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Author: Aaron Darling

Rankings

  • All-time downloads: 11,036 (rank: 6,134 out of 360,137)
  • Categories:
    • bioinformatics: 6,239 (rank: 1,171 out of 31,168)
    • evolutionary biology: 723 (rank: 6,620 (tie) out of 18,693)
    • genomics: 3,572 (rank: 5,161 (tie) out of 39,021)
    • microbiology: 502 (rank: 14,790 (tie) out of 39,486)

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Preprints

Alignathon: A competitive assessment of whole genome alignment methods.

bioinformatics more details view paper
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    • In bioinformatics: 272 out of 8,009
  • Year to date:
    • Site-wide: 39,534 out of 83,578
  • Since beginning of last month:
    • Site-wide: 35,449 out of 83,578

Hackflex: low cost Illumina sequencing library construction for high sample counts

genomics more details view paper
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    • Site-wide: 1,947 out of 83,578
    • In genomics: 396 out of 5,407
  • Year to date:
    • Site-wide: 966 out of 83,578
  • Since beginning of last month:
    • Site-wide: 1,104 out of 83,578

Effective Online Bayesian Phylogenetics Via Sequential Monte Carlo With Guided Proposals

bioinformatics more details view paper
  • Downloaded 747 times
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    • In bioinformatics: 2,532 out of 8,009
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    • Site-wide: 61,756 out of 83,578
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    • Site-wide: 47,274 out of 83,578

bin3C : Exploiting Hi-C sequencing data to accurately resolve metagenome-assembled genomes (MAGs)

bioinformatics more details view paper
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    • In bioinformatics: 2,575 out of 8,009
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    • Site-wide: 76,235 out of 83,578
  • Since beginning of last month:
    • Site-wide: 79,400 out of 83,578

Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics

bioinformatics more details view paper
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    • Site-wide: 20,952 out of 83,578
    • In bioinformatics: 3,048 out of 8,009
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    • Site-wide: 27,392 out of 83,578
  • Since beginning of last month:
    • Site-wide: 21,528 out of 83,578

Sim3C: Simulation Of HiC And Meta3C Proximity Ligation Sequencing Technologies

bioinformatics more details view paper
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    • In bioinformatics: 3,186 out of 8,009
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    • Site-wide: 76,675 out of 83,578

The Impact of Migratory Flyways on the Spread of Avian Influenza Virus in North America

evolutionary biology more details view paper
  • Downloaded 513 times
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    • Site-wide: 28,021 out of 83,578
    • In evolutionary biology: 1,916 out of 5,197
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  • Since beginning of last month:
    • Site-wide: 54,277 out of 83,578

A new massively-parallel transposon mutagenesis approach comparing multiple datasets identifies novel mechanisms of action and resistance to triclosan

microbiology more details view paper
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    • In microbiology: 1,839 out of 7,106
  • Year to date:
    • Site-wide: 35,325 out of 83,578
  • Since beginning of last month:
    • Site-wide: 23,355 out of 83,578

Porcine commensal Escherichia coli: A reservoir for class 1 integrons associated with IS26

genomics more details view paper
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    • Site-wide: 32,737 out of 83,578
    • In genomics: 3,243 out of 5,407
  • Year to date:
    • Site-wide: 73,717 out of 83,578
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    • Site-wide: 64,779 out of 83,578

Evaluation of ddRADseq for reduced representation metagenome sequencing

genomics more details view paper
  • Downloaded 364 times
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    • Site-wide: 41,284 out of 83,578
    • In genomics: 3,732 out of 5,407
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  • Since beginning of last month:
    • Site-wide: 65,416 out of 83,578

Genomes from Bacteria Associated with the Canine Oral Cavity: a Test Case for Automated Genome-Based Taxonomic Assignment

bioinformatics more details view paper
  • Downloaded 290 times
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    • Site-wide: 50,804 out of 83,578
    • In bioinformatics: 5,724 out of 8,009
  • Year to date:
    • Site-wide: 70,517 out of 83,578
  • Since beginning of last month:
    • Site-wide: 56,203 out of 83,578

Trial by phylogenetics - Evaluating the Multi-Species Coalescent for evolutionary inference on taxa with high levels of paralogy (Gonyaulacales, Dinophyceae).

evolutionary biology more details view paper
  • Downloaded 210 times
  • Download rankings, all-time:
    • Site-wide: 63,162 out of 83,578
    • In evolutionary biology: 4,236 out of 5,197
  • Year to date:
    • Site-wide: 52,098 out of 83,578
  • Since beginning of last month:
    • Site-wide: 79,935 out of 83,578

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