Author: Aaron E. Darling
- ORCiD: http://orcid.org/0000-0003-2397-7925
- Most recently observed institution: The ithree institute, University of Technology Sydney
Rankings
- All-time downloads: 23,498 (rank: 6,172 )
- Categories:
- bioinformatics: 16,533 (rank: 325 )
- evolutionary biology: 835 (rank: 7,442 (tie) )
- genomics: 4,982 (rank: 4,346 (tie) )
- microbiology: 1,148 (rank: 10,565 (tie) )
Downloads per author, site-wide
Preprints
Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software
bioinformatics more details view paper- Downloaded 6,952 times
- Download rankings, all-time:
- Site-wide: 1,123
- In bioinformatics: 77
- Year to date:
- Site-wide: 25,682
- Since beginning of last month:
- Site-wide: 22,404
Hackflex: low cost Illumina sequencing library construction for high sample counts
genomics more details view paper- Downloaded 4,062 times
- Download rankings, all-time:
- Site-wide: 2,331
- In genomics: 280
- Year to date:
- Site-wide: 1,999
- Since beginning of last month:
- Site-wide: 3,590
Alignathon: A competitive assessment of whole genome alignment methods.
bioinformatics more details view paper- Downloaded 3,295 times
- Download rankings, all-time:
- Site-wide: 3,177
- In bioinformatics: 346
- Year to date:
- Site-wide: 26,587
- Since beginning of last month:
- Site-wide: 76,032
CAMISIM: Simulating metagenomes and microbial communities
bioinformatics more details view paper- Downloaded 1,741 times
- Download rankings, all-time:
- Site-wide: 8,035
- In bioinformatics: 1,014
- Year to date:
- Site-wide: 22,272
- Since beginning of last month:
- Site-wide: 69,675
bin3C : Exploiting Hi-C sequencing data to accurately resolve metagenome-assembled genomes (MAGs)
bioinformatics more details view paper- Downloaded 801 times
- Download rankings, all-time:
- Site-wide: 25,486
- In bioinformatics: 3,060
- Year to date:
- Site-wide: 91,048
- Since beginning of last month:
- Site-wide: 53,453
Effective Online Bayesian Phylogenetics Via Sequential Monte Carlo With Guided Proposals
bioinformatics more details view paper- Downloaded 798 times
- Download rankings, all-time:
- Site-wide: 25,627
- In bioinformatics: 3,069
- Year to date:
- Site-wide: None
- Since beginning of last month:
- Site-wide: 120,093
Metagenomics Strain Resolution on Assembly Graphs
bioinformatics more details view paper- Downloaded 763 times
- Download rankings, all-time:
- Site-wide: 27,279
- In bioinformatics: 3,235
- Year to date:
- Site-wide: 12,393
- Since beginning of last month:
- Site-wide: 9,000
Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics
bioinformatics more details view paper- Downloaded 758 times
- Download rankings, all-time:
- Site-wide: 27,528
- In bioinformatics: 3,256
- Year to date:
- Site-wide: 103,604
- Since beginning of last month:
- Site-wide: 56,397
Sim3C: Simulation Of HiC And Meta3C Proximity Ligation Sequencing Technologies
bioinformatics more details view paper- Downloaded 662 times
- Download rankings, all-time:
- Site-wide: 33,139
- In bioinformatics: 3,783
- Year to date:
- Site-wide: 85,888
- Since beginning of last month:
- Site-wide: 74,860
A new massively-parallel transposon mutagenesis approach comparing multiple datasets identifies novel mechanisms of action and resistance to triclosan
microbiology more details view paper- Downloaded 622 times
- Download rankings, all-time:
- Site-wide: 35,933
- In microbiology: 2,160
- Year to date:
- Site-wide: 45,175
- Since beginning of last month:
- Site-wide: 40,750
The Impact of Migratory Flyways on the Spread of Avian Influenza Virus in North America
evolutionary biology more details view paper- Downloaded 562 times
- Download rankings, all-time:
- Site-wide: 40,865
- In evolutionary biology: 2,232
- Year to date:
- Site-wide: 117,858
- Since beginning of last month:
- Site-wide: 102,843
Porcine commensal Escherichia coli: A reservoir for class 1 integrons associated with IS26
genomics more details view paper- Downloaded 506 times
- Download rankings, all-time:
- Site-wide: 46,375
- In genomics: 3,753
- Year to date:
- Site-wide: 53,018
- Since beginning of last month:
- Site-wide: 103,667
Evaluation of ddRADseq for reduced representation metagenome sequencing
genomics more details view paper- Downloaded 414 times
- Download rankings, all-time:
- Site-wide: 57,732
- In genomics: 4,341
- Year to date:
- Site-wide: 107,671
- Since beginning of last month:
- Site-wide: 116,520
Tutorial: Assessing metagenomics software with the CAMI benchmarking toolkit
bioinformatics more details view paper- Downloaded 403 times
- Download rankings, all-time:
- Site-wide: 59,263
- In bioinformatics: 5,968
- Year to date:
- Site-wide: 8,814
- Since beginning of last month:
- Site-wide: 11,816
Genomes from Bacteria Associated with the Canine Oral Cavity: a Test Case for Automated Genome-Based Taxonomic Assignment
bioinformatics more details view paper- Downloaded 360 times
- Download rankings, all-time:
- Site-wide: 65,979
- In bioinformatics: 6,448
- Year to date:
- Site-wide: 80,028
- Since beginning of last month:
- Site-wide: 58,105
Post-weaning shifts in microbiome composition and metabolism revealed by over 25,000 pig gut metagenome assembled genomes
microbiology more details view paper- Downloaded 340 times
- Download rankings, all-time:
- Site-wide: 69,402
- In microbiology: 4,790
- Year to date:
- Site-wide: 9,631
- Since beginning of last month:
- Site-wide: 34,265
Trial by phylogenetics - Evaluating the Multi-Species Coalescent for evolutionary inference on taxa with high levels of paralogy (Gonyaulacales, Dinophyceae).
evolutionary biology more details view paper- Downloaded 273 times
- Download rankings, all-time:
- Site-wide: 81,942
- In evolutionary biology: 4,571
- Year to date:
- Site-wide: 57,410
- Since beginning of last month:
- Site-wide: 118,697
Community composition and development of the post-weaning piglet gut microbiome
microbiology more details view paper- Downloaded 186 times
- Download rankings, all-time:
- Site-wide: 100,323
- In microbiology: 7,523
- Year to date:
- Site-wide: 57,740
- Since beginning of last month:
- Site-wide: 67,270
PanLingua
News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
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