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Author: Aristotelis Tsirigos

Rankings

  • All-time downloads: 32,827 (rank: 3,983 )
  • Categories:
    • biochemistry: 582 (rank: 8,090 (tie) )
    • bioinformatics: 10,532 (rank: 637 )
    • cancer biology: 12,778 (rank: 142 )
    • developmental biology: 635 (rank: 6,166 (tie) )
    • genomics: 2,768 (rank: 8,020 )
    • health informatics: 534 (rank: 987 (tie) )
    • molecular biology: 2,502 (rank: 1,381 (tie) )
    • neuroscience: 674 (rank: 30,556 (tie) )
    • pathology: 1,822 (rank: 542 (tie) )

Downloads per author, site-wide

Preprints

Classification and Mutation Prediction from Non-Small Cell Lung Cancer Histopathology Images using Deep Learning

cancer biology more details view paper
  • Downloaded 10,712 times
  • Download rankings, all-time:
    • Site-wide: 634
    • In cancer biology: 6
  • Year to date:
    • Site-wide: 2,699
  • Since beginning of last month:
    • Site-wide: 1,365

HiC-bench: comprehensive and reproducible Hi-C data analysis designed for parameter exploration and benchmarking

bioinformatics more details view paper
  • Downloaded 4,080 times
  • Download rankings, all-time:
    • Site-wide: 2,322
    • In bioinformatics: 217
  • Year to date:
    • Site-wide: 53,596
  • Since beginning of last month:
    • Site-wide: 87,508

lncRNA-screen: an interactive platform for computationally screening long non-coding RNAs in large genomics datasets

bioinformatics more details view paper
  • Downloaded 3,195 times
  • Download rankings, all-time:
    • Site-wide: 3,334
    • In bioinformatics: 364
  • Year to date:
    • Site-wide: 60,600
  • Since beginning of last month:
    • Site-wide: 40,280

Dynamic 3D chromosomal landscapes in acute leukemia

cancer biology more details view paper
  • Downloaded 1,764 times
  • Download rankings, all-time:
    • Site-wide: 7,883
    • In cancer biology: 140
  • Year to date:
    • Site-wide: 54,283
  • Since beginning of last month:
    • Site-wide: 26,134

KLF4 binding is involved in the organization and regulation of 3D enhancer networks during acquisition and maintenance of pluripotency

molecular biology more details view paper
  • Downloaded 1,696 times
  • Download rankings, all-time:
    • Site-wide: 8,391
    • In molecular biology: 220
  • Year to date:
    • Site-wide: 95,423
  • Since beginning of last month:
    • Site-wide: 55,520

Stratification of TAD boundaries identified in reproducible Hi-C contact matrices reveals preferential insulation of super-enhancers by strong boundaries

bioinformatics more details view paper
  • Downloaded 1,464 times
  • Download rankings, all-time:
    • Site-wide: 10,465
    • In bioinformatics: 1,320
  • Year to date:
    • Site-wide: 85,933
  • Since beginning of last month:
    • Site-wide: 96,814

NSD2 overexpression drives clustered chromatin and transcriptional changes in a subset of insulated domains

genomics more details view paper
  • Downloaded 1,111 times
  • Download rankings, all-time:
    • Site-wide: 15,897
    • In genomics: 1,699
  • Year to date:
    • Site-wide: 42,720
  • Since beginning of last month:
    • Site-wide: 50,259

Efficient pan-cancer whole-slide image classification and outlier detection using convolutional neural networks

pathology more details view paper
  • Downloaded 1,032 times
  • Download rankings, all-time:
    • Site-wide: 17,732
    • In pathology: 69
  • Year to date:
    • Site-wide: 24,488
  • Since beginning of last month:
    • Site-wide: 23,312

ChIPSeqSpike: A R/Bioconductor package for ChIP-Seq data scaling according to spike-in control

bioinformatics more details view paper
  • Downloaded 991 times
  • Download rankings, all-time:
    • Site-wide: 18,891
    • In bioinformatics: 2,326
  • Year to date:
    • Site-wide: 35,561
  • Since beginning of last month:
    • Site-wide: 30,857

Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation

genomics more details view paper
  • Downloaded 937 times
  • Download rankings, all-time:
    • Site-wide: 20,446
    • In genomics: 2,076
  • Year to date:
    • Site-wide: 45,447
  • Since beginning of last month:
    • Site-wide: 108,321

Mitotic retention of H3K27 acetylation promotes rapid topological and transcriptional resetting of stem cell-related genes and enhancers upon G1 entry

molecular biology more details view paper
  • Downloaded 806 times
  • Download rankings, all-time:
    • Site-wide: 25,344
    • In molecular biology: 706
  • Year to date:
    • Site-wide: 10,272
  • Since beginning of last month:
    • Site-wide: 19,570

A Deep Learning Approach for Rapid Mutational Screening in Melanoma

pathology more details view paper
  • Downloaded 790 times
  • Download rankings, all-time:
    • Site-wide: 26,060
    • In pathology: 101
  • Year to date:
    • Site-wide: 19,415
  • Since beginning of last month:
    • Site-wide: 48,915

N-BLR, a primate-specific non-coding transcript, modulates the epithelial-to-mesenchymal transition and leads to colorectal cancer invasion and migration

genomics more details view paper
  • Downloaded 720 times
  • Download rankings, all-time:
    • Site-wide: 29,669
    • In genomics: 2,723
  • Year to date:
    • Site-wide: 114,699
  • Since beginning of last month:
    • Site-wide: 99,082

The translatome of adult cortical axons is regulated by learning in vivo

neuroscience more details view paper
  • Downloaded 674 times
  • Download rankings, all-time:
    • Site-wide: 32,413
    • In neuroscience: 4,581
  • Year to date:
    • Site-wide: 26,727
  • Since beginning of last month:
    • Site-wide: 68,840

Context-dependent requirement of H3K9 methyltransferase activity during cellular reprogramming to iPSCs

developmental biology more details view paper
  • Downloaded 635 times
  • Download rankings, all-time:
    • Site-wide: 35,126
    • In developmental biology: 778
  • Year to date:
    • Site-wide: 46,381
  • Since beginning of last month:
    • Site-wide: 59,222

A CRISPR Screen Identifies Myc-associated Zinc Finger Protein (MAZ) as an Insulator Functioning at CTCF boundaries in Hox Clusters

biochemistry more details view paper
  • Downloaded 582 times
  • Download rankings, all-time:
    • Site-wide: 39,171
    • In biochemistry: 972
  • Year to date:
    • Site-wide: 37,931
  • Since beginning of last month:
    • Site-wide: 6,231

Microbial contributions to oxalate metabolism in health and disease

health informatics more details view paper
  • Downloaded 534 times
  • Download rankings, all-time:
    • Site-wide: 43,678
    • In health informatics: 147
  • Year to date:
    • Site-wide: 22,401
  • Since beginning of last month:
    • Site-wide: 29,512

Graph Drawing-based Dimensionality Reduction to Identify Hidden Communities in Single-Cell Sequencing Spatial Representation

bioinformatics more details view paper
  • Downloaded 357 times
  • Download rankings, all-time:
    • Site-wide: 66,763
    • In bioinformatics: 6,495
  • Year to date:
    • Site-wide: 61,146
  • Since beginning of last month:
    • Site-wide: 36,758

Ontogeny and Vulnerabilities of Lapatinib Drug-Tolerant Persisters in HER2+ Breast Cancer

cancer biology more details view paper
  • Downloaded 302 times
  • Download rankings, all-time:
    • Site-wide: 76,598
    • In cancer biology: 2,259
  • Year to date:
    • Site-wide: 14,159
  • Since beginning of last month:
    • Site-wide: 15,859

iCellR: Combined Coverage Correction and Principal Component Alignment for Batch Alignment in Single-Cell Sequencing Analysis

bioinformatics more details view paper
  • Downloaded 230 times
  • Download rankings, all-time:
    • Site-wide: 91,383
    • In bioinformatics: 8,051
  • Year to date:
    • Site-wide: 78,619
  • Since beginning of last month:
    • Site-wide: 38,302

A Machine Learning approach for assessing drug development risk

bioinformatics more details view paper
  • Downloaded 215 times
  • Download rankings, all-time:
    • Site-wide: 94,490
    • In bioinformatics: 8,268
  • Year to date:
    • Site-wide: 5,011
  • Since beginning of last month:
    • Site-wide: 7,916

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