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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,472 bioRxiv papers from 277,337 authors.

Author: Wolfgang Huber

Rankings

  • All-time downloads: 55,916 (rank: 221 out of 277,417)
  • Categories:
    • bioengineering: 847 (rank: 1,327 (tie) out of 6,887)
    • bioinformatics: 38,642 (rank: 47 out of 24,391)
    • cancer biology: 2,172 (rank: 837 (tie) out of 17,187)
    • cell biology: 974 (rank: 2,591 (tie) out of 18,383)
    • genomics: 9,420 (rank: 1,074 out of 31,917)
    • molecular biology: 2,455 (rank: 406 out of 12,641)
    • systems biology: 1,406 (rank: 1,111 (tie) out of 8,416)

Downloads per author, site-wide

Preprints

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

bioinformatics more details view paper
  • Downloaded 17,859 times
  • Download rankings, all-time:
    • Site-wide: 37 out of 62,482
    • In bioinformatics: 4 out of 6,231
  • Year to date:
    • Site-wide: 1,421 out of 62,482
  • Since beginning of last month:
    • Site-wide: 4,480 out of 62,482

HTSeq - A Python framework to work with high-throughput sequencing data

bioinformatics more details view paper
  • Downloaded 7,685 times
  • Download rankings, all-time:
    • Site-wide: 174 out of 62,482
    • In bioinformatics: 29 out of 6,231
  • Year to date:
    • Site-wide: 11,155 out of 62,482
  • Since beginning of last month:
    • Site-wide: 15,243 out of 62,482

Multi-Omics factor analysis - a framework for unsupervised integration of multi-omic data sets

bioinformatics more details view paper
  • Downloaded 4,488 times
  • Download rankings, all-time:
    • Site-wide: 496 out of 62,482
    • In bioinformatics: 103 out of 6,231
  • Year to date:
    • Site-wide: 3,107 out of 62,482
  • Since beginning of last month:
    • Site-wide: 11,600 out of 62,482

Two independent modes of chromosome organization are revealed by cohesin removal

genomics more details view paper
  • Downloaded 3,838 times
  • Download rankings, all-time:
    • Site-wide: 678 out of 62,482
    • In genomics: 179 out of 4,297
  • Year to date:
    • Site-wide: 35,864 out of 62,482
  • Since beginning of last month:
    • Site-wide: 26,016 out of 62,482

Data-driven hypothesis weighting increases detection power in multiple testing

bioinformatics more details view paper
  • Downloaded 2,318 times
  • Download rankings, all-time:
    • Site-wide: 1,710 out of 62,482
    • In bioinformatics: 348 out of 6,231
  • Year to date:
    • Site-wide: 27,980 out of 62,482
  • Since beginning of last month:
    • Site-wide: 19,167 out of 62,482

Orchestrating Single-Cell Analysis with Bioconductor

genomics more details view paper
  • Downloaded 2,074 times
  • Download rankings, all-time:
    • Site-wide: 2,083 out of 62,482
    • In genomics: 445 out of 4,297
  • Year to date:
    • Site-wide: 367 out of 62,482
  • Since beginning of last month:
    • Site-wide: 1,968 out of 62,482

SomaticSignatures: Inferring Mutational Signatures from Single Nucleotide Variants

bioinformatics more details view paper
  • Downloaded 1,803 times
  • Download rankings, all-time:
    • Site-wide: 2,661 out of 62,482
    • In bioinformatics: 539 out of 6,231
  • Year to date:
    • Site-wide: 47,414 out of 62,482
  • Since beginning of last month:
    • Site-wide: 47,625 out of 62,482

Condensin II inactivation in interphase does not affect chromatin folding or gene expression

genomics more details view paper
  • Downloaded 1,789 times
  • Download rankings, all-time:
    • Site-wide: 2,700 out of 62,482
    • In genomics: 550 out of 4,297
  • Year to date:
    • Site-wide: 9,764 out of 62,482
  • Since beginning of last month:
    • Site-wide: 10,392 out of 62,482

Mutated SF3B1 is associated with transcript isoform changes of the genes UQCC and RPL31 both in CLLs and uveal melanomas

cancer biology more details view paper
  • Downloaded 1,746 times
  • Download rankings, all-time:
    • Site-wide: 2,814 out of 62,482
    • In cancer biology: 65 out of 2,055
  • Year to date:
    • Site-wide: 34,924 out of 62,482
  • Since beginning of last month:
    • Site-wide: 36,079 out of 62,482

Online resources for data exploration, visualization, and discovery for the Pan-Cancer Analysis of Whole Genomes project (PCAWG)

bioinformatics more details view paper
  • Downloaded 1,527 times
  • Download rankings, all-time:
    • Site-wide: 3,516 out of 62,482
    • In bioinformatics: 710 out of 6,231
  • Year to date:
    • Site-wide: 6,237 out of 62,482
  • Since beginning of last month:
    • Site-wide: 8,445 out of 62,482

Transcript Isoform Differences Across Human Tissues Are Predominantly Driven By Alternative Start And Termination Sites Of Transcription

genomics more details view paper
  • Downloaded 1,467 times
  • Download rankings, all-time:
    • Site-wide: 3,762 out of 62,482
    • In genomics: 698 out of 4,297
  • Year to date:
    • Site-wide: 18,635 out of 62,482
  • Since beginning of last month:
    • Site-wide: 20,028 out of 62,482

FourCSeq: Analysis of 4C sequencing data

bioinformatics more details view paper
  • Downloaded 1,326 times
  • Download rankings, all-time:
    • Site-wide: 4,436 out of 62,482
    • In bioinformatics: 874 out of 6,231
  • Year to date:
    • Site-wide: 24,744 out of 62,482
  • Since beginning of last month:
    • Site-wide: 21,875 out of 62,482

The small non-coding vault RNA1-1 acts as a riboregulator of autophagy

molecular biology more details view paper
  • Downloaded 1,237 times
  • Download rankings, all-time:
    • Site-wide: 4,970 out of 62,482
    • In molecular biology: 150 out of 1,961
  • Year to date:
    • Site-wide: 5,849 out of 62,482
  • Since beginning of last month:
    • Site-wide: 8,805 out of 62,482

Neural lineage induction reveals multi-scale dynamics of 3D chromatin organization

molecular biology more details view paper
  • Downloaded 1,218 times
  • Download rankings, all-time:
    • Site-wide: 5,090 out of 62,482
    • In molecular biology: 154 out of 1,961
  • Year to date:
    • Site-wide: 49,263 out of 62,482
  • Since beginning of last month:
    • Site-wide: 56,167 out of 62,482

Non-parametric analysis of thermal proteome profiles reveals novel drug-binding proteins

bioinformatics more details view paper
  • Downloaded 1,021 times
  • Download rankings, all-time:
    • Site-wide: 6,837 out of 62,482
    • In bioinformatics: 1,247 out of 6,231
  • Year to date:
    • Site-wide: 2,684 out of 62,482
  • Since beginning of last month:
    • Site-wide: 1,734 out of 62,482

Reduced proteasome activity in the aging brain results in ribosome stoichiometry loss and aggregation

systems biology more details view paper
  • Downloaded 887 times
  • Download rankings, all-time:
    • Site-wide: 8,555 out of 62,482
    • In systems biology: 247 out of 1,774
  • Year to date:
    • Site-wide: 1,797 out of 62,482
  • Since beginning of last month:
    • Site-wide: 10,710 out of 62,482

Biological Plasticity Rescues Target Activity in CRISPR Knockouts

bioengineering more details view paper
  • Downloaded 847 times
  • Download rankings, all-time:
    • Site-wide: 9,186 out of 62,482
    • In bioengineering: 159 out of 1,239
  • Year to date:
    • Site-wide: 1,955 out of 62,482
  • Since beginning of last month:
    • Site-wide: 2,717 out of 62,482

Modelling asymmetric count ratios in CRISPR screens to decrease experiment size and improve phenotype detection

bioinformatics more details view paper
  • Downloaded 615 times
  • Download rankings, all-time:
    • Site-wide: 14,531 out of 62,482
    • In bioinformatics: 2,316 out of 6,231
  • Year to date:
    • Site-wide: 3,430 out of 62,482
  • Since beginning of last month:
    • Site-wide: 2,792 out of 62,482

A combinatorial extracellular code tunes the intracellular signaling network activity to distinct cellular responses

cell biology more details view paper
  • Downloaded 529 times
  • Download rankings, all-time:
    • Site-wide: 17,783 out of 62,482
    • In cell biology: 749 out of 2,982
  • Year to date:
    • Site-wide: 27,442 out of 62,482
  • Since beginning of last month:
    • Site-wide: 23,376 out of 62,482

Proteome-wide solubility and thermal stability profiling reveals distinct regulatory roles for ATP

systems biology more details view paper
  • Downloaded 519 times
  • Download rankings, all-time:
    • Site-wide: 18,237 out of 62,482
    • In systems biology: 557 out of 1,774
  • Year to date:
    • Site-wide: 11,024 out of 62,482
  • Since beginning of last month:
    • Site-wide: 58,439 out of 62,482

Proteome thermal stability reflects organ physiology and identifies drug-target engagement in vivo

cell biology more details view paper
  • Downloaded 445 times
  • Download rankings, all-time:
    • Site-wide: 21,970 out of 62,482
    • In cell biology: 987 out of 2,982
  • Year to date:
    • Site-wide: 8,434 out of 62,482
  • Since beginning of last month:
    • Site-wide: 29,960 out of 62,482

MDM4 is an essential disease driver targeted by 1q gain in Burkitt lymphoma

cancer biology more details view paper
  • Downloaded 426 times
  • Download rankings, all-time:
    • Site-wide: 23,057 out of 62,482
    • In cancer biology: 708 out of 2,055
  • Year to date:
    • Site-wide: 16,193 out of 62,482
  • Since beginning of last month:
    • Site-wide: 13,211 out of 62,482

Developmental gene expression differences between humans and mammalian models

genomics more details view paper
  • Downloaded 252 times
  • Download rankings, all-time:
    • Site-wide: 37,711 out of 62,482
    • In genomics: 3,354 out of 4,297
  • Year to date:
    • Site-wide: 14,478 out of 62,482
  • Since beginning of last month:
    • Site-wide: 3,494 out of 62,482

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