Author: Aristotelis Tsirigos

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Preprints

A bipartite element with allele-specific functions safeguards DNA methylation imprints at the Dlk1-Dio3 locus

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Classification and Mutation Prediction from Non-Small Cell Lung Cancer Histopathology Images using Deep Learning

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HiC-bench: comprehensive and reproducible Hi-C data analysis designed for parameter exploration and benchmarking

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lncRNA-screen: an interactive platform for computationally screening long non-coding RNAs in large genomics datasets

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KLF4 binding is involved in the organization and regulation of 3D enhancer networks during acquisition and maintenance of pluripotency

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Dynamic 3D chromosomal landscapes in acute leukemia

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Stratification of TAD boundaries identified in reproducible Hi-C contact matrices reveals preferential insulation of super-enhancers by strong boundaries

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NSD2 overexpression drives clustered chromatin and transcriptional changes in a subset of insulated domains

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ChIPSeqSpike: A R/Bioconductor package for ChIP-Seq data scaling according to spike-in control

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Defining the relative and combined contribution of CTCF and CTCFL to genomic regulation

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Efficient pan-cancer whole-slide image classification and outlier detection using convolutional neural networks

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N-BLR, a primate-specific non-coding transcript, modulates the epithelial-to-mesenchymal transition and leads to colorectal cancer invasion and migration

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The translatome of adult cortical axons is regulated by learning in vivo

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A Deep Learning Approach for Rapid Mutational Screening in Melanoma

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Context-dependent requirement of H3K9 methyltransferase activity during cellular reprogramming to iPSCs

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Graph Drawing-based Dimensionality Reduction to Identify Hidden Communities in Single-Cell Sequencing Spatial Representation

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iCellR: Combined Coverage Correction and Principal Component Alignment for Batch Alignment in Single-Cell Sequencing Analysis

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