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Author: Marius Pachitariu

Rankings

  • All-time downloads: 67,195 (rank: 555 out of 398,135)
  • Categories:
    • bioinformatics: 4,628 (rank: 2,066 (tie) out of 33,947)
    • neuroscience: 62,567 (rank: 15 out of 66,637)

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Preprints

Suite2p: beyond 10,000 neurons with standard two-photon microscopy

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Spontaneous behaviors drive multidimensional, brain-wide population activity

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Kilosort: realtime spike-sorting for extracellular electrophysiology with hundreds of channels

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High-dimensional geometry of population responses in visual cortex

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High precision coding in visual cortex

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Cellpose: a generalist algorithm for cellular segmentation

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Vision and locomotion shape the interactions between neuron types in mouse visual cortex

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A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas

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Retinal outputs depend on behavioural state

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Robustness of spike deconvolution for calcium imaging of neural spiking

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    • In neuroscience: 584 out of 16,604
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    • Site-wide: 52,761 out of 93,322

Inhibitory control of shared variability in cortical networks

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    • In neuroscience: 679 out of 16,604
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    • Site-wide: 45,406 out of 93,322

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data

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    • In neuroscience: 698 out of 16,604
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Visual motion computation in recurrent neural networks

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    • In neuroscience: 1,783 out of 16,604
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  • Since beginning of last month:
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