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Author: Marius Pachitariu

Rankings

  • All-time downloads: 75,084 (rank: 1,606 out of 510,628)
  • Categories:
    • bioinformatics: 6,603 (rank: 1,341 (tie) out of 36,842)
    • neuroscience: 68,481 (rank: 15 out of 73,694)

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Preprints

Suite2p: beyond 10,000 neurons with standard two-photon microscopy

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    • In neuroscience: 17 out of 18,600
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    • Site-wide: 2,592 out of 118,373

Spontaneous behaviors drive multidimensional, brain-wide population activity

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    • In neuroscience: 22 out of 18,600
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    • Site-wide: 11,205 out of 118,373

Kilosort: realtime spike-sorting for extracellular electrophysiology with hundreds of channels

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    • In neuroscience: 26 out of 18,600
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    • Site-wide: 2,413 out of 118,373
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    • Site-wide: 3,118 out of 118,373

High-dimensional geometry of population responses in visual cortex

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    • In neuroscience: 34 out of 18,600
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Cellpose: a generalist algorithm for cellular segmentation

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    • In bioinformatics: 80 out of 9,580
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High precision coding in visual cortex

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    • In neuroscience: 68 out of 18,600
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A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas

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    • Site-wide: 5,261 out of 118,373

Vision and locomotion shape the interactions between neuron types in mouse visual cortex

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    • In neuroscience: 304 out of 18,600
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    • Site-wide: 88,571 out of 118,373

Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings

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    • In neuroscience: 362 out of 18,600
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    • Site-wide: 1,903 out of 118,373
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    • Site-wide: 190 out of 118,373

Retinal outputs depend on behavioural state

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    • In neuroscience: 451 out of 18,600
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  • Since beginning of last month:
    • Site-wide: 65,821 out of 118,373

Robustness of spike deconvolution for calcium imaging of neural spiking

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    • In neuroscience: 646 out of 18,600
  • Year to date:
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  • Since beginning of last month:
    • Site-wide: 73,706 out of 118,373

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data

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    • Site-wide: 6,783 out of 118,373
    • In neuroscience: 724 out of 18,600
  • Year to date:
    • Site-wide: 28,222 out of 118,373
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    • Site-wide: 30,555 out of 118,373

Inhibitory control of shared variability in cortical networks

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    • In neuroscience: 739 out of 18,600
  • Year to date:
    • Site-wide: 53,654 out of 118,373
  • Since beginning of last month:
    • Site-wide: 71,112 out of 118,373

Visual motion computation in recurrent neural networks

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    • Site-wide: 15,990 out of 118,373
    • In neuroscience: 2,045 out of 18,600
  • Year to date:
    • Site-wide: 101,391 out of 118,373
  • Since beginning of last month:
    • Site-wide: None out of 118,373

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