
• Download rankings, all-time:
  • Site-wide: 4,407 out of 62,292
  • In bioinformatics: 872 out of 6,225
• Year to date:
  • Site-wide: 3,238 out of 62,292
• Since beginning of last month:
  • Site-wide: 9,419 out of 62,292

Hackflex: low cost Illumina sequencing library construction for high sample counts

• Downloaded 1,183 times
• Download rankings, all-time:
  • Site-wide: 5,269 out of 62,292
  • In genomics: 903 out of 4,282
• Year to date:
  • Site-wide: 1,049 out of 62,292
• Since beginning of last month:
  • Site-wide: 23 out of 62,292

Effective Online Bayesian Phylogenetics Via Sequential Monte Carlo With Guided Proposals

• Downloaded 684 times
• Download rankings, all-time:
  • Site-wide: 12,381 out of 62,292
  • In bioinformatics: 2,058 out of 6,225
• Year to date:
  • Site-wide: 36,716 out of 62,292
• Since beginning of last month:
  • Site-wide: 28,021 out of 62,292

bin3C : Exploiting Hi-C sequencing data to accurately resolve metagenome-assembled genomes (MAGs)

• Downloaded 683 times
• Download rankings, all-time:
  • Site-wide: 12,404 out of 62,292
  • In bioinformatics: 2,059 out of 6,225
• Year to date:
  • Site-wide: 12,785 out of 62,292
• Since beginning of last month:
  • Site-wide: 37,957 out of 62,292

Sim3C: Simulation Of HiC And Meta3C Proximity Ligation Sequencing Technologies

• Downloaded 562 times
• Download rankings, all-time:
  • Site-wide: 16,243 out of 62,292
  • In bioinformatics: 2,531 out of 6,225
• Year to date:
  • Site-wide: 49,509 out of 62,292
• Since beginning of last month:
  • Site-wide: 33,813 out of 62,292

The Impact of Migratory Flyways on the Spread of Avian Influenza Virus in North America

• Downloaded 456 times
• Download rankings, all-time:
  • Site-wide: 21,083 out of 62,292
  • In evolutionary biology: 1,575 out of 4,210
• Year to date:
  • Site-wide: 38,883 out of 62,292
• Since beginning of last month:
  • Site-wide: 31,905 out of 62,292

Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics

• Downloaded 420 times
• Download rankings, all-time:
  • Site-wide: 23,114 out of 62,292
  • In bioinformatics: 3,297 out of 6,225
• Year to date:
  • Site-wide: 6,201 out of 62,292
• Since beginning of last month:
  • Site-wide: 4,843 out of 62,292

Porcine commensal Escherichia coli: A reservoir for class 1 integrons associated with IS26

• Downloaded 406 times
• Download rankings, all-time:
  • Site-wide: 23,994 out of 62,292
  • In genomics: 2,595 out of 4,282
• Year to date:
  • Site-wide: 46,109 out of 62,292
• Since beginning of last month:
  • Site-wide: 34,630 out of 62,292

A new massively-parallel transposon mutagenesis approach comparing multiple datasets identifies novel mechanisms of action and resistance to triclosan

• Downloaded 344 times
• Download rankings, all-time:
  • Site-wide: 28,415 out of 62,292
  • In microbiology: 1,722 out of 4,992
• Year to date:
  • Site-wide: 8,626 out of 62,292
• Since beginning of last month:
  • Site-wide: 12,630 out of 62,292

Evaluation of ddRADseq for reduced representation metagenome sequencing

• Downloaded 318 times
• Download rankings, all-time:
  • Site-wide: 30,710 out of 62,292
  • In genomics: 3,018 out of 4,282
• Year to date:
  • Site-wide: 58,331 out of 62,292
• Since beginning of last month:
  • Site-wide: 42,275 out of 62,292

Genomes from Bacteria Associated with the Canine Oral Cavity: a Test Case for Automated Genome-Based Taxonomic Assignment

• Downloaded 226 times
• Download rankings, all-time:
  • Site-wide: 40,151 out of 62,292
  • In bioinformatics: 4,770 out of 6,225
• Year to date:
  • Site-wide: 16,246 out of 62,292
• Since beginning of last month:
  • Site-wide: 27,294 out of 62,292

Trial by phylogenetics - Evaluating the Multi-Species Coalescent for evolutionary inference on taxa with high levels of paralogy (Gonyaulacales, Dinophyceae).

• Downloaded 120 times
• Download rankings, all-time:
  • Site-wide: 53,847 out of 62,292
  • In evolutionary biology: 3,795 out of 4,210
• Year to date:
  • Site-wide: 33,342 out of 62,292
• Since beginning of last month:
  • Site-wide: 32,337 out of 62,292