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Author: Chris Sander

  • ORCiD: http://orcid.org/0000-0001-6059-6270
  • Most recently observed institution: cBio Center, Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, 02215, USA; Department of Cell Biology, Harvard Medical School, Boston, MA, 02215, USA

Rankings

  • All-time downloads: 45,062 (rank: 716 out of 360,279)
  • Categories:
    • bioinformatics: 11,812 (rank: 402 out of 31,168)
    • cancer biology: 9,884 (rank: 126 out of 24,449)
    • evolutionary biology: 1,278 (rank: 3,235 (tie) out of 18,691)
    • genomics: 11,359 (rank: 1,125 out of 39,022)
    • systems biology: 10,729 (rank: 164 out of 10,774)

Downloads per author, site-wide

Preprints

Comparing cancer cell lines and tumor samples by genomic profiles

cancer biology more details view paper
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    • Site-wide: 518 out of 83,609
    • In cancer biology: 11 out of 2,916
  • Year to date:
    • Site-wide: 7,495 out of 83,609
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    • Site-wide: 7,056 out of 83,609

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

genomics more details view paper
  • Downloaded 5,050 times
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    • Site-wide: 656 out of 83,609
    • In genomics: 136 out of 5,408
  • Year to date:
    • Site-wide: 3,339 out of 83,609
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    • Site-wide: 5,720 out of 83,609

Mitochondrial DNA Copy Number Variation Across Human Cancers

genomics more details view paper
  • Downloaded 4,699 times
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    • Site-wide: 755 out of 83,609
    • In genomics: 163 out of 5,408
  • Year to date:
    • Site-wide: 6,571 out of 83,609
  • Since beginning of last month:
    • Site-wide: 9,032 out of 83,609

EVfold.org: Evolutionary Couplings and Protein 3D Structure Prediction

bioinformatics more details view paper
  • Downloaded 3,472 times
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    • In bioinformatics: 236 out of 8,013
  • Year to date:
    • Site-wide: 4,490 out of 83,609
  • Since beginning of last month:
    • Site-wide: 3,960 out of 83,609

Sequence co-evolution gives 3D contacts and structures of protein complexes

bioinformatics more details view paper
  • Downloaded 2,182 times
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    • Site-wide: 2,907 out of 83,609
    • In bioinformatics: 535 out of 8,013
  • Year to date:
    • Site-wide: 63,422 out of 83,609
  • Since beginning of last month:
    • Site-wide: 64,728 out of 83,609

MatchMiner: An open source computational platform for real-time matching of cancer patients to precision medicine clinical trials using genomic and clinical criteria

bioinformatics more details view paper
  • Downloaded 2,066 times
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    • Site-wide: 3,190 out of 83,609
    • In bioinformatics: 594 out of 8,013
  • Year to date:
    • Site-wide: 11,462 out of 83,609
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    • Site-wide: 12,955 out of 83,609

Accelerating Protein Design Using Autoregressive Generative Models

systems biology more details view paper
  • Downloaded 2,008 times
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    • Site-wide: 3,333 out of 83,609
    • In systems biology: 85 out of 2,212
  • Year to date:
    • Site-wide: 1,508 out of 83,609
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    • Site-wide: 2,404 out of 83,609

Protein Domain Hotspots Reveal Functional Mutations across Genes in Cancer

genomics more details view paper
  • Downloaded 1,610 times
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    • In genomics: 824 out of 5,408
  • Year to date:
    • Site-wide: 65,052 out of 83,609
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    • Site-wide: 64,518 out of 83,609

Rapid proteotyping reveals cancer biology and drug response determinants in the NCI-60 cells

systems biology more details view paper
  • Downloaded 1,541 times
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    • Site-wide: 5,187 out of 83,609
    • In systems biology: 135 out of 2,212
  • Year to date:
    • Site-wide: 19,133 out of 83,609
  • Since beginning of last month:
    • Site-wide: 23,829 out of 83,609

Interpretable Machine Learning for Perturbation Biology

systems biology more details view paper
  • Downloaded 1,440 times
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    • Site-wide: 5,784 out of 83,609
    • In systems biology: 160 out of 2,212
  • Year to date:
    • Site-wide: 1,164 out of 83,609
  • Since beginning of last month:
    • Site-wide: 2,395 out of 83,609

3D protein structure from genetic epistasis experiments

systems biology more details view paper
  • Downloaded 1,350 times
  • Download rankings, all-time:
    • Site-wide: 6,450 out of 83,609
    • In systems biology: 177 out of 2,212
  • Year to date:
    • Site-wide: 37,133 out of 83,609
  • Since beginning of last month:
    • Site-wide: 23,089 out of 83,609

Causal interactions from proteomic profiles: molecular data meets pathway knowledge

systems biology more details view paper
  • Downloaded 1,335 times
  • Download rankings, all-time:
    • Site-wide: 6,587 out of 83,609
    • In systems biology: 181 out of 2,212
  • Year to date:
    • Site-wide: 12,532 out of 83,609
  • Since beginning of last month:
    • Site-wide: 9,589 out of 83,609

Perturbation biology models predict c-Myc as an effective co-target in RAF inhibitor resistant melanoma cells

cancer biology more details view paper
  • Downloaded 1,311 times
  • Download rankings, all-time:
    • Site-wide: 6,772 out of 83,609
    • In cancer biology: 182 out of 2,916
  • Year to date:
    • Site-wide: 74,397 out of 83,609
  • Since beginning of last month:
    • Site-wide: 79,748 out of 83,609

Extensive Decoupling of Metabolic Genes in Cancer

systems biology more details view paper
  • Downloaded 1,310 times
  • Download rankings, all-time:
    • Site-wide: 6,788 out of 83,609
    • In systems biology: 188 out of 2,212
  • Year to date:
    • Site-wide: 40,945 out of 83,609
  • Since beginning of last month:
    • Site-wide: 64,833 out of 83,609

Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations

cancer biology more details view paper
  • Downloaded 1,306 times
  • Download rankings, all-time:
    • Site-wide: 6,827 out of 83,609
    • In cancer biology: 184 out of 2,916
  • Year to date:
    • Site-wide: 79,630 out of 83,609
  • Since beginning of last month:
    • Site-wide: 80,681 out of 83,609

Protein structure from experimental evolution

evolutionary biology more details view paper
  • Downloaded 1,278 times
  • Download rankings, all-time:
    • Site-wide: 7,087 out of 83,609
    • In evolutionary biology: 369 out of 5,198
  • Year to date:
    • Site-wide: 14,119 out of 83,609
  • Since beginning of last month:
    • Site-wide: 20,270 out of 83,609

Cancer-associated recurrent mutations in RNase III domains of DICER1

cancer biology more details view paper
  • Downloaded 1,043 times
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    • Site-wide: 9,876 out of 83,609
    • In cancer biology: 272 out of 2,916
  • Year to date:
    • Site-wide: 52,163 out of 83,609
  • Since beginning of last month:
    • Site-wide: 67,475 out of 83,609

Integrative analysis of pharmacogenomics in major cancer cell line databases using CellMinerCDB

bioinformatics more details view paper
  • Downloaded 936 times
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    • Site-wide: 11,750 out of 83,609
    • In bioinformatics: 1,915 out of 8,013
  • Year to date:
    • Site-wide: 42,373 out of 83,609
  • Since beginning of last month:
    • Site-wide: 31,761 out of 83,609

Protein Profiling In Cancer Cell Lines And Tumor Tissue Using Reverse Phase Protein Arrays

systems biology more details view paper
  • Downloaded 876 times
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    • Site-wide: 13,044 out of 83,609
    • In systems biology: 361 out of 2,212
  • Year to date:
    • Site-wide: 45,412 out of 83,609
  • Since beginning of last month:
    • Site-wide: 51,080 out of 83,609

Perturbation biology links temporal protein changes to drug responses in a melanoma cell line

systems biology more details view paper
  • Downloaded 869 times
  • Download rankings, all-time:
    • Site-wide: 13,172 out of 83,609
    • In systems biology: 369 out of 2,212
  • Year to date:
    • Site-wide: 12,650 out of 83,609
  • Since beginning of last month:
    • Site-wide: 71,115 out of 83,609

Accurate prediction of transmembrane β-barrel proteins from sequences

bioinformatics more details view paper
  • Downloaded 759 times
  • Download rankings, all-time:
    • Site-wide: 16,208 out of 83,609
    • In bioinformatics: 2,493 out of 8,013
  • Year to date:
    • Site-wide: 72,599 out of 83,609
  • Since beginning of last month:
    • Site-wide: 73,379 out of 83,609

The EVcouplings Python framework for coevolutionary sequence analysis

bioinformatics more details view paper
  • Downloaded 715 times
  • Download rankings, all-time:
    • Site-wide: 17,739 out of 83,609
    • In bioinformatics: 2,676 out of 8,013
  • Year to date:
    • Site-wide: 33,756 out of 83,609
  • Since beginning of last month:
    • Site-wide: 27,176 out of 83,609

PaxtoolsR: Pathway Analysis in R Using Pathway Commons

bioinformatics more details view paper
  • Downloaded 593 times
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    • Site-wide: 23,233 out of 83,609
    • In bioinformatics: 3,282 out of 8,013
  • Year to date:
    • Site-wide: 79,215 out of 83,609
  • Since beginning of last month:
    • Site-wide: 77,631 out of 83,609

AlignmentViewer: Sequence Analysis of Large Protein Families

bioinformatics more details view paper
  • Downloaded 449 times
  • Download rankings, all-time:
    • Site-wide: 32,952 out of 83,609
    • In bioinformatics: 4,208 out of 8,013
  • Year to date:
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  • Since beginning of last month:
    • Site-wide: 29,017 out of 83,609

3D RNA from evolutionary couplings

bioinformatics more details view paper
  • Downloaded 435 times
  • Download rankings, all-time:
    • Site-wide: 34,214 out of 83,609
    • In bioinformatics: 4,325 out of 8,013
  • Year to date:
    • Site-wide: 76,081 out of 83,609
  • Since beginning of last month:
    • Site-wide: 66,722 out of 83,609

Adaptive response to BET inhibition induces therapeutic vulnerability to MCL1 inhibitors in breast cancer

cancer biology more details view paper
  • Downloaded 430 times
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    • Site-wide: 34,644 out of 83,609
    • In cancer biology: 1,106 out of 2,916
  • Year to date:
    • Site-wide: 11,760 out of 83,609
  • Since beginning of last month:
    • Site-wide: 13,674 out of 83,609

Pathway Commons: 2019 Update

bioinformatics more details view paper
  • Downloaded 205 times
  • Download rankings, all-time:
    • Site-wide: 64,084 out of 83,609
    • In bioinformatics: 6,677 out of 8,013
  • Year to date:
    • Site-wide: 60,876 out of 83,609
  • Since beginning of last month:
    • Site-wide: 68,937 out of 83,609

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