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Author: Chris Sander

Rankings

  • All-time downloads: 53,319 (rank: 2,607 )
  • Categories:
    • bioinformatics: 14,434 (rank: 417 )
    • cancer biology: 11,397 (rank: 171 )
    • epidemiology: 340 (rank: 18,754 (tie) )
    • evolutionary biology: 1,431 (rank: 4,107 (tie) )
    • genomics: 12,119 (rank: 1,406 )
    • systems biology: 13,598 (rank: 172 )

Downloads per author, site-wide

Preprints

Comparing cancer cell lines and tumor samples by genomic profiles

cancer biology more details view paper
  • Downloaded 6,388 times
  • Download rankings, all-time:
    • Site-wide: 1,418
    • In cancer biology: 16
  • Year to date:
    • Site-wide: 7,649
  • Since beginning of last month:
    • Site-wide: 8,979

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

genomics more details view paper
  • Downloaded 5,473 times
  • Download rankings, all-time:
    • Site-wide: 1,762
    • In genomics: 168
  • Year to date:
    • Site-wide: 18,428
  • Since beginning of last month:
    • Site-wide: 17,415

Mitochondrial DNA Copy Number Variation Across Human Cancers

genomics more details view paper
  • Downloaded 4,942 times
  • Download rankings, all-time:
    • Site-wide: 2,010
    • In genomics: 201
  • Year to date:
    • Site-wide: 41,020
  • Since beginning of last month:
    • Site-wide: 43,998

EVfold.org: Evolutionary Couplings and Protein 3D Structure Prediction

bioinformatics more details view paper
  • Downloaded 4,226 times
  • Download rankings, all-time:
    • Site-wide: 2,525
    • In bioinformatics: 224
  • Year to date:
    • Site-wide: 9,741
  • Since beginning of last month:
    • Site-wide: 13,115

COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms

systems biology more details view paper
  • Downloaded 2,819 times
  • Download rankings, all-time:
    • Site-wide: 4,515
    • In systems biology: 75
  • Year to date:
    • Site-wide: 1,040
  • Since beginning of last month:
    • Site-wide: 1,226

MatchMiner: An open source computational platform for real-time matching of cancer patients to precision medicine clinical trials using genomic and clinical criteria

bioinformatics more details view paper
  • Downloaded 2,441 times
  • Download rankings, all-time:
    • Site-wide: 5,597
    • In bioinformatics: 631
  • Year to date:
    • Site-wide: 26,183
  • Since beginning of last month:
    • Site-wide: 25,322

Sequence co-evolution gives 3D contacts and structures of protein complexes

bioinformatics more details view paper
  • Downloaded 2,317 times
  • Download rankings, all-time:
    • Site-wide: 6,041
    • In bioinformatics: 687
  • Year to date:
    • Site-wide: 61,874
  • Since beginning of last month:
    • Site-wide: 92,029

Interpretable Machine Learning for Perturbation Biology

systems biology more details view paper
  • Downloaded 2,273 times
  • Download rankings, all-time:
    • Site-wide: 6,206
    • In systems biology: 107
  • Year to date:
    • Site-wide: 15,463
  • Since beginning of last month:
    • Site-wide: 19,165

Causal interactions from proteomic profiles: molecular data meets pathway knowledge

systems biology more details view paper
  • Downloaded 1,891 times
  • Download rankings, all-time:
    • Site-wide: 8,133
    • In systems biology: 143
  • Year to date:
    • Site-wide: 12,867
  • Since beginning of last month:
    • Site-wide: 12,782

Rapid proteotyping reveals cancer biology and drug response determinants in the NCI-60 cells

systems biology more details view paper
  • Downloaded 1,757 times
  • Download rankings, all-time:
    • Site-wide: 9,097
    • In systems biology: 174
  • Year to date:
    • Site-wide: 54,645
  • Since beginning of last month:
    • Site-wide: 61,588

Protein Domain Hotspots Reveal Functional Mutations across Genes in Cancer

genomics more details view paper
  • Downloaded 1,704 times
  • Download rankings, all-time:
    • Site-wide: 9,532
    • In genomics: 1,041
  • Year to date:
    • Site-wide: 78,255
  • Since beginning of last month:
    • Site-wide: 63,470

3D protein structure from genetic epistasis experiments

systems biology more details view paper
  • Downloaded 1,542 times
  • Download rankings, all-time:
    • Site-wide: 11,019
    • In systems biology: 208
  • Year to date:
    • Site-wide: 42,814
  • Since beginning of last month:
    • Site-wide: 41,787

Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations

cancer biology more details view paper
  • Downloaded 1,440 times
  • Download rankings, all-time:
    • Site-wide: 12,159
    • In cancer biology: 258
  • Year to date:
    • Site-wide: 69,862
  • Since beginning of last month:
    • Site-wide: 61,669

Protein structure from experimental evolution

evolutionary biology more details view paper
  • Downloaded 1,431 times
  • Download rankings, all-time:
    • Site-wide: 12,286
    • In evolutionary biology: 429
  • Year to date:
    • Site-wide: 70,756
  • Since beginning of last month:
    • Site-wide: 67,093

Perturbation biology models predict c-Myc as an effective co-target in RAF inhibitor resistant melanoma cells

cancer biology more details view paper
  • Downloaded 1,414 times
  • Download rankings, all-time:
    • Site-wide: 12,527
    • In cancer biology: 266
  • Year to date:
    • Site-wide: 62,218
  • Since beginning of last month:
    • Site-wide: 87,010

Extensive Decoupling of Metabolic Genes in Cancer

systems biology more details view paper
  • Downloaded 1,372 times
  • Download rankings, all-time:
    • Site-wide: 13,109
    • In systems biology: 250
  • Year to date:
    • Site-wide: 87,670
  • Since beginning of last month:
    • Site-wide: 87,782

Cancer-associated recurrent mutations in RNase III domains of DICER1

cancer biology more details view paper
  • Downloaded 1,138 times
  • Download rankings, all-time:
    • Site-wide: 17,363
    • In cancer biology: 396
  • Year to date:
    • Site-wide: 86,875
  • Since beginning of last month:
    • Site-wide: 96,392

Integrative analysis of pharmacogenomics in major cancer cell line databases using CellMinerCDB

bioinformatics more details view paper
  • Downloaded 1,028 times
  • Download rankings, all-time:
    • Site-wide: 20,193
    • In bioinformatics: 2,410
  • Year to date:
    • Site-wide: 81,743
  • Since beginning of last month:
    • Site-wide: 75,441

Protein Profiling In Cancer Cell Lines And Tumor Tissue Using Reverse Phase Protein Arrays

systems biology more details view paper
  • Downloaded 1,006 times
  • Download rankings, all-time:
    • Site-wide: 20,828
    • In systems biology: 424
  • Year to date:
    • Site-wide: 58,205
  • Since beginning of last month:
    • Site-wide: 62,783

Perturbation biology links temporal protein changes to drug responses in a melanoma cell line

systems biology more details view paper
  • Downloaded 938 times
  • Download rankings, all-time:
    • Site-wide: 23,057
    • In systems biology: 476
  • Year to date:
    • Site-wide: 118,602
  • Since beginning of last month:
    • Site-wide: 121,852

The EVcouplings Python framework for coevolutionary sequence analysis

bioinformatics more details view paper
  • Downloaded 832 times
  • Download rankings, all-time:
    • Site-wide: 27,311
    • In bioinformatics: 3,174
  • Year to date:
    • Site-wide: 88,576
  • Since beginning of last month:
    • Site-wide: 67,057

Accurate prediction of transmembrane β-barrel proteins from sequences

bioinformatics more details view paper
  • Downloaded 799 times
  • Download rankings, all-time:
    • Site-wide: 28,913
    • In bioinformatics: 3,318
  • Year to date:
    • Site-wide: 111,222
  • Since beginning of last month:
    • Site-wide: 112,082

Adaptive response to BET inhibition induces therapeutic vulnerability to MCL1 inhibitors in breast cancer

cancer biology more details view paper
  • Downloaded 672 times
  • Download rankings, all-time:
    • Site-wide: 36,658
    • In cancer biology: 984
  • Year to date:
    • Site-wide: 44,832
  • Since beginning of last month:
    • Site-wide: 41,462

PaxtoolsR: Pathway Analysis in R Using Pathway Commons

bioinformatics more details view paper
  • Downloaded 660 times
  • Download rankings, all-time:
    • Site-wide: 37,570
    • In bioinformatics: 4,136
  • Year to date:
    • Site-wide: 111,239
  • Since beginning of last month:
    • Site-wide: 129,712

AlignmentViewer: Sequence Analysis of Large Protein Families

bioinformatics more details view paper
  • Downloaded 622 times
  • Download rankings, all-time:
    • Site-wide: 40,496
    • In bioinformatics: 4,389
  • Year to date:
    • Site-wide: 43,003
  • Since beginning of last month:
    • Site-wide: 47,058

3D RNA from evolutionary couplings

bioinformatics more details view paper
  • Downloaded 498 times
  • Download rankings, all-time:
    • Site-wide: 53,107
    • In bioinformatics: 5,415
  • Year to date:
    • Site-wide: 91,008
  • Since beginning of last month:
    • Site-wide: 107,302

PredictProtein - Predicting Protein Structure and Function for 29 Years

bioinformatics more details view paper
  • Downloaded 368 times
  • Download rankings, all-time:
    • Site-wide: 72,270
    • In bioinformatics: 6,820
  • Year to date:
    • Site-wide: 4,593
  • Since beginning of last month:
    • Site-wide: 2,913

Precision combination therapies based on recurrent oncogenic co-alterations

cancer biology more details view paper
  • Downloaded 345 times
  • Download rankings, all-time:
    • Site-wide: 76,288
    • In cancer biology: 2,248
  • Year to date:
    • Site-wide: 67,741
  • Since beginning of last month:
    • Site-wide: 58,649

Disulfiram associated with lower risk of Covid-19: a retrospective cohort study

epidemiology more details view paper
  • Downloaded 340 times
  • Download rankings, all-time:
    • Site-wide: 77,229
    • In epidemiology: 3,225
  • Year to date:
    • Site-wide: 5,215
  • Since beginning of last month:
    • Site-wide: 1,510

Pathway Commons: 2019 Update

bioinformatics more details view paper
  • Downloaded 275 times
  • Download rankings, all-time:
    • Site-wide: 90,600
    • In bioinformatics: 7,995
  • Year to date:
    • Site-wide: 108,962
  • Since beginning of last month:
    • Site-wide: 123,464

NetBoxR: Automated Discovery of Biological Process Modules by Network Analysis in R

bioinformatics more details view paper
  • Downloaded 196 times
  • Download rankings, all-time:
    • Site-wide: 108,171
    • In bioinformatics: 9,054
  • Year to date:
    • Site-wide: 106,234
  • Since beginning of last month:
    • Site-wide: 132,898

Capturing scientific knowledge in computable form

bioinformatics more details view paper
  • Downloaded 172 times
  • Download rankings, all-time:
    • Site-wide: 113,244
    • In bioinformatics: 9,365
  • Year to date:
    • Site-wide: 13,500
  • Since beginning of last month:
    • Site-wide: 3,951

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